RNA–Protein interactions for RNA: ENST00000641733.1

CASC19-255, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,385 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-255ENST00000641733 TBC1D2Q9BYX2 928 aa10.16□□□□□ -0.78
CASC19-255ENST00000641733 ZNF516Q92618 1163 aa10.15□□□□□ -0.78
CASC19-255ENST00000641733 KCTD17Q8N5Z5 321 aa10.14□□□□□ -0.79
CASC19-255ENST00000641733 SLC27A5Q9Y2P5 690 aa10.14□□□□□ -0.79
CASC19-255ENST00000641733 SALL2Q9Y467 1007 aaPredicted RBP10.14□□□□□ -0.79
CASC19-255ENST00000641733 GJA5P36382 358 aa10.14□□□□□ -0.79
CASC19-255ENST00000641733 FAM117AQ9C073 453 aa10.14□□□□□ -0.79
CASC19-255ENST00000641733 FMNL1O95466 1100 aaPredicted RBP10.13□□□□□ -0.79
CASC19-255ENST00000641733 FDX1P10109 184 aa10.13□□□□□ -0.79
CASC19-255ENST00000641733 MOXD2PA6NHM9 499 aa10.12□□□□□ -0.79
CASC19-255ENST00000641733 A6NJR5 290 aa10.12□□□□□ -0.79
CASC19-255ENST00000641733 ADH1BP00325 375 aa10.12□□□□□ -0.79
CASC19-255ENST00000641733 CCDC82Q8N4S0 544 aa10.12□□□□□ -0.79
CASC19-255ENST00000641733 SPSB2Q99619 263 aa10.11□□□□□ -0.79
CASC19-255ENST00000641733 GGCXP38435 758 aa10.1□□□□□ -0.79
CASC19-255ENST00000641733 MYSM1Q5VVJ2 828 aa10.1□□□□□ -0.79
CASC19-255ENST00000641733 HLA-CQ95604 372 aa10.1□□□□□ -0.79
CASC19-255ENST00000641733 SPTLC1O15269 473 aa10.09□□□□□ -0.79
CASC19-255ENST00000641733 TLL1O43897 1013 aa10.09□□□□□ -0.79
CASC19-255ENST00000641733 RSBN1LQ6PCB5 846 aaPredicted RBP10.09□□□□□ -0.79
CASC19-255ENST00000641733 BRICD5Q6PL45 260 aa10.09□□□□□ -0.79
CASC19-255ENST00000641733 THAP11Q96EK4 314 aa10.09□□□□□ -0.79
CASC19-255ENST00000641733 TRAK2O60296 914 aa10.08□□□□□ -0.8
CASC19-255ENST00000641733 NDUFV2P19404 249 aa10.08□□□□□ -0.8
CASC19-255ENST00000641733 GUCA2AQ02747 115 aa10.08□□□□□ -0.8
CASC19-255ENST00000641733 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
CASC19-255ENST00000641733 RIC3Q7Z5B4 369 aa10.08□□□□□ -0.8
CASC19-255ENST00000641733 A0A0G2JS52 829 aa10.07□□□□□ -0.8
CASC19-255ENST00000641733 PLEKHG3A1L390 1219 aa10.07□□□□□ -0.8
CASC19-255ENST00000641733 NKX2-3Q8TAU0 364 aa10.07□□□□□ -0.8
CASC19-255ENST00000641733 CLK2P49760 499 aaKnown RBP10.06□□□□□ -0.8
CASC19-255ENST00000641733 TUSC1Q2TAM9 212 aa10.06□□□□□ -0.8
CASC19-255ENST00000641733 RNF19BQ6ZMZ0 732 aa10.06□□□□□ -0.8
CASC19-255ENST00000641733 TRAIPQ9BWF2 469 aa10.06□□□□□ -0.8
CASC19-255ENST00000641733 SPDYE5A6NIY4 337 aa10.05□□□□□ -0.8
CASC19-255ENST00000641733 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
CASC19-255ENST00000641733 SKIV2LQ15477 1246 aaKnown RBP10.05□□□□□ -0.8
CASC19-255ENST00000641733 USB1Q9BQ65 265 aaKnown RBP10.05□□□□□ -0.8
CASC19-255ENST00000641733 SLC6A16Q9GZN6 736 aa10.05□□□□□ -0.8
CASC19-255ENST00000641733 GOPCQ9HD26 462 aa10.05□□□□□ -0.8
CASC19-255ENST00000641733 PCDHGC3Q9UN70 934 aa10.05□□□□□ -0.8
CASC19-255ENST00000641733 RAD21O60216 631 aa10.04□□□□□ -0.8
CASC19-255ENST00000641733 MTMR2Q13614 643 aa10.04□□□□□ -0.8
CASC19-255ENST00000641733 MSS51Q4VC12 460 aa10.04□□□□□ -0.8
CASC19-255ENST00000641733 PRPF38BQ5VTL8 546 aaKnown RBP10.04□□□□□ -0.8
CASC19-255ENST00000641733 RETREG3Q86VR2 466 aa10.04□□□□□ -0.8
CASC19-255ENST00000641733 CCDC97Q96F63 343 aaPredicted RBP10.03□□□□□ -0.8
CASC19-255ENST00000641733 ZBTB3Q9H5J0 574 aa10.03□□□□□ -0.8
CASC19-255ENST00000641733 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
CASC19-255ENST00000641733 POLR3EQ9NVU0 708 aa10.03□□□□□ -0.8
CASC19-255ENST00000641733 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.8
CASC19-255ENST00000641733 LIMD1Q9UGP4 676 aa10.02□□□□□ -0.8
CASC19-255ENST00000641733 ATP1B4Q9UN42 357 aaPredicted RBP10.02□□□□□ -0.8
CASC19-255ENST00000641733 S1PR4O95977 384 aa10.01□□□□□ -0.81
CASC19-255ENST00000641733 SERPINA10Q9UK55 444 aa10.01□□□□□ -0.81
CASC19-255ENST00000641733 CSPP1Q1MSJ5 1256 aa10.01□□□□□ -0.81
CASC19-255ENST00000641733 AEBP1Q8IUX7 1158 aa10.01□□□□□ -0.81
CASC19-255ENST00000641733 FAM160A2Q8N612 972 aaPredicted RBP10.01□□□□□ -0.81
CASC19-255ENST00000641733 PCMTD1Q96MG8 357 aaPredicted RBP10.01□□□□□ -0.81
CASC19-255ENST00000641733 PCDHB15Q9Y5E8 787 aa10.01□□□□□ -0.81
CASC19-255ENST00000641733 SYMPKQ92797 1274 aaKnown RBP10□□□□□ -0.81
CASC19-255ENST00000641733 NUTM2BA6NNL0 878 aaPredicted RBP9.99□□□□□ -0.81
CASC19-255ENST00000641733 NUTM2EB1AL46 878 aaPredicted RBP9.99□□□□□ -0.81
CASC19-255ENST00000641733 NUTM2DQ5VT03 806 aaPredicted RBP9.99□□□□□ -0.81
CASC19-255ENST00000641733 NUTM2AQ8IVF1 878 aaPredicted RBP9.99□□□□□ -0.81
CASC19-255ENST00000641733 CLUAP1Q96AJ1 413 aa9.99□□□□□ -0.81
CASC19-255ENST00000641733 TMCO4Q5TGY1 634 aa9.98□□□□□ -0.81
CASC19-255ENST00000641733 ANKLE1Q8NAG6 615 aa9.98□□□□□ -0.81
CASC19-255ENST00000641733 RNF223E7ERA6 249 aa9.97□□□□□ -0.81
CASC19-255ENST00000641733 LILRB3O75022 631 aa9.97□□□□□ -0.81
CASC19-255ENST00000641733 RGS20O76081 388 aa9.97□□□□□ -0.81
CASC19-255ENST00000641733 MMP16P51512 607 aa9.97□□□□□ -0.81
CASC19-255ENST00000641733 PRR7Q8TB68 274 aa9.97□□□□□ -0.81
CASC19-255ENST00000641733 DXOO77932 396 aaKnown RBP9.96□□□□□ -0.82
CASC19-255ENST00000641733 JUNDP17535 347 aa9.96□□□□□ -0.82
CASC19-255ENST00000641733 QPCTQ16769 361 aa9.96□□□□□ -0.82
CASC19-255ENST00000641733 DESI1Q6ICB0 168 aa9.96□□□□□ -0.82
CASC19-255ENST00000641733 CABLES1Q8TDN4 633 aa9.96□□□□□ -0.82
CASC19-255ENST00000641733 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.82
CASC19-255ENST00000641733 PRDM9Q9NQV7 894 aa9.96□□□□□ -0.82
CASC19-255ENST00000641733 PROCA1Q8NCQ7 364 aaPredicted RBP9.94□□□□□ -0.82
CASC19-255ENST00000641733 SHROOM4Q9ULL8 1493 aa9.94□□□□□ -0.82
CASC19-255ENST00000641733 PDE4CQ08493 712 aa9.93□□□□□ -0.82
CASC19-255ENST00000641733 PROSER2Q86WR7 435 aaPredicted RBP9.93□□□□□ -0.82
CASC19-255ENST00000641733 HELBQ8NG08 1087 aaPredicted RBP9.93□□□□□ -0.82
CASC19-255ENST00000641733 FCF1Q9Y324 198 aaKnown RBP9.93□□□□□ -0.82
CASC19-255ENST00000641733 ZNF777Q9ULD5 760 aaPredicted RBP9.92□□□□□ -0.82
CASC19-255ENST00000641733 CFAP99D6REC4 459 aa9.91□□□□□ -0.82
CASC19-255ENST00000641733 PPEF1O14829 653 aaPredicted RBP9.91□□□□□ -0.82
CASC19-255ENST00000641733 PPP2R2DQ66LE6 453 aa9.91□□□□□ -0.82
CASC19-255ENST00000641733 PTPRNQ16849 979 aa9.9□□□□□ -0.82
CASC19-255ENST00000641733 RTL5Q5HYW3 569 aaPredicted RBP9.9□□□□□ -0.82
CASC19-255ENST00000641733 TSC1Q92574 1164 aa9.9□□□□□ -0.82
CASC19-255ENST00000641733 NUDT12Q9BQG2 462 aa9.89□□□□□ -0.83
CASC19-255ENST00000641733 PATL2C9JE40 543 aaKnown RBP9.88□□□□□ -0.83
CASC19-255ENST00000641733 MCM6Q14566 821 aa9.88□□□□□ -0.83
CASC19-255ENST00000641733 RGS22Q8NE09 1264 aa9.88□□□□□ -0.83
CASC19-255ENST00000641733 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
CASC19-255ENST00000641733 ZBTB24O43167 697 aaPredicted RBP9.88□□□□□ -0.83
CASC19-255ENST00000641733 CCNYL3P0C7X3 344 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms