RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 ZBTB3Q9H5J0 574 aa8.11□□□□□ -1.11
CDR1-202ENST00000625883 C1orf115Q9H7X2 142 aa8.11□□□□□ -1.11
CDR1-202ENST00000625883 MTMR14Q8NCE2 650 aa8.1□□□□□ -1.11
CDR1-202ENST00000625883 NUTM2BA6NNL0 878 aaPredicted RBP8.09□□□□□ -1.11
CDR1-202ENST00000625883 NUTM2EB1AL46 878 aaPredicted RBP8.09□□□□□ -1.11
CDR1-202ENST00000625883 NUTM2DQ5VT03 806 aaPredicted RBP8.09□□□□□ -1.11
CDR1-202ENST00000625883 NUTM2AQ8IVF1 878 aaPredicted RBP8.09□□□□□ -1.11
CDR1-202ENST00000625883 AP1G2O75843 785 aa8.08□□□□□ -1.12
CDR1-202ENST00000625883 ATP6V1AP38606 617 aa8.08□□□□□ -1.12
CDR1-202ENST00000625883 TSR3Q9UJK0 312 aaKnown RBP8.08□□□□□ -1.12
CDR1-202ENST00000625883 COG6Q9Y2V7 657 aa8.08□□□□□ -1.12
CDR1-202ENST00000625883 TRAK2O60296 914 aa8.07□□□□□ -1.12
CDR1-202ENST00000625883 PPP4CP60510 307 aa8.07□□□□□ -1.12
CDR1-202ENST00000625883 KMT5BQ4FZB7 885 aa8.07□□□□□ -1.12
CDR1-202ENST00000625883 GRIPAP1Q4V328 841 aa8.07□□□□□ -1.12
CDR1-202ENST00000625883 ARID3CA6NKF2 412 aa8.06□□□□□ -1.12
CDR1-202ENST00000625883 ACTN4O43707 911 aaKnown RBP8.06□□□□□ -1.12
CDR1-202ENST00000625883 USP17L8P0C7I0 530 aa8.06□□□□□ -1.12
CDR1-202ENST00000625883 PTPN5P54829 565 aa8.06□□□□□ -1.12
CDR1-202ENST00000625883 MTMR2Q13614 643 aa8.06□□□□□ -1.12
CDR1-202ENST00000625883 PROSER2Q86WR7 435 aaPredicted RBP8.06□□□□□ -1.12
CDR1-202ENST00000625883 FNBP4Q8N3X1 1017 aaPredicted RBP8.06□□□□□ -1.12
CDR1-202ENST00000625883 PRR14Q9BWN1 585 aa8.06□□□□□ -1.12
CDR1-202ENST00000625883 SOCS7O14512 581 aa8.06□□□□□ -1.12
CDR1-202ENST00000625883 BCAMP50895 628 aa8.06□□□□□ -1.12
CDR1-202ENST00000625883 PUS10Q3MIT2 529 aaKnown RBP8.06□□□□□ -1.12
CDR1-202ENST00000625883 MORN1Q5T089 497 aa8.06□□□□□ -1.12
CDR1-202ENST00000625883 HPS5Q9UPZ3 1129 aa8.06□□□□□ -1.12
CDR1-202ENST00000625883 CFAP99D6REC4 459 aa8.05□□□□□ -1.12
CDR1-202ENST00000625883 SYMPKQ92797 1274 aaKnown RBP8.05□□□□□ -1.12
CDR1-202ENST00000625883 ARXQ96QS3 562 aa8.05□□□□□ -1.12
CDR1-202ENST00000625883 C6orf229H3BNL8 230 aa8.04□□□□□ -1.12
CDR1-202ENST00000625883 RAD21O60216 631 aa8.04□□□□□ -1.12
CDR1-202ENST00000625883 APLP1P51693 650 aa8.04□□□□□ -1.12
CDR1-202ENST00000625883 APBB1O00213 710 aa8.03□□□□□ -1.12
CDR1-202ENST00000625883 CTDSPL2Q05D32 466 aa8.03□□□□□ -1.12
CDR1-202ENST00000625883 SLC27A5Q9Y2P5 690 aa8.03□□□□□ -1.12
CDR1-202ENST00000625883 GJD4Q96KN9 370 aaPredicted RBP8.02□□□□□ -1.13
CDR1-202ENST00000625883 GDPD2Q9HCC8 539 aa8.02□□□□□ -1.13
CDR1-202ENST00000625883 HMX1Q9NP08 348 aaPredicted RBP8.02□□□□□ -1.13
CDR1-202ENST00000625883 TBC1D2BQ9UPU7 963 aa8.01□□□□□ -1.13
CDR1-202ENST00000625883 HELBQ8NG08 1087 aaPredicted RBP8□□□□□ -1.13
CDR1-202ENST00000625883 WBP1LQ9NX94 342 aa8□□□□□ -1.13
CDR1-202ENST00000625883 BLOC1S3Q6QNY0 202 aa8□□□□□ -1.13
CDR1-202ENST00000625883 RNF19BQ6ZMZ0 732 aa8□□□□□ -1.13
CDR1-202ENST00000625883 RETREG3Q86VR2 466 aa8□□□□□ -1.13
CDR1-202ENST00000625883 PRR7Q8TB68 274 aa8□□□□□ -1.13
CDR1-202ENST00000625883 LRRN4Q8WUT4 740 aa8□□□□□ -1.13
CDR1-202ENST00000625883 TSC1Q92574 1164 aa8□□□□□ -1.13
CDR1-202ENST00000625883 TRIM34Q9BYJ4 488 aa8□□□□□ -1.13
CDR1-202ENST00000625883 GPR37L1O60883 481 aa7.99□□□□□ -1.13
CDR1-202ENST00000625883 ZNF777Q9ULD5 760 aaPredicted RBP7.99□□□□□ -1.13
CDR1-202ENST00000625883 Q3C1V9 767 aa7.98□□□□□ -1.13
CDR1-202ENST00000625883 PER1O15534 1290 aaPredicted RBP7.97□□□□□ -1.13
CDR1-202ENST00000625883 ABL2P42684 1182 aa7.97□□□□□ -1.13
CDR1-202ENST00000625883 BRICD5Q6PL45 260 aa7.97□□□□□ -1.13
CDR1-202ENST00000625883 HOMEZQ8IX15 550 aa7.97□□□□□ -1.13
CDR1-202ENST00000625883 THAP11Q96EK4 314 aa7.97□□□□□ -1.13
CDR1-202ENST00000625883 ARID3AQ99856 593 aa7.97□□□□□ -1.13
CDR1-202ENST00000625883 PCDHB3Q9Y5E6 796 aa7.97□□□□□ -1.13
CDR1-202ENST00000625883 NDUFB9Q9Y6M9 179 aa7.97□□□□□ -1.13
CDR1-202ENST00000625883 SCUBE3Q8IX30 993 aa7.96□□□□□ -1.13
CDR1-202ENST00000625883 CCDC82Q8N4S0 544 aa7.96□□□□□ -1.13
CDR1-202ENST00000625883 EPS8L1Q8TE68 723 aa7.96□□□□□ -1.13
CDR1-202ENST00000625883 SALL2Q9Y467 1007 aaPredicted RBP7.96□□□□□ -1.13
CDR1-202ENST00000625883 IRF5Q13568 498 aa7.95□□□□□ -1.14
CDR1-202ENST00000625883 DESI1Q6ICB0 168 aa7.95□□□□□ -1.14
CDR1-202ENST00000625883 PRM3Q9NNZ6 103 aa7.95□□□□□ -1.14
CDR1-202ENST00000625883 ZNF330Q9Y3S2 320 aaPredicted RBP7.95□□□□□ -1.14
CDR1-202ENST00000625883 USB1Q9BQ65 265 aaKnown RBP7.94□□□□□ -1.14
CDR1-202ENST00000625883 NR1I2O75469 434 aa7.94□□□□□ -1.14
CDR1-202ENST00000625883 POM121CA8CG34 1229 aa7.93□□□□□ -1.14
CDR1-202ENST00000625883 NR6A1Q15406 480 aa7.93□□□□□ -1.14
CDR1-202ENST00000625883 LYPD8Q6UX82 237 aa7.93□□□□□ -1.14
CDR1-202ENST00000625883 FMNL1O95466 1100 aaPredicted RBP7.92□□□□□ -1.14
CDR1-202ENST00000625883 PLA2G2EQ9NZK7 142 aa7.92□□□□□ -1.14
CDR1-202ENST00000625883 KCNC4Q03721 635 aa7.91□□□□□ -1.14
CDR1-202ENST00000625883 WWC1Q8IX03 1113 aa7.91□□□□□ -1.14
CDR1-202ENST00000625883 IL21Q9HBE4 155 aa7.91□□□□□ -1.14
CDR1-202ENST00000625883 ITGBL1O95965 494 aaPredicted RBP7.9□□□□□ -1.14
CDR1-202ENST00000625883 COPS2P61201 443 aa7.9□□□□□ -1.14
CDR1-202ENST00000625883 IFFO2Q5TF58 517 aa7.9□□□□□ -1.14
CDR1-202ENST00000625883 JUNDP17535 347 aa7.89□□□□□ -1.15
CDR1-202ENST00000625883 FAM160A2Q8N612 972 aaPredicted RBP7.89□□□□□ -1.15
CDR1-202ENST00000625883 F12P00748 615 aaPredicted RBP7.88□□□□□ -1.15
CDR1-202ENST00000625883 MSS51Q4VC12 460 aa7.88□□□□□ -1.15
CDR1-202ENST00000625883 TLL1O43897 1013 aa7.87□□□□□ -1.15
CDR1-202ENST00000625883 ADAMTS19Q8TE59 1207 aa7.87□□□□□ -1.15
CDR1-202ENST00000625883 GLMNQ92990 594 aa7.87□□□□□ -1.15
CDR1-202ENST00000625883 SPSB2Q99619 263 aa7.87□□□□□ -1.15
CDR1-202ENST00000625883 MTRQ99707 1265 aa7.87□□□□□ -1.15
CDR1-202ENST00000625883 SERPINA10Q9UK55 444 aa7.87□□□□□ -1.15
CDR1-202ENST00000625883 DXOO77932 396 aaKnown RBP7.87□□□□□ -1.15
CDR1-202ENST00000625883 VAC14Q08AM6 782 aa7.87□□□□□ -1.15
CDR1-202ENST00000625883 PTPRNQ16849 979 aa7.87□□□□□ -1.15
CDR1-202ENST00000625883 WASHC4Q2M389 1173 aa7.87□□□□□ -1.15
CDR1-202ENST00000625883 CCDC97Q96F63 343 aaPredicted RBP7.87□□□□□ -1.15
CDR1-202ENST00000625883 PRDM9Q9NQV7 894 aa7.87□□□□□ -1.15
CDR1-202ENST00000625883 MAP10Q9P2G4 905 aa7.87□□□□□ -1.15
CDR1-202ENST00000625883 ZPR1O75312 459 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms