RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 CABP1Q9NZU7 370 aa18.03■□□□□ 0.48
EPHB4-210ENST00000616502 SAMD9LQ8IVG5 1584 aa18.03■□□□□ 0.48
EPHB4-210ENST00000616502 PRAG1Q86YV5 1406 aa18.03■□□□□ 0.48
EPHB4-210ENST00000616502 TBC1D2Q9BYX2 928 aa18.03■□□□□ 0.48
EPHB4-210ENST00000616502 RRAGDQ9NQL2 400 aaPredicted RBP18.02■□□□□ 0.48
EPHB4-210ENST00000616502 MCM4P33991 863 aa18.02■□□□□ 0.47
EPHB4-210ENST00000616502 NCKAP5LQ9HCH0 1330 aa18.02■□□□□ 0.47
EPHB4-210ENST00000616502 A2MP01023 1474 aa18.01■□□□□ 0.47
EPHB4-210ENST00000616502 RALGAPBQ86X10 1494 aa18.01■□□□□ 0.47
EPHB4-210ENST00000616502 GBP4Q96PP9 640 aa18■□□□□ 0.47
EPHB4-210ENST00000616502 UGGT1Q9NYU2 1555 aa18■□□□□ 0.47
EPHB4-210ENST00000616502 GCC2Q8IWJ2 1684 aa18■□□□□ 0.47
EPHB4-210ENST00000616502 PDE3AQ14432 1141 aa18■□□□□ 0.47
EPHB4-210ENST00000616502 WDR7Q9Y4E6 1490 aa18■□□□□ 0.47
EPHB4-210ENST00000616502 HDGFL2Q7Z4V5 671 aaPredicted RBP18■□□□□ 0.47
EPHB4-210ENST00000616502 TSR2Q969E8 191 aaKnown RBP18■□□□□ 0.47
EPHB4-210ENST00000616502 EVC2Q86UK5 1308 aa18■□□□□ 0.47
EPHB4-210ENST00000616502 APBB1O00213 710 aa17.99■□□□□ 0.47
EPHB4-210ENST00000616502 TCP11L2Q8N4U5 519 aa17.99■□□□□ 0.47
EPHB4-210ENST00000616502 CARD14Q9BXL6 1004 aa17.99■□□□□ 0.47
EPHB4-210ENST00000616502 MSNP26038 577 aaKnown RBP17.99■□□□□ 0.47
EPHB4-210ENST00000616502 TNNQ9UQP3 1299 aa17.99■□□□□ 0.47
EPHB4-210ENST00000616502 CDC42BPAQ5VT25 1732 aa17.99■□□□□ 0.47
EPHB4-210ENST00000616502 XRCC6P12956 609 aaKnown RBP eCLIP17.98■□□□□ 0.47
EPHB4-210ENST00000616502 PKNOX2Q96KN3 472 aa17.97■□□□□ 0.47
EPHB4-210ENST00000616502 LNPKQ9C0E8 428 aa17.97■□□□□ 0.47
EPHB4-210ENST00000616502 ZKSCAN2Q63HK3 967 aa17.97■□□□□ 0.47
EPHB4-210ENST00000616502 DDX11L8A8MPP1 907 aa17.97■□□□□ 0.47
EPHB4-210ENST00000616502 PLA2R1Q13018 1463 aa17.96■□□□□ 0.47
EPHB4-210ENST00000616502 MRE11P49959 708 aa17.96■□□□□ 0.47
EPHB4-210ENST00000616502 WWC1Q8IX03 1113 aa17.96■□□□□ 0.47
EPHB4-210ENST00000616502 DMRT2Q9Y5R5 561 aa17.96■□□□□ 0.47
EPHB4-210ENST00000616502 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
EPHB4-210ENST00000616502 THUMPD2Q9BTF0 503 aaKnown RBP17.95■□□□□ 0.46
EPHB4-210ENST00000616502 BCORL1Q5H9F3 1711 aa17.95■□□□□ 0.46
EPHB4-210ENST00000616502 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
EPHB4-210ENST00000616502 ZNF428Q96B54 188 aa17.95■□□□□ 0.46
EPHB4-210ENST00000616502 CDK19Q9BWU1 502 aa17.95■□□□□ 0.46
EPHB4-210ENST00000616502 TERF2IPQ9NYB0 399 aa17.94■□□□□ 0.46
EPHB4-210ENST00000616502 PCDHB15Q9Y5E8 787 aa17.94■□□□□ 0.46
EPHB4-210ENST00000616502 RRS1Q15050 365 aaKnown RBP17.94■□□□□ 0.46
EPHB4-210ENST00000616502 AMER1Q5JTC6 1135 aaPredicted RBP17.93■□□□□ 0.46
EPHB4-210ENST00000616502 PTMAP06454 111 aaKnown RBP17.93■□□□□ 0.46
EPHB4-210ENST00000616502 DDX49Q9Y6V7 483 aaKnown RBP17.93■□□□□ 0.46
EPHB4-210ENST00000616502 GRPEL1Q9HAV7 217 aa17.92■□□□□ 0.46
EPHB4-210ENST00000616502 ZRANB1Q9UGI0 708 aa17.92■□□□□ 0.46
EPHB4-210ENST00000616502 RUNDC1Q96C34 613 aa17.92■□□□□ 0.46
EPHB4-210ENST00000616502 DNTTIP2Q5QJE6 756 aaKnown RBP17.92■□□□□ 0.46
EPHB4-210ENST00000616502 ANKRD45Q5TZF3 282 aa17.92■□□□□ 0.46
EPHB4-210ENST00000616502 FOXD4L5Q5VV16 416 aaPredicted RBP17.92■□□□□ 0.46
EPHB4-210ENST00000616502 FOXD4L4Q8WXT5 416 aaPredicted RBP17.92■□□□□ 0.46
EPHB4-210ENST00000616502 NSD3Q9BZ95 1437 aa17.91■□□□□ 0.46
EPHB4-210ENST00000616502 ESPNB1AK53 854 aa17.9■□□□□ 0.46
EPHB4-210ENST00000616502 NGDNQ8NEJ9 315 aaKnown RBP17.9■□□□□ 0.46
EPHB4-210ENST00000616502 NECTIN2Q92692 538 aa17.9■□□□□ 0.46
EPHB4-210ENST00000616502 NKTRP30414 1462 aaKnown RBP17.9■□□□□ 0.46
EPHB4-210ENST00000616502 TBC1D32Q96NH3 1257 aa17.9■□□□□ 0.46
EPHB4-210ENST00000616502 RARSP54136 660 aaKnown RBP17.89■□□□□ 0.46
EPHB4-210ENST00000616502 RLBP1P12271 317 aa17.89■□□□□ 0.45
EPHB4-210ENST00000616502 DUOX2Q9NRD8 1548 aa17.89■□□□□ 0.45
EPHB4-210ENST00000616502 A0A0G2JS52 829 aa17.88■□□□□ 0.45
EPHB4-210ENST00000616502 RIPK4P57078 832 aa17.88■□□□□ 0.45
EPHB4-210ENST00000616502 FAM13BQ9NYF5 915 aa17.86■□□□□ 0.45
EPHB4-210ENST00000616502 UHRF1BP1Q6BDS2 1440 aa17.86■□□□□ 0.45
EPHB4-210ENST00000616502 RBM10P98175 930 aaKnown RBP17.86■□□□□ 0.45
EPHB4-210ENST00000616502 EXOSC9Q06265 439 aaKnown RBP17.86■□□□□ 0.45
EPHB4-210ENST00000616502 SHANK2Q9UPX8 1470 aa17.86■□□□□ 0.45
EPHB4-210ENST00000616502 KDM5CP41229 1560 aa17.86■□□□□ 0.45
EPHB4-210ENST00000616502 IPO8O15397 1037 aaKnown RBP17.85■□□□□ 0.45
EPHB4-210ENST00000616502 XPCQ01831 940 aaPredicted RBP17.85■□□□□ 0.45
EPHB4-210ENST00000616502 PLCB2Q00722 1185 aa17.85■□□□□ 0.45
EPHB4-210ENST00000616502 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
EPHB4-210ENST00000616502 C14orf93Q9H972 538 aaKnown RBP17.85■□□□□ 0.45
EPHB4-210ENST00000616502 YEATS2Q9ULM3 1422 aa17.85■□□□□ 0.45
EPHB4-210ENST00000616502 DCTN1Q14203 1278 aa17.84■□□□□ 0.45
EPHB4-210ENST00000616502 CDC42BPBQ9Y5S2 1711 aa17.84■□□□□ 0.45
EPHB4-210ENST00000616502 NME9Q86XW9 330 aa17.84■□□□□ 0.45
EPHB4-210ENST00000616502 DDX19BQ9UMR2 479 aa17.84■□□□□ 0.45
EPHB4-210ENST00000616502 MVPQ14764 893 aaKnown RBP17.83■□□□□ 0.45
EPHB4-210ENST00000616502 ZCCHC11Q5TAX3 1644 aaKnown RBP17.83■□□□□ 0.45
EPHB4-210ENST00000616502 ZMYND15Q9H091 742 aa17.83■□□□□ 0.44
EPHB4-210ENST00000616502 EMILIN1Q9Y6C2 1016 aa17.83■□□□□ 0.44
EPHB4-210ENST00000616502 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
EPHB4-210ENST00000616502 FOXD4L6Q3SYB3 417 aaPredicted RBP17.82■□□□□ 0.44
EPHB4-210ENST00000616502 FOXD4L3Q6VB84 417 aaPredicted RBP17.82■□□□□ 0.44
EPHB4-210ENST00000616502 C1orf115Q9H7X2 142 aa17.82■□□□□ 0.44
EPHB4-210ENST00000616502 NGEFQ8N5V2 710 aa17.82■□□□□ 0.44
EPHB4-210ENST00000616502 PRKAR2BP31323 418 aa17.82■□□□□ 0.44
EPHB4-210ENST00000616502 NASPP49321 788 aaPredicted RBP17.82■□□□□ 0.44
EPHB4-210ENST00000616502 BLMP54132 1417 aaPredicted RBP17.81■□□□□ 0.44
EPHB4-210ENST00000616502 SLC52A1Q9NWF4 448 aa17.81■□□□□ 0.44
EPHB4-210ENST00000616502 NOL8Q76FK4 1167 aaKnown RBP17.81■□□□□ 0.44
EPHB4-210ENST00000616502 EID1Q9Y6B2 187 aa17.8■□□□□ 0.44
EPHB4-210ENST00000616502 SCAF11Q99590 1463 aaKnown RBP17.8■□□□□ 0.44
EPHB4-210ENST00000616502 MCTP1Q6DN14 999 aa17.8■□□□□ 0.44
EPHB4-210ENST00000616502 NOB1Q9ULX3 412 aaKnown RBP17.8■□□□□ 0.44
EPHB4-210ENST00000616502 ZMYM4Q5VZL5 1548 aa17.79■□□□□ 0.44
EPHB4-210ENST00000616502 ADGBQ8N7X0 1667 aa17.79■□□□□ 0.44
EPHB4-210ENST00000616502 CLCN1P35523 988 aa17.79■□□□□ 0.44
EPHB4-210ENST00000616502 R3HCC1Q9Y3T6 440 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms