RNA–Protein interactions for RNA: ENST00000630951.1

RAB28-208, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB28, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-208ENST00000630951 PLEKHH1Q9ULM0 1364 aa31.08■■■□□ 2.57
RAB28-208ENST00000630951 ADGRB1O14514 1584 aa31.06■■■□□ 2.56
RAB28-208ENST00000630951 NHSL1Q5SYE7 1610 aa31.05■■■□□ 2.56
RAB28-208ENST00000630951 TRIM26Q12899 539 aaPredicted RBP31.03■■■□□ 2.56
RAB28-208ENST00000630951 ORAI2Q96SN7 254 aa31.03■■■□□ 2.56
RAB28-208ENST00000630951 SPATA31A6Q5VVP1 1343 aa31.03■■■□□ 2.56
RAB28-208ENST00000630951 DLC1Q96QB1 1528 aa31.02■■■□□ 2.56
RAB28-208ENST00000630951 LRRC59Q96AG4 307 aaKnown RBP31.01■■■□□ 2.55
RAB28-208ENST00000630951 PRAM1Q96QH2 718 aa31■■■□□ 2.55
RAB28-208ENST00000630951 DDX17Q92841 729 aaKnown RBP30.99■■■□□ 2.55
RAB28-208ENST00000630951 SHPRHQ149N8 1683 aa30.98■■■□□ 2.55
RAB28-208ENST00000630951 ESCO1Q5FWF5 840 aa30.97■■■□□ 2.55
RAB28-208ENST00000630951 POGKQ9P215 609 aa30.97■■■□□ 2.55
RAB28-208ENST00000630951 TRAK1Q9UPV9 953 aa30.97■■■□□ 2.55
RAB28-208ENST00000630951 RGS17Q9UGC6 210 aaPredicted RBP30.96■■■□□ 2.55
RAB28-208ENST00000630951 SOS2Q07890 1332 aaPredicted RBP30.95■■■□□ 2.54
RAB28-208ENST00000630951 SAFB2Q14151 953 aaKnown RBP eCLIP30.93■■■□□ 2.542e-6■■■□□ 16.4
RAB28-208ENST00000630951 NUTM2FA1L443 756 aa30.92■■■□□ 2.54
RAB28-208ENST00000630951 FMN2Q9NZ56 1722 aa30.9■■■□□ 2.54
RAB28-208ENST00000630951 SOCS7O14512 581 aa30.9■■■□□ 2.54
RAB28-208ENST00000630951 SIN3AQ96ST3 1273 aa30.9■■■□□ 2.54
RAB28-208ENST00000630951 NPHP3Q7Z494 1330 aa30.9■■■□□ 2.54
RAB28-208ENST00000630951 LRP6O75581 1613 aa30.88■■■□□ 2.53
RAB28-208ENST00000630951 L3MBTL2Q969R5 705 aa30.87■■■□□ 2.53
RAB28-208ENST00000630951 KIAA1210Q9ULL0 1709 aa30.87■■■□□ 2.53
RAB28-208ENST00000630951 PNPLA6Q8IY17 1366 aa30.87■■■□□ 2.53
RAB28-208ENST00000630951 FOXO3O43524 673 aa30.86■■■□□ 2.53
RAB28-208ENST00000630951 MEX3CQ5U5Q3 659 aaKnown RBP30.84■■■□□ 2.53
RAB28-208ENST00000630951 ADGRB2O60241 1585 aa30.84■■■□□ 2.53
RAB28-208ENST00000630951 NEUROD1Q13562 356 aa30.84■■■□□ 2.53
RAB28-208ENST00000630951 NUTM2BA6NNL0 878 aaPredicted RBP30.83■■■□□ 2.53
RAB28-208ENST00000630951 NUTM2EB1AL46 878 aaPredicted RBP30.83■■■□□ 2.53
RAB28-208ENST00000630951 NUTM2AQ8IVF1 878 aaPredicted RBP30.83■■■□□ 2.53
RAB28-208ENST00000630951 PXDNQ92626 1479 aa30.81■■■□□ 2.52
RAB28-208ENST00000630951 NBPF1Q3BBV0 1214 aa30.81■■■□□ 2.52
RAB28-208ENST00000630951 MINK1Q8N4C8 1332 aaPredicted RBP30.8■■■□□ 2.52
RAB28-208ENST00000630951 HIRIP3Q9BW71 556 aaPredicted RBP30.8■■■□□ 2.52
RAB28-208ENST00000630951 ANKARQ7Z5J8 1434 aa30.79■■■□□ 2.52
RAB28-208ENST00000630951 KIF1AQ12756 1690 aa30.79■■■□□ 2.52
RAB28-208ENST00000630951 POTEAQ6S8J7 498 aa30.78■■■□□ 2.52
RAB28-208ENST00000630951 PHF8Q9UPP1 1060 aa30.78■■■□□ 2.52
RAB28-208ENST00000630951 ARHGEF28Q8N1W1 1705 aaKnown RBP30.78■■■□□ 2.52
RAB28-208ENST00000630951 EIF3AQ14152 1382 aaKnown RBP30.77■■■□□ 2.52
RAB28-208ENST00000630951 WASLO00401 505 aaPredicted RBP30.76■■■□□ 2.51
RAB28-208ENST00000630951 XPCQ01831 940 aaPredicted RBP30.75■■■□□ 2.51
RAB28-208ENST00000630951 RGPD8O14715 1765 aaPredicted RBP30.75■■■□□ 2.51
RAB28-208ENST00000630951 ZNF772Q68DY9 489 aaPredicted RBP30.74■■■□□ 2.51
RAB28-208ENST00000630951 KRT28Q7Z3Y7 464 aa30.71■■■□□ 2.51
RAB28-208ENST00000630951 USP32Q8NFA0 1604 aa30.71■■■□□ 2.51
RAB28-208ENST00000630951 TULP4Q9NRJ4 1543 aa30.7■■■□□ 2.51
RAB28-208ENST00000630951 COL22A1Q8NFW1 1626 aaPredicted RBP30.7■■■□□ 2.5
RAB28-208ENST00000630951 PSME1Q06323 249 aa30.68■■■□□ 2.5
RAB28-208ENST00000630951 SPATA31A3Q5VYP0 1347 aa30.68■■■□□ 2.5
RAB28-208ENST00000630951 PRR36Q9H6K5 1346 aa30.68■■■□□ 2.5
RAB28-208ENST00000630951 PMFBP1Q8TBY8 1022 aa30.66■■■□□ 2.5
RAB28-208ENST00000630951 ADAMTS2O95450 1211 aa30.65■■■□□ 2.5
RAB28-208ENST00000630951 C8orf37Q96NL8 207 aa30.65■■■□□ 2.5
RAB28-208ENST00000630951 AFF2P51816 1311 aa30.65■■■□□ 2.5
RAB28-208ENST00000630951 TRPM1Q7Z4N2 1603 aa30.63■■■□□ 2.49
RAB28-208ENST00000630951 SBNO1A3KN83 1393 aa30.63■■■□□ 2.49
RAB28-208ENST00000630951 CENPJQ9HC77 1338 aaPredicted RBP30.62■■■□□ 2.49
RAB28-208ENST00000630951 CDK19Q9BWU1 502 aa30.62■■■□□ 2.49
RAB28-208ENST00000630951 NUDT16Q96DE0 195 aaKnown RBP30.61■■■□□ 2.49
RAB28-208ENST00000630951 NGLY1Q96IV0 654 aa30.61■■■□□ 2.49
RAB28-208ENST00000630951 TNS3Q68CZ2 1445 aa30.6■■■□□ 2.49
RAB28-208ENST00000630951 ROCK2O75116 1388 aaKnown RBP30.6■■■□□ 2.49
RAB28-208ENST00000630951 TONSLQ96HA7 1378 aa30.6■■■□□ 2.49
RAB28-208ENST00000630951 ATP7BP35670 1465 aa30.59■■■□□ 2.49
RAB28-208ENST00000630951 NBPF8Q3BBV2 869 aa30.58■■■□□ 2.49
RAB28-208ENST00000630951 GPRASP1Q5JY77 1395 aa30.58■■■□□ 2.49
RAB28-208ENST00000630951 NGDNQ8NEJ9 315 aaKnown RBP30.55■■■□□ 2.48
RAB28-208ENST00000630951 ARHGEF10O15013 1369 aa30.55■■■□□ 2.48
RAB28-208ENST00000630951 FNBP4Q8N3X1 1017 aaPredicted RBP30.55■■■□□ 2.48
RAB28-208ENST00000630951 CCDC61Q9Y6R9 512 aa30.55■■■□□ 2.48
RAB28-208ENST00000630951 ITSN1Q15811 1721 aa30.53■■■□□ 2.48
RAB28-208ENST00000630951 RXRBP28702 533 aa30.53■■■□□ 2.48
RAB28-208ENST00000630951 LMOD2Q6P5Q4 547 aa30.51■■■□□ 2.47
RAB28-208ENST00000630951 QTRT2Q9H974 415 aaKnown RBP30.51■■■□□ 2.47
RAB28-208ENST00000630951 USP21Q9UK80 565 aa30.49■■■□□ 2.47
RAB28-208ENST00000630951 QRICH2Q9H0J4 1663 aa30.49■■■□□ 2.47
RAB28-208ENST00000630951 SRPK2P78362 688 aaKnown RBP30.49■■■□□ 2.47
RAB28-208ENST00000630951 TRPM3Q9HCF6 1732 aaPredicted RBP30.48■■■□□ 2.47
RAB28-208ENST00000630951 PLEKHG3A1L390 1219 aa30.48■■■□□ 2.47
RAB28-208ENST00000630951 MARF1Q9Y4F3 1742 aaKnown RBP30.47■■■□□ 2.47
RAB28-208ENST00000630951 POLR3AO14802 1390 aaPredicted RBP30.46■■■□□ 2.47
RAB28-208ENST00000630951 HAP1P54257 671 aaPredicted RBP30.46■■■□□ 2.47
RAB28-208ENST00000630951 RBM6P78332 1123 aaKnown RBP30.46■■■□□ 2.47
RAB28-208ENST00000630951 TOPAZ1Q8N9V7 1692 aa30.45■■■□□ 2.47
RAB28-208ENST00000630951 CABLES1Q8TDN4 633 aa30.45■■■□□ 2.46
RAB28-208ENST00000630951 CDK12Q9NYV4 1490 aaPredicted RBP30.44■■■□□ 2.46
RAB28-208ENST00000630951 ACEP12821 1306 aa30.44■■■□□ 2.46
RAB28-208ENST00000630951 CARD11Q9BXL7 1154 aa30.44■■■□□ 2.46
RAB28-208ENST00000630951 CABP2Q9NPB3 220 aa30.44■■■□□ 2.46
RAB28-208ENST00000630951 TRPC5Q9UL62 973 aaPredicted RBP30.44■■■□□ 2.46
RAB28-208ENST00000630951 EVC2Q86UK5 1308 aa30.43■■■□□ 2.46
RAB28-208ENST00000630951 PCGF6Q9BYE7 350 aa30.43■■■□□ 2.46
RAB28-208ENST00000630951 RALGAPBQ86X10 1494 aa30.43■■■□□ 2.46
RAB28-208ENST00000630951 ALS2Q96Q42 1657 aa30.43■■■□□ 2.46
RAB28-208ENST00000630951 PAK3O75914 559 aaPredicted RBP30.42■■■□□ 2.46
RAB28-208ENST00000630951 BCL9LQ86UU0 1499 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 282.2 ms