RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 GJA5P36382 358 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 ATN1P54259 1190 aaPredicted RBP3.89□□□□□ -1.79
HMHB1-202ENST00000638299 MARSP56192 900 aaKnown RBP3.89□□□□□ -1.79
HMHB1-202ENST00000638299 SEMA3FQ13275 785 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 ELOAQ14241 798 aaKnown RBP3.89□□□□□ -1.79
HMHB1-202ENST00000638299 DHX37Q8IY37 1157 aaKnown RBP3.89□□□□□ -1.79
HMHB1-202ENST00000638299 RBM46Q8TBY0 533 aaKnown RBP3.89□□□□□ -1.79
HMHB1-202ENST00000638299 TSC1Q92574 1164 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 SPATA32Q96LK8 384 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 C8orf37Q96NL8 207 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 ZBTB3Q9H5J0 574 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 OCEL1Q9H607 264 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 CWC22Q9HCG8 908 aaKnown RBP3.89□□□□□ -1.79
HMHB1-202ENST00000638299 CADPSQ9ULU8 1353 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.88□□□□□ -1.79
HMHB1-202ENST00000638299 CFAP99D6REC4 459 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 GALR2O43603 387 aaPredicted RBP3.88□□□□□ -1.79
HMHB1-202ENST00000638299 ERCC3P19447 782 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 PRSS12P56730 875 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 NAALADL2Q58DX5 795 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 PRPF38BQ5VTL8 546 aaKnown RBP3.88□□□□□ -1.79
HMHB1-202ENST00000638299 B4GALNT3Q6L9W6 998 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 CDCA7LQ96GN5 454 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 EYA1Q99502 592 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 RECKO95980 971 aa3.87□□□□□ -1.79
HMHB1-202ENST00000638299 FDX1P10109 184 aa3.87□□□□□ -1.79
HMHB1-202ENST00000638299 FAM69CQ0P6D2 419 aa3.87□□□□□ -1.79
HMHB1-202ENST00000638299 NR6A1Q15406 480 aa3.87□□□□□ -1.79
HMHB1-202ENST00000638299 CRTC2Q53ET0 693 aaPredicted RBP3.87□□□□□ -1.79
HMHB1-202ENST00000638299 DEPDC4Q8N2C3 294 aa3.87□□□□□ -1.79
HMHB1-202ENST00000638299 POLR3GLQ9BT43 218 aa3.87□□□□□ -1.79
HMHB1-202ENST00000638299 BIN2Q9UBW5 565 aaPredicted RBP3.87□□□□□ -1.79
HMHB1-202ENST00000638299 HOXA2O43364 376 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 KDM4AO75164 1064 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 SOX11P35716 441 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 FOSBP53539 338 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 C9orf131Q5VYM1 1079 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 GIMAP6Q6P9H5 292 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 ZNF662Q6ZS27 426 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 FBXO33Q7Z6M2 555 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 POTEDQ86YR6 584 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 CERKQ8TCT0 537 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 ADAM33Q9BZ11 813 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 KDM4FA0A1W2PPD8 638 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L3A6NCW0 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L4A6NCW7 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L15C9J2P7 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L10C9JJH3 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L13C9JLJ4 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L12C9JPN9 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L11C9JVI0 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L21D6R901 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L18D6R9N7 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L22D6RA61 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L17D6RBQ6 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L19D6RCP7 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L20D6RJB6 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 PER1O15534 1290 aaPredicted RBP3.85□□□□□ -1.79
HMHB1-202ENST00000638299 SLC34A2O95436 690 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 SKIP12755 728 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 COL9A1P20849 921 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 ZC3H6P61129 1189 aaKnown RBP3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L24Q0WX57 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L2Q6R6M4 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 NUDT18Q6ZVK8 323 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L1Q7RTZ2 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 SULF1Q8IWU6 871 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 RDH13Q8NBN7 331 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 FAM174AQ8TBP5 190 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 SYMPKQ92797 1274 aaKnown RBP3.85□□□□□ -1.79
HMHB1-202ENST00000638299 JPH4Q96JJ6 628 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 ANO2Q9NQ90 1003 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 RBM27Q9P2N5 1060 aaKnown RBP3.85□□□□□ -1.79
HMHB1-202ENST00000638299 TSKSQ9UJT2 592 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L5A8MUK1 530 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 ATP2B4P23634 1241 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 VAMP1P23763 118 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 PTK7Q13308 1070 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 ZNF211Q13398 564 aaPredicted RBP3.84□□□□□ -1.79
HMHB1-202ENST00000638299 TSNAXIP1Q2TAA8 658 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 ZNF326Q5BKZ1 582 aaKnown RBP3.84□□□□□ -1.79
HMHB1-202ENST00000638299 ZNF454Q8N9F8 522 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 UBXN4Q92575 508 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 CLP1Q92989 425 aaKnown RBP3.84□□□□□ -1.79
HMHB1-202ENST00000638299 ZDHHC16Q969W1 377 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 PCDHGA4Q9Y5G9 962 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 SMAPO00193 183 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 ATMINO43313 823 aaPredicted RBP3.83□□□□□ -1.8
HMHB1-202ENST00000638299 ABL1P00519 1130 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 DNAJB2P25686 324 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 GCGRP47871 477 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 EIF4G2P78344 907 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMHB1-202ENST00000638299 MTMR2Q13614 643 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 DPH6Q7L8W6 267 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 SLF2Q8IX21 1173 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 HELBQ8NG08 1087 aaPredicted RBP3.83□□□□□ -1.8
HMHB1-202ENST00000638299 TMEM134Q9H6X4 195 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 MKRN1Q9UHC7 482 aaKnown RBP3.83□□□□□ -1.8
HMHB1-202ENST00000638299 ANKRD62A6NC57 917 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 FAM196BA6NMK8 535 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms