RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 BRMS1Q9HCU9 246 aa19.54■□□□□ 0.72
CLN5-208ENST00000636183 CNNM1Q9NRU3 951 aa19.54■□□□□ 0.72
CLN5-208ENST00000636183 GOLGA6L3A6NEY3 463 aa19.54■□□□□ 0.72
CLN5-208ENST00000636183 BICD2Q8TD16 824 aa19.53■□□□□ 0.72
CLN5-208ENST00000636183 CABP2Q9NPB3 220 aa19.52■□□□□ 0.72
CLN5-208ENST00000636183 TBC1D2BQ9UPU7 963 aa19.52■□□□□ 0.72
CLN5-208ENST00000636183 ATP6V1DQ9Y5K8 247 aa19.52■□□□□ 0.72
CLN5-208ENST00000636183 ZNF592Q92610 1267 aa19.52■□□□□ 0.71
CLN5-208ENST00000636183 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
CLN5-208ENST00000636183 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
CLN5-208ENST00000636183 DNAJC2Q99543 621 aaKnown RBP19.51■□□□□ 0.71
CLN5-208ENST00000636183 ZNF219Q9P2Y4 722 aaPredicted RBP19.51■□□□□ 0.71
CLN5-208ENST00000636183 WDHD1O75717 1129 aaPredicted RBP19.5■□□□□ 0.71
CLN5-208ENST00000636183 OFD1O75665 1012 aa19.49■□□□□ 0.71
CLN5-208ENST00000636183 CABP4P57796 275 aa19.49■□□□□ 0.71
CLN5-208ENST00000636183 COG6Q9Y2V7 657 aa19.49■□□□□ 0.71
CLN5-208ENST00000636183 VPS37CA5D8V6 355 aaPredicted RBP19.49■□□□□ 0.71
CLN5-208ENST00000636183 TATP17735 454 aaPredicted RBP19.49■□□□□ 0.71
CLN5-208ENST00000636183 GGNBP2Q9H3C7 697 aa19.49■□□□□ 0.71
CLN5-208ENST00000636183 SLC3A2P08195 630 aaKnown RBP19.48■□□□□ 0.71
CLN5-208ENST00000636183 ATP2B1P20020 1258 aa19.48■□□□□ 0.71
CLN5-208ENST00000636183 CDK5RAP3Q96JB5 506 aa19.48■□□□□ 0.71
CLN5-208ENST00000636183 KRT18P05783 430 aaKnown RBP19.48■□□□□ 0.71
CLN5-208ENST00000636183 WDR78Q5VTH9 848 aa19.48■□□□□ 0.71
CLN5-208ENST00000636183 TMEM132EQ6IEE7 984 aa19.47■□□□□ 0.71
CLN5-208ENST00000636183 XBP1P17861 261 aa19.47■□□□□ 0.71
CLN5-208ENST00000636183 KIF15Q9NS87 1388 aa19.47■□□□□ 0.71
CLN5-208ENST00000636183 ERC2O15083 957 aa19.47■□□□□ 0.71
CLN5-208ENST00000636183 MATR3P43243 847 aaKnown RBP eCLIP19.47■□□□□ 0.71
CLN5-208ENST00000636183 DHX57Q6P158 1386 aaKnown RBP19.47■□□□□ 0.71
CLN5-208ENST00000636183 APAF1O14727 1248 aa19.46■□□□□ 0.71
CLN5-208ENST00000636183 PLCD3Q8N3E9 789 aa19.46■□□□□ 0.71
CLN5-208ENST00000636183 TTC39AQ5SRH9 613 aa19.46■□□□□ 0.71
CLN5-208ENST00000636183 FAM161AQ3B820 660 aa19.45■□□□□ 0.7
CLN5-208ENST00000636183 ADAMTS2O95450 1211 aa19.45■□□□□ 0.7
CLN5-208ENST00000636183 XPCQ01831 940 aaPredicted RBP19.45■□□□□ 0.7
CLN5-208ENST00000636183 UBTFL1P0CB47 393 aaPredicted RBP19.45■□□□□ 0.7
CLN5-208ENST00000636183 PLEKHO1Q53GL0 409 aaPredicted RBP19.45■□□□□ 0.7
CLN5-208ENST00000636183 GNL3LQ9NVN8 582 aaKnown RBP19.45■□□□□ 0.7
CLN5-208ENST00000636183 API5Q9BZZ5 524 aaKnown RBP19.44■□□□□ 0.7
CLN5-208ENST00000636183 ZHX3Q9H4I2 956 aa19.44■□□□□ 0.7
CLN5-208ENST00000636183 E9PSI1 815 aa19.44■□□□□ 0.7
CLN5-208ENST00000636183 SART3Q15020 963 aaKnown RBP19.43■□□□□ 0.7
CLN5-208ENST00000636183 DDX49Q9Y6V7 483 aaKnown RBP19.43■□□□□ 0.7
CLN5-208ENST00000636183 MYBBP1AQ9BQG0 1328 aaKnown RBP19.43■□□□□ 0.7
CLN5-208ENST00000636183 HSP90AB4PQ58FF6 505 aa19.43■□□□□ 0.7
CLN5-208ENST00000636183 PHLDB1Q86UU1 1377 aa19.42■□□□□ 0.7
CLN5-208ENST00000636183 DEKP35659 375 aaKnown RBP19.42■□□□□ 0.7
CLN5-208ENST00000636183 SMG6Q86US8 1419 aaKnown RBP19.42■□□□□ 0.7
CLN5-208ENST00000636183 CCDC88BA6NC98 1476 aa19.42■□□□□ 0.7
CLN5-208ENST00000636183 REC8O95072 547 aa19.42■□□□□ 0.7
CLN5-208ENST00000636183 FSD1Q9BTV5 496 aa19.42■□□□□ 0.7
CLN5-208ENST00000636183 CA8P35219 290 aa19.41■□□□□ 0.7
CLN5-208ENST00000636183 SKIDA1Q1XH10 827 aa19.41■□□□□ 0.7
CLN5-208ENST00000636183 HOMER1Q86YM7 354 aa19.41■□□□□ 0.7
CLN5-208ENST00000636183 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
CLN5-208ENST00000636183 PDCL3Q9H2J4 239 aa19.4■□□□□ 0.7
CLN5-208ENST00000636183 SMC3Q9UQE7 1217 aa19.4■□□□□ 0.7
CLN5-208ENST00000636183 MYL6BP14649 208 aa19.4■□□□□ 0.7
CLN5-208ENST00000636183 PRDM11Q9NQV5 511 aa19.4■□□□□ 0.7
CLN5-208ENST00000636183 SCLT1Q96NL6 688 aa19.4■□□□□ 0.7
CLN5-208ENST00000636183 SETQ01105 290 aaPredicted RBP19.39■□□□□ 0.69
CLN5-208ENST00000636183 SYCP1Q15431 976 aa19.39■□□□□ 0.69
CLN5-208ENST00000636183 VPS8Q8N3P4 1428 aa19.39■□□□□ 0.69
CLN5-208ENST00000636183 NEBLO76041 1014 aa19.39■□□□□ 0.69
CLN5-208ENST00000636183 RAPGEF2Q9Y4G8 1499 aa19.38■□□□□ 0.69
CLN5-208ENST00000636183 BCL11BQ9C0K0 894 aaPredicted RBP19.38■□□□□ 0.69
CLN5-208ENST00000636183 PRDM2Q13029 1718 aa19.38■□□□□ 0.69
CLN5-208ENST00000636183 MPHOSPH8Q99549 860 aa19.38■□□□□ 0.69
CLN5-208ENST00000636183 THEMISQ8N1K5 641 aaPredicted RBP19.38■□□□□ 0.69
CLN5-208ENST00000636183 CADPSQ9ULU8 1353 aa19.38■□□□□ 0.69
CLN5-208ENST00000636183 GNAI1P63096 354 aa19.38■□□□□ 0.69
CLN5-208ENST00000636183 TTLL5Q6EMB2 1281 aa19.38■□□□□ 0.69
CLN5-208ENST00000636183 SPINK5Q9NQ38 1064 aaPredicted RBP19.38■□□□□ 0.69
CLN5-208ENST00000636183 DDX19BQ9UMR2 479 aa19.37■□□□□ 0.69
CLN5-208ENST00000636183 MIA2Q96PC5 1412 aa19.37■□□□□ 0.69
CLN5-208ENST00000636183 CCDC158Q5M9N0 1113 aa19.36■□□□□ 0.69
CLN5-208ENST00000636183 PDILTQ8N807 584 aa19.36■□□□□ 0.69
CLN5-208ENST00000636183 DZIP1LQ8IYY4 767 aaKnown RBP19.36■□□□□ 0.69
CLN5-208ENST00000636183 TMOD2Q9NZR1 351 aa19.35■□□□□ 0.69
CLN5-208ENST00000636183 SASS6Q6UVJ0 657 aa19.35■□□□□ 0.69
CLN5-208ENST00000636183 ANKLE2Q86XL3 938 aa19.35■□□□□ 0.69
CLN5-208ENST00000636183 C16orf71Q8IYS4 520 aaPredicted RBP19.35■□□□□ 0.69
CLN5-208ENST00000636183 CRBNQ96SW2 442 aa19.35■□□□□ 0.69
CLN5-208ENST00000636183 CCDC73Q6ZRK6 1079 aa19.34■□□□□ 0.69
CLN5-208ENST00000636183 SIL1Q9H173 461 aa19.34■□□□□ 0.69
CLN5-208ENST00000636183 DDX11L8A8MPP1 907 aa19.33■□□□□ 0.69
CLN5-208ENST00000636183 ECM2O94769 699 aaPredicted RBP19.33■□□□□ 0.69
CLN5-208ENST00000636183 RDXP35241 583 aaKnown RBP19.33■□□□□ 0.69
CLN5-208ENST00000636183 GPS2Q13227 327 aa19.33■□□□□ 0.69
CLN5-208ENST00000636183 SPG7Q9UQ90 795 aa19.33■□□□□ 0.69
CLN5-208ENST00000636183 CCDC30Q5VVM6 783 aa19.33■□□□□ 0.69
CLN5-208ENST00000636183 OLFM4Q6UX06 510 aa19.33■□□□□ 0.69
CLN5-208ENST00000636183 NGLY1Q96IV0 654 aa19.33■□□□□ 0.68
CLN5-208ENST00000636183 RUFY1Q96T51 708 aa19.32■□□□□ 0.68
CLN5-208ENST00000636183 RBM19Q9Y4C8 960 aaKnown RBP19.32■□□□□ 0.68
CLN5-208ENST00000636183 SURF6O75683 361 aaKnown RBP19.31■□□□□ 0.68
CLN5-208ENST00000636183 MTHFSP49914 203 aa19.31■□□□□ 0.68
CLN5-208ENST00000636183 RUNDC1Q96C34 613 aa19.31■□□□□ 0.68
CLN5-208ENST00000636183 CCDC173Q0VFZ6 552 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms