RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 PPP2R2DQ66LE6 453 aa8.22□□□□□ -1.09
SEM1-220ENST00000619259 WBP1LQ9NX94 342 aa8.22□□□□□ -1.09
SEM1-220ENST00000619259 UBTFP17480 764 aaKnown RBP8.21□□□□□ -1.1
SEM1-220ENST00000619259 APLP1P51693 650 aa8.21□□□□□ -1.1
SEM1-220ENST00000619259 PTPN5P54829 565 aa8.21□□□□□ -1.1
SEM1-220ENST00000619259 THSD4Q6ZMP0 1018 aa8.21□□□□□ -1.1
SEM1-220ENST00000619259 PCDHB3Q9Y5E6 796 aa8.21□□□□□ -1.1
SEM1-220ENST00000619259 MORN1Q5T089 497 aa8.2□□□□□ -1.1
SEM1-220ENST00000619259 SYMPKQ92797 1274 aaKnown RBP8.2□□□□□ -1.1
SEM1-220ENST00000619259 ZMYND15Q9H091 742 aa8.2□□□□□ -1.1
SEM1-220ENST00000619259 SLC27A5Q9Y2P5 690 aa8.2□□□□□ -1.1
SEM1-220ENST00000619259 MCM6Q14566 821 aa8.18□□□□□ -1.1
SEM1-220ENST00000619259 Q3C1V9 767 aa8.18□□□□□ -1.1
SEM1-220ENST00000619259 BANK1Q8NDB2 785 aa8.18□□□□□ -1.1
SEM1-220ENST00000619259 SNRKQ9NRH2 765 aa8.18□□□□□ -1.1
SEM1-220ENST00000619259 SPDYE5A6NIY4 337 aa8.17□□□□□ -1.1
SEM1-220ENST00000619259 SUPT5HO00267 1087 aaKnown RBP8.17□□□□□ -1.1
SEM1-220ENST00000619259 NR1I2O75469 434 aa8.17□□□□□ -1.1
SEM1-220ENST00000619259 HELBQ8NG08 1087 aaPredicted RBP8.17□□□□□ -1.1
SEM1-220ENST00000619259 RAD21O60216 631 aa8.16□□□□□ -1.1
SEM1-220ENST00000619259 COPS2P61201 443 aa8.16□□□□□ -1.1
SEM1-220ENST00000619259 BLOC1S3Q6QNY0 202 aa8.16□□□□□ -1.1
SEM1-220ENST00000619259 SCUBE3Q8IX30 993 aa8.16□□□□□ -1.1
SEM1-220ENST00000619259 CLUAP1Q96AJ1 413 aa8.16□□□□□ -1.1
SEM1-220ENST00000619259 PRR7Q8TB68 274 aa8.15□□□□□ -1.1
SEM1-220ENST00000619259 MYT1LQ9UL68 1186 aa8.15□□□□□ -1.1
SEM1-220ENST00000619259 CFAP99D6REC4 459 aa8.14□□□□□ -1.11
SEM1-220ENST00000619259 FMNL1O95466 1100 aaPredicted RBP8.14□□□□□ -1.11
SEM1-220ENST00000619259 USP17L8P0C7I0 530 aa8.14□□□□□ -1.11
SEM1-220ENST00000619259 CTDSPL2Q05D32 466 aa8.14□□□□□ -1.11
SEM1-220ENST00000619259 RNF19BQ6ZMZ0 732 aa8.14□□□□□ -1.11
SEM1-220ENST00000619259 RETREG3Q86VR2 466 aa8.14□□□□□ -1.11
SEM1-220ENST00000619259 PRM3Q9NNZ6 103 aa8.13□□□□□ -1.11
SEM1-220ENST00000619259 APBB1O00213 710 aa8.12□□□□□ -1.11
SEM1-220ENST00000619259 NYAP1Q6ZVC0 841 aa8.12□□□□□ -1.11
SEM1-220ENST00000619259 USB1Q9BQ65 265 aaKnown RBP8.12□□□□□ -1.11
SEM1-220ENST00000619259 BRICD5Q6PL45 260 aa8.11□□□□□ -1.11
SEM1-220ENST00000619259 POM121Q96HA1 1249 aa8.11□□□□□ -1.11
SEM1-220ENST00000619259 MTMR14Q8NCE2 650 aa8.1□□□□□ -1.11
SEM1-220ENST00000619259 LRRN4Q8WUT4 740 aa8.1□□□□□ -1.11
SEM1-220ENST00000619259 SPSB2Q99619 263 aa8.1□□□□□ -1.11
SEM1-220ENST00000619259 MTRQ99707 1265 aa8.09□□□□□ -1.11
SEM1-220ENST00000619259 SALL2Q9Y467 1007 aaPredicted RBP8.09□□□□□ -1.11
SEM1-220ENST00000619259 ABL2P42684 1182 aa8.08□□□□□ -1.12
SEM1-220ENST00000619259 GDPD2Q9HCC8 539 aa8.08□□□□□ -1.12
SEM1-220ENST00000619259 COG6Q9Y2V7 657 aa8.08□□□□□ -1.12
SEM1-220ENST00000619259 A6NJR5 290 aa8.07□□□□□ -1.12
SEM1-220ENST00000619259 PER1O15534 1290 aaPredicted RBP8.07□□□□□ -1.12
SEM1-220ENST00000619259 ZPR1O75312 459 aa8.07□□□□□ -1.12
SEM1-220ENST00000619259 PROSER2Q86WR7 435 aaPredicted RBP8.07□□□□□ -1.12
SEM1-220ENST00000619259 WWC1Q8IX03 1113 aa8.07□□□□□ -1.12
SEM1-220ENST00000619259 THAP11Q96EK4 314 aa8.07□□□□□ -1.12
SEM1-220ENST00000619259 TLL1O43897 1013 aa8.06□□□□□ -1.12
SEM1-220ENST00000619259 RNF166Q96A37 237 aaPredicted RBP8.06□□□□□ -1.12
SEM1-220ENST00000619259 IL21Q9HBE4 155 aa8.06□□□□□ -1.12
SEM1-220ENST00000619259 HMX1Q9NP08 348 aaPredicted RBP8.06□□□□□ -1.12
SEM1-220ENST00000619259 PCDH10Q9P2E7 1040 aa8.06□□□□□ -1.12
SEM1-220ENST00000619259 TBC1D2BQ9UPU7 963 aa8.06□□□□□ -1.12
SEM1-220ENST00000619259 DESI1Q6ICB0 168 aa8.05□□□□□ -1.12
SEM1-220ENST00000619259 ZNF516Q92618 1163 aa8.05□□□□□ -1.12
SEM1-220ENST00000619259 NDUFB9Q9Y6M9 179 aa8.05□□□□□ -1.12
SEM1-220ENST00000619259 ARID3CA6NKF2 412 aa8.04□□□□□ -1.12
SEM1-220ENST00000619259 TRAK2O60296 914 aa8.04□□□□□ -1.12
SEM1-220ENST00000619259 JUNDP17535 347 aa8.04□□□□□ -1.12
SEM1-220ENST00000619259 CTHP32929 405 aa8.04□□□□□ -1.12
SEM1-220ENST00000619259 NR6A1Q15406 480 aa8.04□□□□□ -1.12
SEM1-220ENST00000619259 LYPD8Q6UX82 237 aa8.04□□□□□ -1.12
SEM1-220ENST00000619259 SPNS2Q8IVW8 549 aa8.04□□□□□ -1.12
SEM1-220ENST00000619259 HCSTQ9UBK5 93 aa8.04□□□□□ -1.12
SEM1-220ENST00000619259 ADH1BP00325 375 aa8.03□□□□□ -1.12
SEM1-220ENST00000619259 TJAP1Q5JTD0 557 aa8.03□□□□□ -1.12
SEM1-220ENST00000619259 FAM160A2Q8N612 972 aaPredicted RBP8.03□□□□□ -1.12
SEM1-220ENST00000619259 EPS8L1Q8TE68 723 aa8.03□□□□□ -1.12
SEM1-220ENST00000619259 GJD4Q96KN9 370 aaPredicted RBP8.03□□□□□ -1.12
SEM1-220ENST00000619259 PRDM9Q9NQV7 894 aa8.03□□□□□ -1.12
SEM1-220ENST00000619259 ZNF777Q9ULD5 760 aaPredicted RBP8.03□□□□□ -1.12
SEM1-220ENST00000619259 ZNF330Q9Y3S2 320 aaPredicted RBP8.03□□□□□ -1.12
SEM1-220ENST00000619259 CCDC180Q9P1Z9 1646 aa8.03□□□□□ -1.12
SEM1-220ENST00000619259 SOCS7O14512 581 aa8.02□□□□□ -1.13
SEM1-220ENST00000619259 MSS51Q4VC12 460 aa8.02□□□□□ -1.13
SEM1-220ENST00000619259 CCDC24Q8N4L8 307 aa8.02□□□□□ -1.13
SEM1-220ENST00000619259 PNMA1Q8ND90 353 aa8.01□□□□□ -1.13
SEM1-220ENST00000619259 ARID3AQ99856 593 aa8.01□□□□□ -1.13
SEM1-220ENST00000619259 TRIM34Q9BYJ4 488 aa8.01□□□□□ -1.13
SEM1-220ENST00000619259 SLC6A16Q9GZN6 736 aa8.01□□□□□ -1.13
SEM1-220ENST00000619259 PTPRNQ16849 979 aa8□□□□□ -1.13
SEM1-220ENST00000619259 NKX2-3Q8TAU0 364 aa8□□□□□ -1.13
SEM1-220ENST00000619259 NUDT12Q9BQG2 462 aa8□□□□□ -1.13
SEM1-220ENST00000619259 CCNYL3P0C7X3 344 aa7.99□□□□□ -1.13
SEM1-220ENST00000619259 MAP10Q9P2G4 905 aa7.99□□□□□ -1.13
SEM1-220ENST00000619259 DXOO77932 396 aaKnown RBP7.98□□□□□ -1.13
SEM1-220ENST00000619259 KCNC4Q03721 635 aa7.98□□□□□ -1.13
SEM1-220ENST00000619259 FNBP4Q8N3X1 1017 aaPredicted RBP7.98□□□□□ -1.13
SEM1-220ENST00000619259 S1PR4O95977 384 aa7.97□□□□□ -1.13
SEM1-220ENST00000619259 MMP16P51512 607 aa7.97□□□□□ -1.13
SEM1-220ENST00000619259 KCNH2Q12809 1159 aa7.96□□□□□ -1.14
SEM1-220ENST00000619259 EVA1BQ9NVM1 165 aa7.96□□□□□ -1.14
SEM1-220ENST00000619259 F12P00748 615 aaPredicted RBP7.95□□□□□ -1.14
SEM1-220ENST00000619259 VAC14Q08AM6 782 aa7.95□□□□□ -1.14
SEM1-220ENST00000619259 WASHC4Q2M389 1173 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms