RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 C19orf44Q9H6X5 657 aa14.35□□□□□ -0.11
PHGDH-224ENST00000641711 SBNO2Q9Y2G9 1366 aa14.34□□□□□ -0.11
PHGDH-224ENST00000641711 TOM1O60784 492 aa14.33□□□□□ -0.12
PHGDH-224ENST00000641711 CADPS2Q86UW7 1296 aa14.33□□□□□ -0.12
PHGDH-224ENST00000641711 QRICH2Q9H0J4 1663 aa14.33□□□□□ -0.12
PHGDH-224ENST00000641711 FMN2Q9NZ56 1722 aa14.32□□□□□ -0.12
PHGDH-224ENST00000641711 NBPF1Q3BBV0 1214 aa14.32□□□□□ -0.12
PHGDH-224ENST00000641711 STK26Q9P289 416 aa14.32□□□□□ -0.12
PHGDH-224ENST00000641711 C14orf37Q86TY3 774 aa14.31□□□□□ -0.12
PHGDH-224ENST00000641711 TRAK1Q9UPV9 953 aa14.31□□□□□ -0.12
PHGDH-224ENST00000641711 DDX10Q13206 875 aaKnown RBP14.3□□□□□ -0.12
PHGDH-224ENST00000641711 PRAM1Q96QH2 718 aa14.3□□□□□ -0.12
PHGDH-224ENST00000641711 CARD11Q9BXL7 1154 aa14.3□□□□□ -0.12
PHGDH-224ENST00000641711 POGKQ9P215 609 aa14.3□□□□□ -0.12
PHGDH-224ENST00000641711 CENPJQ9HC77 1338 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-224ENST00000641711 SLC24A1O60721 1099 aa14.29□□□□□ -0.12
PHGDH-224ENST00000641711 ATF3P18847 181 aa14.29□□□□□ -0.12
PHGDH-224ENST00000641711 EIF4G2P78344 907 aaKnown RBP eCLIP14.29□□□□□ -0.127e-14■■■■■ 63.8
PHGDH-224ENST00000641711 FBXO41Q8TF61 875 aa14.29□□□□□ -0.12
PHGDH-224ENST00000641711 PLEKHH1Q9ULM0 1364 aa14.29□□□□□ -0.12
PHGDH-224ENST00000641711 ANKARQ7Z5J8 1434 aa14.29□□□□□ -0.12
PHGDH-224ENST00000641711 HSPA5P11021 654 aaKnown RBP14.28□□□□□ -0.12
PHGDH-224ENST00000641711 MST1RQ04912 1400 aa14.28□□□□□ -0.12
PHGDH-224ENST00000641711 ITSN1Q15811 1721 aa14.28□□□□□ -0.12
PHGDH-224ENST00000641711 KIF1AQ12756 1690 aa14.27□□□□□ -0.12
PHGDH-224ENST00000641711 TULP4Q9NRJ4 1543 aa14.27□□□□□ -0.12
PHGDH-224ENST00000641711 SCAF1Q9H7N4 1312 aaKnown RBP14.27□□□□□ -0.12
PHGDH-224ENST00000641711 UBAP1LF5GYI3 381 aa14.27□□□□□ -0.13
PHGDH-224ENST00000641711 WAPLQ7Z5K2 1190 aa14.27□□□□□ -0.13
PHGDH-224ENST00000641711 HIRIP3Q9BW71 556 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-224ENST00000641711 ROBO1Q9Y6N7 1651 aa14.26□□□□□ -0.13
PHGDH-224ENST00000641711 C1orf167Q5SNV9 1468 aa14.25□□□□□ -0.13
PHGDH-224ENST00000641711 USP47Q96K76 1375 aa14.24□□□□□ -0.13
PHGDH-224ENST00000641711 TOPAZ1Q8N9V7 1692 aa14.23□□□□□ -0.13
PHGDH-224ENST00000641711 AHDC1Q5TGY3 1603 aaPredicted RBP14.23□□□□□ -0.13
PHGDH-224ENST00000641711 CCER2I3L3R5 266 aa14.23□□□□□ -0.13
PHGDH-224ENST00000641711 RBM33Q96EV2 1170 aaKnown RBP14.23□□□□□ -0.13
PHGDH-224ENST00000641711 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
PHGDH-224ENST00000641711 SLAIN2Q9P270 581 aa14.23□□□□□ -0.13
PHGDH-224ENST00000641711 NHSL1Q5SYE7 1610 aa14.23□□□□□ -0.13
PHGDH-224ENST00000641711 USP32Q8NFA0 1604 aa14.22□□□□□ -0.13
PHGDH-224ENST00000641711 WASHC2AQ641Q2 1341 aa14.21□□□□□ -0.13
PHGDH-224ENST00000641711 MINK1Q8N4C8 1332 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-224ENST00000641711 ATP7BP35670 1465 aa14.21□□□□□ -0.13
PHGDH-224ENST00000641711 WASLO00401 505 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-224ENST00000641711 EVC2Q86UK5 1308 aa14.2□□□□□ -0.14
PHGDH-224ENST00000641711 RGPD8O14715 1765 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-224ENST00000641711 ANP32CO43423 234 aa14.2□□□□□ -0.14
PHGDH-224ENST00000641711 SAFB2Q14151 953 aaKnown RBP eCLIP14.2□□□□□ -0.14
PHGDH-224ENST00000641711 PUS7Q96PZ0 661 aaKnown RBP14.2□□□□□ -0.14
PHGDH-224ENST00000641711 CCDC7Q96M83 1385 aa14.19□□□□□ -0.14
PHGDH-224ENST00000641711 ATAD2Q6PL18 1390 aa14.18□□□□□ -0.14
PHGDH-224ENST00000641711 BRINP3Q76B58 766 aa14.17□□□□□ -0.14
PHGDH-224ENST00000641711 PHLPP1O60346 1717 aa14.17□□□□□ -0.14
PHGDH-224ENST00000641711 TESK2Q96S53 571 aa14.16□□□□□ -0.14
PHGDH-224ENST00000641711 NINLQ9Y2I6 1382 aa14.16□□□□□ -0.14
PHGDH-224ENST00000641711 COL16A1Q07092 1604 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-224ENST00000641711 ST20-MTHFSA0A0A6YYL1 179 aa14.15□□□□□ -0.14
PHGDH-224ENST00000641711 CDCA8Q53HL2 280 aa14.15□□□□□ -0.14
PHGDH-224ENST00000641711 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.15
PHGDH-224ENST00000641711 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
PHGDH-224ENST00000641711 CDK19Q9BWU1 502 aa14.14□□□□□ -0.15
PHGDH-224ENST00000641711 BRD4O60885 1362 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-224ENST00000641711 C11orf95C9JLR9 678 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-224ENST00000641711 CCDC61Q9Y6R9 512 aa14.13□□□□□ -0.15
PHGDH-224ENST00000641711 PRR36Q9H6K5 1346 aa14.13□□□□□ -0.15
PHGDH-224ENST00000641711 SHPRHQ149N8 1683 aa14.12□□□□□ -0.15
PHGDH-224ENST00000641711 SRPK2P78362 688 aaKnown RBP14.12□□□□□ -0.15
PHGDH-224ENST00000641711 TMF1P82094 1093 aa14.12□□□□□ -0.15
PHGDH-224ENST00000641711 NUDT16Q96DE0 195 aaKnown RBP14.12□□□□□ -0.15
PHGDH-224ENST00000641711 PHF8Q9UPP1 1060 aa14.12□□□□□ -0.15
PHGDH-224ENST00000641711 GTF3C3Q9Y5Q9 886 aa14.12□□□□□ -0.15
PHGDH-224ENST00000641711 AKAP12Q02952 1782 aa14.11□□□□□ -0.15
PHGDH-224ENST00000641711 POLR3AO14802 1390 aaPredicted RBP14.11□□□□□ -0.15
PHGDH-224ENST00000641711 ESCO1Q5FWF5 840 aa14.11□□□□□ -0.15
PHGDH-224ENST00000641711 PXDNQ92626 1479 aa14.11□□□□□ -0.15
PHGDH-224ENST00000641711 KIF7Q2M1P5 1343 aa14.11□□□□□ -0.15
PHGDH-224ENST00000641711 PPIP5K1Q6PFW1 1433 aa14.1□□□□□ -0.15
PHGDH-224ENST00000641711 PLEKHG3A1L390 1219 aa14.1□□□□□ -0.15
PHGDH-224ENST00000641711 ORAI2Q96SN7 254 aa14.1□□□□□ -0.15
PHGDH-224ENST00000641711 SOS2Q07890 1332 aaPredicted RBP14.1□□□□□ -0.15
PHGDH-224ENST00000641711 TRPM3Q9HCF6 1732 aaPredicted RBP14.1□□□□□ -0.15
PHGDH-224ENST00000641711 MON2Q7Z3U7 1717 aa14.09□□□□□ -0.15
PHGDH-224ENST00000641711 SBNO1A3KN83 1393 aa14.09□□□□□ -0.15
PHGDH-224ENST00000641711 COL22A1Q8NFW1 1626 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-224ENST00000641711 DISP3Q9P2K9 1392 aa14.08□□□□□ -0.16
PHGDH-224ENST00000641711 MYOM1P52179 1685 aa14.07□□□□□ -0.16
PHGDH-224ENST00000641711 NUTM2FA1L443 756 aa14.07□□□□□ -0.16
PHGDH-224ENST00000641711 CABP2Q9NPB3 220 aa14.07□□□□□ -0.16
PHGDH-224ENST00000641711 ALS2Q96Q42 1657 aa14.07□□□□□ -0.16
PHGDH-224ENST00000641711 JCADQ9P266 1359 aa14.07□□□□□ -0.16
PHGDH-224ENST00000641711 NRKQ7Z2Y5 1582 aa14.06□□□□□ -0.16
PHGDH-224ENST00000641711 HSPA1LP34931 641 aa14.06□□□□□ -0.16
PHGDH-224ENST00000641711 PSME1Q06323 249 aa14.06□□□□□ -0.16
PHGDH-224ENST00000641711 ILDR1Q86SU0 546 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-224ENST00000641711 LRRC59Q96AG4 307 aaKnown RBP14.06□□□□□ -0.16
PHGDH-224ENST00000641711 CPSF1Q10570 1443 aaKnown RBP14.06□□□□□ -0.16
PHGDH-224ENST00000641711 TNS3Q68CZ2 1445 aa14.06□□□□□ -0.16
PHGDH-224ENST00000641711 MED1Q15648 1581 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-224ENST00000641711 ARHGEF10O15013 1369 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms