RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 NASPP49321 788 aaPredicted RBP23.8■■□□□ 1.4
KCNMA1-293ENST00000640969 NEUROD6Q96NK8 337 aa23.8■■□□□ 1.4
KCNMA1-293ENST00000640969 NAT10Q9H0A0 1025 aaKnown RBP23.8■■□□□ 1.4
KCNMA1-293ENST00000640969 R3HCC1Q9Y3T6 440 aaKnown RBP23.8■■□□□ 1.4
KCNMA1-293ENST00000640969 RRP12Q5JTH9 1297 aaKnown RBP23.8■■□□□ 1.4
KCNMA1-293ENST00000640969 WASHC4Q2M389 1173 aa23.8■■□□□ 1.4
KCNMA1-293ENST00000640969 PDILTQ8N807 584 aa23.8■■□□□ 1.4
KCNMA1-293ENST00000640969 MRE11P49959 708 aa23.79■■□□□ 1.4
KCNMA1-293ENST00000640969 PSME1Q06323 249 aa23.79■■□□□ 1.4
KCNMA1-293ENST00000640969 NINLQ9Y2I6 1382 aa23.79■■□□□ 1.4
KCNMA1-293ENST00000640969 HSP90B2PQ58FF3 399 aa23.78■■□□□ 1.4
KCNMA1-293ENST00000640969 CT47A1Q5JQC4 288 aaPredicted RBP23.78■■□□□ 1.4
KCNMA1-293ENST00000640969 RIC3Q7Z5B4 369 aa23.78■■□□□ 1.4
KCNMA1-293ENST00000640969 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.78■■□□□ 1.4
KCNMA1-293ENST00000640969 AAMPQ13685 434 aa23.77■■□□□ 1.4
KCNMA1-293ENST00000640969 NOM1Q5C9Z4 860 aaKnown RBP23.77■■□□□ 1.4
KCNMA1-293ENST00000640969 CCDC7Q96M83 1385 aa23.77■■□□□ 1.4
KCNMA1-293ENST00000640969 RNF214Q8ND24 703 aa23.76■■□□□ 1.39
KCNMA1-293ENST00000640969 BRMS1Q9HCU9 246 aa23.76■■□□□ 1.39
KCNMA1-293ENST00000640969 UBTFL1P0CB47 393 aaPredicted RBP23.76■■□□□ 1.39
KCNMA1-293ENST00000640969 AIMP1Q12904 312 aaKnown RBP23.76■■□□□ 1.39
KCNMA1-293ENST00000640969 FYB1O15117 783 aa23.75■■□□□ 1.39
KCNMA1-293ENST00000640969 KIF7Q2M1P5 1343 aa23.75■■□□□ 1.39
KCNMA1-293ENST00000640969 WIZO95785 1651 aa23.75■■□□□ 1.39
KCNMA1-293ENST00000640969 PSMA5P28066 241 aa23.75■■□□□ 1.39
KCNMA1-293ENST00000640969 CAGE1Q8TC20 777 aa23.74■■□□□ 1.39
KCNMA1-293ENST00000640969 CNTROBQ8N137 903 aa23.74■■□□□ 1.39
KCNMA1-293ENST00000640969 SDF4Q9BRK5 362 aa23.74■■□□□ 1.39
KCNMA1-293ENST00000640969 CCDC27Q2M243 656 aa23.73■■□□□ 1.39
KCNMA1-293ENST00000640969 EPS15P42566 896 aa23.73■■□□□ 1.39
KCNMA1-293ENST00000640969 CNTLNQ9NXG0 1405 aa23.73■■□□□ 1.39
KCNMA1-293ENST00000640969 SAMD1Q6SPF0 538 aaPredicted RBP23.73■■□□□ 1.39
KCNMA1-293ENST00000640969 KDM4AO75164 1064 aa23.73■■□□□ 1.39
KCNMA1-293ENST00000640969 ODF2Q5BJF6 829 aa23.72■■□□□ 1.39
KCNMA1-293ENST00000640969 LETM1O95202 739 aaPredicted RBP23.71■■□□□ 1.39
KCNMA1-293ENST00000640969 RBM33Q96EV2 1170 aaKnown RBP23.71■■□□□ 1.39
KCNMA1-293ENST00000640969 FSD1Q9BTV5 496 aa23.71■■□□□ 1.39
KCNMA1-293ENST00000640969 CAVIN1Q6NZI2 390 aaKnown RBP23.71■■□□□ 1.39
KCNMA1-293ENST00000640969 TRAK2O60296 914 aa23.7■■□□□ 1.38
KCNMA1-293ENST00000640969 XBP1P17861 261 aa23.7■■□□□ 1.38
KCNMA1-293ENST00000640969 TTLL5Q6EMB2 1281 aa23.7■■□□□ 1.38
KCNMA1-293ENST00000640969 OFD1O75665 1012 aa23.7■■□□□ 1.38
KCNMA1-293ENST00000640969 GGNBP2Q9H3C7 697 aa23.7■■□□□ 1.38
KCNMA1-293ENST00000640969 TRIM5Q9C035 493 aa23.69■■□□□ 1.38
KCNMA1-293ENST00000640969 RAPGEF4Q8WZA2 1011 aa23.69■■□□□ 1.38
KCNMA1-293ENST00000640969 CADPSQ9ULU8 1353 aa23.69■■□□□ 1.38
KCNMA1-293ENST00000640969 CNKSR2Q8WXI2 1034 aa23.69■■□□□ 1.38
KCNMA1-293ENST00000640969 HSP90AB2PQ58FF8 381 aa23.68■■□□□ 1.38
KCNMA1-293ENST00000640969 TSPY26PQ9H489 355 aa23.68■■□□□ 1.38
KCNMA1-293ENST00000640969 CCDC173Q0VFZ6 552 aa23.68■■□□□ 1.38
KCNMA1-293ENST00000640969 PTPRGP23470 1445 aa23.68■■□□□ 1.38
KCNMA1-293ENST00000640969 SMC2O95347 1197 aa23.67■■□□□ 1.38
KCNMA1-293ENST00000640969 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.67■■□□□ 1.385e-14■■■■■ 211.5
KCNMA1-293ENST00000640969 CALRP27797 417 aaKnown RBP23.67■■□□□ 1.38
KCNMA1-293ENST00000640969 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
KCNMA1-293ENST00000640969 MTMR7Q9Y216 660 aa23.67■■□□□ 1.38
KCNMA1-293ENST00000640969 ERCC4Q92889 916 aaPredicted RBP23.66■■□□□ 1.38
KCNMA1-293ENST00000640969 CWC22Q9HCG8 908 aaKnown RBP23.65■■□□□ 1.38
KCNMA1-293ENST00000640969 ZFYVE27Q5T4F4 411 aa23.65■■□□□ 1.38
KCNMA1-293ENST00000640969 CABP2Q9NPB3 220 aa23.65■■□□□ 1.38
KCNMA1-293ENST00000640969 MBD3O95983 291 aa23.65■■□□□ 1.38
KCNMA1-293ENST00000640969 ADAMTS8Q9UP79 889 aa23.64■■□□□ 1.38
KCNMA1-293ENST00000640969 PRPF40AO75400 957 aaKnown RBP23.64■■□□□ 1.38
KCNMA1-293ENST00000640969 MTERF4Q7Z6M4 381 aaKnown RBP23.64■■□□□ 1.38
KCNMA1-293ENST00000640969 KINO60870 393 aaKnown RBP23.64■■□□□ 1.37
KCNMA1-293ENST00000640969 DNAJC2Q99543 621 aaKnown RBP23.63■■□□□ 1.37
KCNMA1-293ENST00000640969 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
KCNMA1-293ENST00000640969 BRD4O60885 1362 aaPredicted RBP23.63■■□□□ 1.37
KCNMA1-293ENST00000640969 NEK4P51957 841 aa23.63■■□□□ 1.37
KCNMA1-293ENST00000640969 CLASRPQ8N2M8 674 aaKnown RBP23.63■■□□□ 1.37
KCNMA1-293ENST00000640969 CWC15Q9P013 229 aaKnown RBP23.62■■□□□ 1.37
KCNMA1-293ENST00000640969 SURF6O75683 361 aaKnown RBP23.62■■□□□ 1.37
KCNMA1-293ENST00000640969 DCTN1Q14203 1278 aa23.62■■□□□ 1.37
KCNMA1-293ENST00000640969 SART3Q15020 963 aaKnown RBP23.61■■□□□ 1.37
KCNMA1-293ENST00000640969 MAP7D2Q96T17 732 aa23.61■■□□□ 1.37
KCNMA1-293ENST00000640969 PDZRN3Q9UPQ7 1066 aa23.61■■□□□ 1.37
KCNMA1-293ENST00000640969 RUSC2Q8N2Y8 1516 aa23.61■■□□□ 1.37
KCNMA1-293ENST00000640969 GNAI3P08754 354 aa23.61■■□□□ 1.37
KCNMA1-293ENST00000640969 H0YHG0 523 aa23.61■■□□□ 1.37
KCNMA1-293ENST00000640969 NUTM2GQ5VZR2 741 aa23.61■■□□□ 1.37
KCNMA1-293ENST00000640969 SMARCE1Q969G3 411 aa23.6■■□□□ 1.37
KCNMA1-293ENST00000640969 CCDC30Q5VVM6 783 aa23.6■■□□□ 1.37
KCNMA1-293ENST00000640969 NLRP2Q9NX02 1062 aa23.6■■□□□ 1.37
KCNMA1-293ENST00000640969 TBC1D2BQ9UPU7 963 aa23.6■■□□□ 1.37
KCNMA1-293ENST00000640969 ATP2B1P20020 1258 aa23.59■■□□□ 1.37
KCNMA1-293ENST00000640969 FMNL2Q96PY5 1086 aa23.59■■□□□ 1.37
KCNMA1-293ENST00000640969 CCP110O43303 1012 aa23.59■■□□□ 1.37
KCNMA1-293ENST00000640969 RABEP1Q15276 862 aa23.59■■□□□ 1.37
KCNMA1-293ENST00000640969 SKIDA1Q1XH10 827 aa23.59■■□□□ 1.37
KCNMA1-293ENST00000640969 FILIP1LQ4L180 1135 aa23.59■■□□□ 1.37
KCNMA1-293ENST00000640969 MYO6Q9UM54 1294 aa23.59■■□□□ 1.37
KCNMA1-293ENST00000640969 MCM2P49736 904 aa23.58■■□□□ 1.37
KCNMA1-293ENST00000640969 MEX3CQ5U5Q3 659 aaKnown RBP23.58■■□□□ 1.37
KCNMA1-293ENST00000640969 CDCA7LQ96GN5 454 aa23.58■■□□□ 1.37
KCNMA1-293ENST00000640969 ZNF396Q96N95 335 aaPredicted RBP23.58■■□□□ 1.36
KCNMA1-293ENST00000640969 TCP11L2Q8N4U5 519 aa23.57■■□□□ 1.36
KCNMA1-293ENST00000640969 C1orf115Q9H7X2 142 aa23.57■■□□□ 1.36
KCNMA1-293ENST00000640969 MAGEC2Q9UBF1 373 aaPredicted RBP23.57■■□□□ 1.36
KCNMA1-293ENST00000640969 HIP1O00291 1037 aa23.57■■□□□ 1.36
KCNMA1-293ENST00000640969 FIBPO43427 364 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms