RNA–Protein interactions for RNA: ENST00000617133.4

SEM1-217, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-217ENST00000617133 MTMR2Q13614 643 aa9.63□□□□□ -0.87
SEM1-217ENST00000617133 NUTM2DQ5VT03 806 aaPredicted RBP9.63□□□□□ -0.87
SEM1-217ENST00000617133 NUTM2AQ8IVF1 878 aaPredicted RBP9.63□□□□□ -0.87
SEM1-217ENST00000617133 C6orf229H3BNL8 230 aa9.62□□□□□ -0.87
SEM1-217ENST00000617133 BLOC1S3Q6QNY0 202 aa9.62□□□□□ -0.87
SEM1-217ENST00000617133 ERICH6Q7L0X2 663 aa9.62□□□□□ -0.87
SEM1-217ENST00000617133 SYMPKQ92797 1274 aaKnown RBP9.62□□□□□ -0.87
SEM1-217ENST00000617133 NYAP1Q6ZVC0 841 aa9.61□□□□□ -0.87
SEM1-217ENST00000617133 FLIIQ13045 1269 aa9.6□□□□□ -0.87
SEM1-217ENST00000617133 Q3C1V9 767 aa9.6□□□□□ -0.87
SEM1-217ENST00000617133 TMEM259Q4ZIN3 620 aa9.6□□□□□ -0.87
SEM1-217ENST00000617133 SPNS2Q8IVW8 549 aa9.6□□□□□ -0.87
SEM1-217ENST00000617133 SPDYE5A6NIY4 337 aa9.59□□□□□ -0.87
SEM1-217ENST00000617133 NR1I2O75469 434 aa9.59□□□□□ -0.87
SEM1-217ENST00000617133 MCM6Q14566 821 aa9.59□□□□□ -0.87
SEM1-217ENST00000617133 SCUBE3Q8IX30 993 aa9.59□□□□□ -0.87
SEM1-217ENST00000617133 CFAP99D6REC4 459 aa9.58□□□□□ -0.88
SEM1-217ENST00000617133 COPS2P61201 443 aa9.58□□□□□ -0.88
SEM1-217ENST00000617133 RNF19BQ6ZMZ0 732 aa9.58□□□□□ -0.88
SEM1-217ENST00000617133 BANK1Q8NDB2 785 aa9.58□□□□□ -0.88
SEM1-217ENST00000617133 AP1G2O75843 785 aa9.57□□□□□ -0.88
SEM1-217ENST00000617133 BRICD5Q6PL45 260 aa9.57□□□□□ -0.88
SEM1-217ENST00000617133 RETREG3Q86VR2 466 aa9.57□□□□□ -0.88
SEM1-217ENST00000617133 RNF166Q96A37 237 aaPredicted RBP9.57□□□□□ -0.88
SEM1-217ENST00000617133 SALL2Q9Y467 1007 aaPredicted RBP9.57□□□□□ -0.88
SEM1-217ENST00000617133 THAP11Q96EK4 314 aa9.56□□□□□ -0.88
SEM1-217ENST00000617133 SNRKQ9NRH2 765 aa9.56□□□□□ -0.88
SEM1-217ENST00000617133 FMNL1O95466 1100 aaPredicted RBP9.55□□□□□ -0.88
SEM1-217ENST00000617133 PRR7Q8TB68 274 aa9.55□□□□□ -0.88
SEM1-217ENST00000617133 MTRQ99707 1265 aa9.55□□□□□ -0.88
SEM1-217ENST00000617133 USP17L8P0C7I0 530 aa9.54□□□□□ -0.88
SEM1-217ENST00000617133 HELBQ8NG08 1087 aaPredicted RBP9.54□□□□□ -0.88
SEM1-217ENST00000617133 TSC1Q92574 1164 aa9.54□□□□□ -0.88
SEM1-217ENST00000617133 USB1Q9BQ65 265 aaKnown RBP9.54□□□□□ -0.88
SEM1-217ENST00000617133 CTDSPL2Q05D32 466 aa9.53□□□□□ -0.88
SEM1-217ENST00000617133 ZPR1O75312 459 aa9.52□□□□□ -0.89
SEM1-217ENST00000617133 TJAP1Q5JTD0 557 aa9.52□□□□□ -0.89
SEM1-217ENST00000617133 MTMR14Q8NCE2 650 aa9.52□□□□□ -0.89
SEM1-217ENST00000617133 TLL1O43897 1013 aa9.51□□□□□ -0.89
SEM1-217ENST00000617133 SPSB2Q99619 263 aa9.51□□□□□ -0.89
SEM1-217ENST00000617133 IL21Q9HBE4 155 aa9.51□□□□□ -0.89
SEM1-217ENST00000617133 HCSTQ9UBK5 93 aa9.51□□□□□ -0.89
SEM1-217ENST00000617133 UBTFP17480 764 aaKnown RBP9.5□□□□□ -0.89
SEM1-217ENST00000617133 DESI1Q6ICB0 168 aa9.5□□□□□ -0.89
SEM1-217ENST00000617133 ZNF516Q92618 1163 aa9.5□□□□□ -0.89
SEM1-217ENST00000617133 FAM160A2Q8N612 972 aaPredicted RBP9.49□□□□□ -0.89
SEM1-217ENST00000617133 LRRN4Q8WUT4 740 aa9.49□□□□□ -0.89
SEM1-217ENST00000617133 ZMYND15Q9H091 742 aa9.49□□□□□ -0.89
SEM1-217ENST00000617133 SOCS7O14512 581 aa9.48□□□□□ -0.89
SEM1-217ENST00000617133 PER1O15534 1290 aaPredicted RBP9.48□□□□□ -0.89
SEM1-217ENST00000617133 MSS51Q4VC12 460 aa9.48□□□□□ -0.89
SEM1-217ENST00000617133 CLUAP1Q96AJ1 413 aa9.48□□□□□ -0.89
SEM1-217ENST00000617133 HMX1Q9NP08 348 aaPredicted RBP9.48□□□□□ -0.89
SEM1-217ENST00000617133 ADH1BP00325 375 aa9.47□□□□□ -0.89
SEM1-217ENST00000617133 JUNDP17535 347 aa9.47□□□□□ -0.89
SEM1-217ENST00000617133 POM121Q96HA1 1249 aa9.47□□□□□ -0.89
SEM1-217ENST00000617133 PRDM9Q9NQV7 894 aa9.47□□□□□ -0.89
SEM1-217ENST00000617133 MMRN1Q13201 1228 aa9.46□□□□□ -0.9
SEM1-217ENST00000617133 GJD4Q96KN9 370 aaPredicted RBP9.46□□□□□ -0.9
SEM1-217ENST00000617133 LYPD8Q6UX82 237 aa9.45□□□□□ -0.9
SEM1-217ENST00000617133 COG6Q9Y2V7 657 aa9.45□□□□□ -0.9
SEM1-217ENST00000617133 APBB1O00213 710 aa9.44□□□□□ -0.9
SEM1-217ENST00000617133 DXOO77932 396 aaKnown RBP9.44□□□□□ -0.9
SEM1-217ENST00000617133 TRIM34Q9BYJ4 488 aa9.44□□□□□ -0.9
SEM1-217ENST00000617133 A6NJR5 290 aa9.43□□□□□ -0.9
SEM1-217ENST00000617133 MMP16P51512 607 aa9.43□□□□□ -0.9
SEM1-217ENST00000617133 PTPRNQ16849 979 aa9.43□□□□□ -0.9
SEM1-217ENST00000617133 NKX2-3Q8TAU0 364 aa9.43□□□□□ -0.9
SEM1-217ENST00000617133 RAD21O60216 631 aa9.42□□□□□ -0.9
SEM1-217ENST00000617133 ITGBL1O95965 494 aaPredicted RBP9.42□□□□□ -0.9
SEM1-217ENST00000617133 EPS8L1Q8TE68 723 aa9.42□□□□□ -0.9
SEM1-217ENST00000617133 SLC6A16Q9GZN6 736 aa9.42□□□□□ -0.9
SEM1-217ENST00000617133 GDPD2Q9HCC8 539 aa9.42□□□□□ -0.9
SEM1-217ENST00000617133 TBC1D2BQ9UPU7 963 aa9.42□□□□□ -0.9
SEM1-217ENST00000617133 NR6A1Q15406 480 aa9.41□□□□□ -0.9
SEM1-217ENST00000617133 F12P00748 615 aaPredicted RBP9.4□□□□□ -0.9
SEM1-217ENST00000617133 KCNC4Q03721 635 aa9.4□□□□□ -0.9
SEM1-217ENST00000617133 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
SEM1-217ENST00000617133 NISCHQ9Y2I1 1504 aa9.4□□□□□ -0.91
SEM1-217ENST00000617133 S1PR4O95977 384 aa9.39□□□□□ -0.91
SEM1-217ENST00000617133 PROSER2Q86WR7 435 aaPredicted RBP9.39□□□□□ -0.91
SEM1-217ENST00000617133 NUDT12Q9BQG2 462 aa9.39□□□□□ -0.91
SEM1-217ENST00000617133 PRM3Q9NNZ6 103 aa9.39□□□□□ -0.91
SEM1-217ENST00000617133 MAP10Q9P2G4 905 aa9.39□□□□□ -0.91
SEM1-217ENST00000617133 GPR37L1O60883 481 aa9.38□□□□□ -0.91
SEM1-217ENST00000617133 CCNYL3P0C7X3 344 aa9.38□□□□□ -0.91
SEM1-217ENST00000617133 ABL2P42684 1182 aa9.38□□□□□ -0.91
SEM1-217ENST00000617133 SUPT5HO00267 1087 aaKnown RBP9.37□□□□□ -0.91
SEM1-217ENST00000617133 FNBP4Q8N3X1 1017 aaPredicted RBP9.37□□□□□ -0.91
SEM1-217ENST00000617133 TRAK2O60296 914 aa9.36□□□□□ -0.91
SEM1-217ENST00000617133 CTHP32929 405 aa9.36□□□□□ -0.91
SEM1-217ENST00000617133 EVA1BQ9NVM1 165 aa9.36□□□□□ -0.91
SEM1-217ENST00000617133 KCNH2Q12809 1159 aa9.35□□□□□ -0.91
SEM1-217ENST00000617133 CCDC24Q8N4L8 307 aa9.34□□□□□ -0.91
SEM1-217ENST00000617133 IRF5Q13568 498 aa9.33□□□□□ -0.92
SEM1-217ENST00000617133 FCF1Q9Y324 198 aaKnown RBP9.33□□□□□ -0.92
SEM1-217ENST00000617133 PPEF1O14829 653 aaPredicted RBP9.32□□□□□ -0.92
SEM1-217ENST00000617133 FKBPLQ9UIM3 349 aa9.32□□□□□ -0.92
SEM1-217ENST00000617133 PTCRAQ6ISU1 281 aaPredicted RBP9.31□□□□□ -0.92
SEM1-217ENST00000617133 PNMA1Q8ND90 353 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms