RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 NGEFQ8N5V2 710 aa18.95■□□□□ 0.62
PMS1-221ENST00000624204 UQCRHLA0A096LP55 91 aa18.94■□□□□ 0.62
PMS1-221ENST00000624204 UQCRHP07919 91 aa18.94■□□□□ 0.62
PMS1-221ENST00000624204 DZIP1LQ8IYY4 767 aaKnown RBP18.94■□□□□ 0.62
PMS1-221ENST00000624204 ZMYM3Q14202 1370 aa18.94■□□□□ 0.62
PMS1-221ENST00000624204 SMC5Q8IY18 1101 aa18.94■□□□□ 0.62
PMS1-221ENST00000624204 PPP1R9BQ96SB3 815 aa18.94■□□□□ 0.62
PMS1-221ENST00000624204 ZKSCAN2Q63HK3 967 aa18.93■□□□□ 0.62
PMS1-221ENST00000624204 LNPKQ9C0E8 428 aa18.93■□□□□ 0.62
PMS1-221ENST00000624204 CIZ1Q9ULV3 898 aaPredicted RBP18.93■□□□□ 0.62
PMS1-221ENST00000624204 PLA2R1Q13018 1463 aa18.93■□□□□ 0.62
PMS1-221ENST00000624204 KIAA0556O60303 1618 aa18.93■□□□□ 0.62
PMS1-221ENST00000624204 FOXD4L6Q3SYB3 417 aaPredicted RBP18.93■□□□□ 0.62
PMS1-221ENST00000624204 FOXD4L3Q6VB84 417 aaPredicted RBP18.93■□□□□ 0.62
PMS1-221ENST00000624204 ABCC2Q92887 1545 aa18.93■□□□□ 0.62
PMS1-221ENST00000624204 DDIT3P35638 169 aa18.92■□□□□ 0.62
PMS1-221ENST00000624204 RBM42Q9BTD8 480 aaKnown RBP18.92■□□□□ 0.62
PMS1-221ENST00000624204 PTMSP20962 102 aa18.91■□□□□ 0.62
PMS1-221ENST00000624204 CD2BP2O95400 341 aaKnown RBP18.91■□□□□ 0.62
PMS1-221ENST00000624204 MAP7D2Q96T17 732 aa18.91■□□□□ 0.62
PMS1-221ENST00000624204 SMC4Q9NTJ3 1288 aa18.91■□□□□ 0.62
PMS1-221ENST00000624204 CAVIN1Q6NZI2 390 aaKnown RBP18.9■□□□□ 0.62
PMS1-221ENST00000624204 SNX21Q969T3 373 aa18.9■□□□□ 0.62
PMS1-221ENST00000624204 TSR2Q969E8 191 aaKnown RBP18.9■□□□□ 0.62
PMS1-221ENST00000624204 RUNDC1Q96C34 613 aa18.9■□□□□ 0.62
PMS1-221ENST00000624204 SHANK2Q9UPX8 1470 aa18.89■□□□□ 0.61
PMS1-221ENST00000624204 DNTTIP2Q5QJE6 756 aaKnown RBP18.89■□□□□ 0.61
PMS1-221ENST00000624204 RBM25P49756 843 aaKnown RBP18.88■□□□□ 0.61
PMS1-221ENST00000624204 MCTP1Q6DN14 999 aa18.88■□□□□ 0.61
PMS1-221ENST00000624204 RNF214Q8ND24 703 aa18.88■□□□□ 0.61
PMS1-221ENST00000624204 CHAMP1Q96JM3 812 aa18.88■□□□□ 0.61
PMS1-221ENST00000624204 ADCY10Q96PN6 1610 aa18.87■□□□□ 0.61
PMS1-221ENST00000624204 ADAMTS12P58397 1594 aa18.87■□□□□ 0.61
PMS1-221ENST00000624204 MORC1Q86VD1 984 aa18.87■□□□□ 0.61
PMS1-221ENST00000624204 CARD14Q9BXL6 1004 aa18.87■□□□□ 0.61
PMS1-221ENST00000624204 BCL11BQ9C0K0 894 aaPredicted RBP18.87■□□□□ 0.61
PMS1-221ENST00000624204 K7ELQ4 463 aaPredicted RBP18.87■□□□□ 0.61
PMS1-221ENST00000624204 NCOA3Q9Y6Q9 1424 aa18.87■□□□□ 0.61
PMS1-221ENST00000624204 KLHL40Q2TBA0 621 aa18.86■□□□□ 0.61
PMS1-221ENST00000624204 CCDC141Q6ZP82 1450 aa18.86■□□□□ 0.61
PMS1-221ENST00000624204 FAM177BA6PVY3 158 aa18.86■□□□□ 0.61
PMS1-221ENST00000624204 APBB1O00213 710 aa18.86■□□□□ 0.61
PMS1-221ENST00000624204 BAG4O95429 457 aaKnown RBP18.86■□□□□ 0.61
PMS1-221ENST00000624204 GAS2L2Q8NHY3 880 aa18.86■□□□□ 0.61
PMS1-221ENST00000624204 JARID2Q92833 1246 aaPredicted RBP18.86■□□□□ 0.61
PMS1-221ENST00000624204 ABCC10Q5T3U5 1492 aa18.85■□□□□ 0.61
PMS1-221ENST00000624204 TSC1Q92574 1164 aa18.85■□□□□ 0.61
PMS1-221ENST00000624204 EIF2AK4Q9P2K8 1649 aaKnown RBP18.84■□□□□ 0.61
PMS1-221ENST00000624204 CHGAP10645 457 aaKnown RBP18.84■□□□□ 0.61
PMS1-221ENST00000624204 TRIM27P14373 513 aa18.84■□□□□ 0.61
PMS1-221ENST00000624204 CDC42BPAQ5VT25 1732 aa18.84■□□□□ 0.61
PMS1-221ENST00000624204 NUP160Q12769 1436 aa18.84■□□□□ 0.61
PMS1-221ENST00000624204 C1orf115Q9H7X2 142 aa18.84■□□□□ 0.61
PMS1-221ENST00000624204 TERF1P54274 439 aa18.83■□□□□ 0.61
PMS1-221ENST00000624204 WDR63Q8IWG1 891 aa18.83■□□□□ 0.61
PMS1-221ENST00000624204 DDX19BQ9UMR2 479 aa18.83■□□□□ 0.61
PMS1-221ENST00000624204 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
PMS1-221ENST00000624204 PTMAP06454 111 aaKnown RBP18.83■□□□□ 0.6
PMS1-221ENST00000624204 RBSNQ9H1K0 784 aa18.83■□□□□ 0.6
PMS1-221ENST00000624204 NOL7Q9UMY1 257 aaKnown RBP18.83■□□□□ 0.6
PMS1-221ENST00000624204 TARBP1Q13395 1621 aaKnown RBP18.82■□□□□ 0.6
PMS1-221ENST00000624204 NPC1L1Q9UHC9 1359 aa18.82■□□□□ 0.6
PMS1-221ENST00000624204 HDAC1Q13547 482 aaPredicted RBP18.82■□□□□ 0.6
PMS1-221ENST00000624204 LAMC1P11047 1609 aa18.82■□□□□ 0.6
PMS1-221ENST00000624204 U2SURPO15042 1029 aaKnown RBP18.82■□□□□ 0.6
PMS1-221ENST00000624204 ZSCAN23Q3MJ62 389 aa18.81■□□□□ 0.6
PMS1-221ENST00000624204 DNAJC5BQ9UF47 199 aa18.81■□□□□ 0.6
PMS1-221ENST00000624204 PLCB2Q00722 1185 aa18.81■□□□□ 0.6
PMS1-221ENST00000624204 NOL8Q76FK4 1167 aaKnown RBP18.81■□□□□ 0.6
PMS1-221ENST00000624204 PLXNC1O60486 1568 aa18.8■□□□□ 0.6
PMS1-221ENST00000624204 U2AF1L5P0DN76 240 aaPredicted RBP18.8■□□□□ 0.6
PMS1-221ENST00000624204 U2AF1Q01081 240 aaKnown RBP eCLIP18.8■□□□□ 0.6
PMS1-221ENST00000624204 EXOSC9Q06265 439 aaKnown RBP18.8■□□□□ 0.6
PMS1-221ENST00000624204 PRIM1P49642 420 aaKnown RBP18.8■□□□□ 0.6
PMS1-221ENST00000624204 KIF2CQ99661 725 aa18.8■□□□□ 0.6
PMS1-221ENST00000624204 RBM27Q9P2N5 1060 aaKnown RBP18.8■□□□□ 0.6
PMS1-221ENST00000624204 SYNMO15061 1565 aa18.8■□□□□ 0.6
PMS1-221ENST00000624204 ANKRD45Q5TZF3 282 aa18.79■□□□□ 0.6
PMS1-221ENST00000624204 TMEM57Q8N5G2 664 aa18.79■□□□□ 0.6
PMS1-221ENST00000624204 SMAP1Q8IYB5 467 aaPredicted RBP18.79■□□□□ 0.6
PMS1-221ENST00000624204 ZNF500O60304 480 aaPredicted RBP18.78■□□□□ 0.6
PMS1-221ENST00000624204 SSH1Q8WYL5 1049 aa18.78■□□□□ 0.6
PMS1-221ENST00000624204 NOB1Q9ULX3 412 aaKnown RBP18.78■□□□□ 0.6
PMS1-221ENST00000624204 MAGI1Q96QZ7 1491 aaPredicted RBP18.78■□□□□ 0.6
PMS1-221ENST00000624204 ELL2O00472 640 aaPredicted RBP18.78■□□□□ 0.6
PMS1-221ENST00000624204 SCAF11Q99590 1463 aaKnown RBP18.78■□□□□ 0.6
PMS1-221ENST00000624204 DYNC1I1O14576 645 aa18.78■□□□□ 0.6
PMS1-221ENST00000624204 IGSF3O75054 1194 aa18.78■□□□□ 0.6
PMS1-221ENST00000624204 MTHFSP49914 203 aa18.78■□□□□ 0.6
PMS1-221ENST00000624204 ATF7IPQ6VMQ6 1270 aa18.78■□□□□ 0.6
PMS1-221ENST00000624204 CHD1LQ86WJ1 897 aa18.78■□□□□ 0.6
PMS1-221ENST00000624204 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.78■□□□□ 0.6
PMS1-221ENST00000624204 ZKSCAN5Q9Y2L8 839 aa18.78■□□□□ 0.6
PMS1-221ENST00000624204 POLR3AO14802 1390 aaPredicted RBP18.77■□□□□ 0.6
PMS1-221ENST00000624204 PRPF40AO75400 957 aaKnown RBP18.77■□□□□ 0.6
PMS1-221ENST00000624204 SAFB2Q14151 953 aaKnown RBP eCLIP18.77■□□□□ 0.6
PMS1-221ENST00000624204 CSPP1Q1MSJ5 1256 aa18.77■□□□□ 0.6
PMS1-221ENST00000624204 MTERF4Q7Z6M4 381 aaKnown RBP18.77■□□□□ 0.6
PMS1-221ENST00000624204 ZNF445P59923 1031 aa18.76■□□□□ 0.59
PMS1-221ENST00000624204 HS1BP3Q53T59 392 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms