RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 GJA5P36382 358 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 ATN1P54259 1190 aaPredicted RBP3.89□□□□□ -1.79
HMHB1-202ENST00000638299 MARSP56192 900 aaKnown RBP3.89□□□□□ -1.79
HMHB1-202ENST00000638299 SEMA3FQ13275 785 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 ELOAQ14241 798 aaKnown RBP3.89□□□□□ -1.79
HMHB1-202ENST00000638299 DHX37Q8IY37 1157 aaKnown RBP3.89□□□□□ -1.79
HMHB1-202ENST00000638299 RBM46Q8TBY0 533 aaKnown RBP3.89□□□□□ -1.79
HMHB1-202ENST00000638299 TSC1Q92574 1164 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 SPATA32Q96LK8 384 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 C8orf37Q96NL8 207 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 ZBTB3Q9H5J0 574 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 OCEL1Q9H607 264 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 CWC22Q9HCG8 908 aaKnown RBP3.89□□□□□ -1.79
HMHB1-202ENST00000638299 CADPSQ9ULU8 1353 aa3.89□□□□□ -1.79
HMHB1-202ENST00000638299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.88□□□□□ -1.79
HMHB1-202ENST00000638299 CFAP99D6REC4 459 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 GALR2O43603 387 aaPredicted RBP3.88□□□□□ -1.79
HMHB1-202ENST00000638299 ERCC3P19447 782 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 PRSS12P56730 875 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 NAALADL2Q58DX5 795 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 PRPF38BQ5VTL8 546 aaKnown RBP3.88□□□□□ -1.79
HMHB1-202ENST00000638299 B4GALNT3Q6L9W6 998 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 CDCA7LQ96GN5 454 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 EYA1Q99502 592 aa3.88□□□□□ -1.79
HMHB1-202ENST00000638299 RECKO95980 971 aa3.87□□□□□ -1.79
HMHB1-202ENST00000638299 FDX1P10109 184 aa3.87□□□□□ -1.79
HMHB1-202ENST00000638299 FAM69CQ0P6D2 419 aa3.87□□□□□ -1.79
HMHB1-202ENST00000638299 NR6A1Q15406 480 aa3.87□□□□□ -1.79
HMHB1-202ENST00000638299 CRTC2Q53ET0 693 aaPredicted RBP3.87□□□□□ -1.79
HMHB1-202ENST00000638299 DEPDC4Q8N2C3 294 aa3.87□□□□□ -1.79
HMHB1-202ENST00000638299 POLR3GLQ9BT43 218 aa3.87□□□□□ -1.79
HMHB1-202ENST00000638299 BIN2Q9UBW5 565 aaPredicted RBP3.87□□□□□ -1.79
HMHB1-202ENST00000638299 HOXA2O43364 376 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 KDM4AO75164 1064 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 SOX11P35716 441 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 FOSBP53539 338 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 C9orf131Q5VYM1 1079 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 GIMAP6Q6P9H5 292 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 ZNF662Q6ZS27 426 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 FBXO33Q7Z6M2 555 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 POTEDQ86YR6 584 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 CERKQ8TCT0 537 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 ADAM33Q9BZ11 813 aa3.86□□□□□ -1.79
HMHB1-202ENST00000638299 KDM4FA0A1W2PPD8 638 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L3A6NCW0 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L4A6NCW7 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L15C9J2P7 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L10C9JJH3 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L13C9JLJ4 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L12C9JPN9 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L11C9JVI0 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L21D6R901 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L18D6R9N7 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L22D6RA61 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L17D6RBQ6 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L19D6RCP7 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L20D6RJB6 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 PER1O15534 1290 aaPredicted RBP3.85□□□□□ -1.79
HMHB1-202ENST00000638299 SLC34A2O95436 690 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 SKIP12755 728 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 COL9A1P20849 921 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 ZC3H6P61129 1189 aaKnown RBP3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L24Q0WX57 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L2Q6R6M4 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 NUDT18Q6ZVK8 323 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L1Q7RTZ2 530 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 SULF1Q8IWU6 871 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 RDH13Q8NBN7 331 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 FAM174AQ8TBP5 190 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 SYMPKQ92797 1274 aaKnown RBP3.85□□□□□ -1.79
HMHB1-202ENST00000638299 JPH4Q96JJ6 628 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 ANO2Q9NQ90 1003 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 RBM27Q9P2N5 1060 aaKnown RBP3.85□□□□□ -1.79
HMHB1-202ENST00000638299 TSKSQ9UJT2 592 aa3.85□□□□□ -1.79
HMHB1-202ENST00000638299 USP17L5A8MUK1 530 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 ATP2B4P23634 1241 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 VAMP1P23763 118 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 PTK7Q13308 1070 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 ZNF211Q13398 564 aaPredicted RBP3.84□□□□□ -1.79
HMHB1-202ENST00000638299 TSNAXIP1Q2TAA8 658 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 ZNF326Q5BKZ1 582 aaKnown RBP3.84□□□□□ -1.79
HMHB1-202ENST00000638299 ZNF454Q8N9F8 522 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 UBXN4Q92575 508 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 CLP1Q92989 425 aaKnown RBP3.84□□□□□ -1.79
HMHB1-202ENST00000638299 ZDHHC16Q969W1 377 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 PCDHGA4Q9Y5G9 962 aa3.84□□□□□ -1.79
HMHB1-202ENST00000638299 SMAPO00193 183 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 ATMINO43313 823 aaPredicted RBP3.83□□□□□ -1.8
HMHB1-202ENST00000638299 ABL1P00519 1130 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 DNAJB2P25686 324 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 GCGRP47871 477 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 EIF4G2P78344 907 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMHB1-202ENST00000638299 MTMR2Q13614 643 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 DPH6Q7L8W6 267 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 SLF2Q8IX21 1173 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 HELBQ8NG08 1087 aaPredicted RBP3.83□□□□□ -1.8
HMHB1-202ENST00000638299 TMEM134Q9H6X4 195 aa3.83□□□□□ -1.8
HMHB1-202ENST00000638299 MKRN1Q9UHC7 482 aaKnown RBP3.83□□□□□ -1.8
HMHB1-202ENST00000638299 ANKRD62A6NC57 917 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 FAM196BA6NMK8 535 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms