RNA–Protein interactions for RNA: ENST00000614239.1

LHX1-201, Transcript of LIM homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX1, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-201ENST00000614239 ADGBQ8N7X0 1667 aa17.58■□□□□ 0.41
LHX1-201ENST00000614239 ADGRL2O95490 1459 aa17.58■□□□□ 0.4
LHX1-201ENST00000614239 PLCB2Q00722 1185 aa17.58■□□□□ 0.4
LHX1-201ENST00000614239 CAVIN1Q6NZI2 390 aaKnown RBP17.58■□□□□ 0.4
LHX1-201ENST00000614239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.58■□□□□ 0.4
LHX1-201ENST00000614239 TBC1D32Q96NH3 1257 aa17.57■□□□□ 0.4
LHX1-201ENST00000614239 CCDC94Q9BW85 323 aaPredicted RBP17.57■□□□□ 0.4
LHX1-201ENST00000614239 APAF1O14727 1248 aa17.56■□□□□ 0.4
LHX1-201ENST00000614239 GGT6Q6P531 493 aa17.56■□□□□ 0.4
LHX1-201ENST00000614239 MBD5Q9P267 1494 aa17.56■□□□□ 0.4
LHX1-201ENST00000614239 SAMD9LQ8IVG5 1584 aa17.56■□□□□ 0.4
LHX1-201ENST00000614239 ZCCHC11Q5TAX3 1644 aaKnown RBP17.55■□□□□ 0.4
LHX1-201ENST00000614239 PREX2Q70Z35 1606 aa17.55■□□□□ 0.4
LHX1-201ENST00000614239 CERS3Q8IU89 383 aa17.55■□□□□ 0.4
LHX1-201ENST00000614239 DYNC1I1O14576 645 aa17.54■□□□□ 0.4
LHX1-201ENST00000614239 CFAP70Q5T0N1 1121 aa17.54■□□□□ 0.4
LHX1-201ENST00000614239 FOXD4L5Q5VV16 416 aaPredicted RBP17.54■□□□□ 0.4
LHX1-201ENST00000614239 FOXD4L4Q8WXT5 416 aaPredicted RBP17.54■□□□□ 0.4
LHX1-201ENST00000614239 EFCAB2Q5VUJ9 269 aa17.54■□□□□ 0.4
LHX1-201ENST00000614239 ZNF830Q96NB3 372 aaPredicted RBP17.54■□□□□ 0.4
LHX1-201ENST00000614239 TRERF1Q96PN7 1200 aa17.54■□□□□ 0.4
LHX1-201ENST00000614239 TRAK1Q9UPV9 953 aa17.53■□□□□ 0.4
LHX1-201ENST00000614239 ZSCAN20P17040 1043 aaPredicted RBP17.53■□□□□ 0.4
LHX1-201ENST00000614239 IPO4Q8TEX9 1081 aaKnown RBP17.53■□□□□ 0.4
LHX1-201ENST00000614239 BCORL1Q5H9F3 1711 aa17.52■□□□□ 0.4
LHX1-201ENST00000614239 SPAG9O60271 1321 aaKnown RBP17.52■□□□□ 0.4
LHX1-201ENST00000614239 PDZRN3Q9UPQ7 1066 aa17.52■□□□□ 0.4
LHX1-201ENST00000614239 UHRF1BP1LA0JNW5 1464 aa17.52■□□□□ 0.4
LHX1-201ENST00000614239 ARHGAP5Q13017 1502 aa17.52■□□□□ 0.4
LHX1-201ENST00000614239 ISY1Q9ULR0 285 aaKnown RBP17.52■□□□□ 0.4
LHX1-201ENST00000614239 PLEKHH2Q8IVE3 1493 aa17.52■□□□□ 0.39
LHX1-201ENST00000614239 MCTP1Q6DN14 999 aa17.52■□□□□ 0.39
LHX1-201ENST00000614239 PER1O15534 1290 aaPredicted RBP17.51■□□□□ 0.39
LHX1-201ENST00000614239 SHANK2Q9UPX8 1470 aa17.51■□□□□ 0.39
LHX1-201ENST00000614239 SKOR2Q2VWA4 1001 aaPredicted RBP17.51■□□□□ 0.39
LHX1-201ENST00000614239 SASS6Q6UVJ0 657 aa17.51■□□□□ 0.39
LHX1-201ENST00000614239 CSPP1Q1MSJ5 1256 aa17.5■□□□□ 0.39
LHX1-201ENST00000614239 TMEM132EQ6IEE7 984 aa17.5■□□□□ 0.39
LHX1-201ENST00000614239 TESK2Q96S53 571 aa17.5■□□□□ 0.39
LHX1-201ENST00000614239 LRPPRCP42704 1394 aaKnown RBP17.49■□□□□ 0.39
LHX1-201ENST00000614239 ARHGEF5Q12774 1597 aa17.49■□□□□ 0.39
LHX1-201ENST00000614239 PPP2R1AP30153 589 aa17.49■□□□□ 0.39
LHX1-201ENST00000614239 SYCP2Q9BX26 1530 aa17.49■□□□□ 0.39
LHX1-201ENST00000614239 KCNJ4P48050 445 aa17.49■□□□□ 0.39
LHX1-201ENST00000614239 DUSP27Q5VZP5 1158 aa17.49■□□□□ 0.39
LHX1-201ENST00000614239 CCDC141Q6ZP82 1450 aa17.48■□□□□ 0.39
LHX1-201ENST00000614239 SSFA2P28290 1259 aa17.47■□□□□ 0.39
LHX1-201ENST00000614239 TMEM51Q9NW97 253 aa17.47■□□□□ 0.39
LHX1-201ENST00000614239 STK26Q9P289 416 aa17.47■□□□□ 0.39
LHX1-201ENST00000614239 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
LHX1-201ENST00000614239 MYO5CQ9NQX4 1742 aa17.46■□□□□ 0.39
LHX1-201ENST00000614239 FOXD4L6Q3SYB3 417 aaPredicted RBP17.46■□□□□ 0.38
LHX1-201ENST00000614239 FOXD4L3Q6VB84 417 aaPredicted RBP17.46■□□□□ 0.38
LHX1-201ENST00000614239 RSPH4AQ5TD94 716 aa17.45■□□□□ 0.38
LHX1-201ENST00000614239 ARHGEF12Q9NZN5 1544 aa17.45■□□□□ 0.38
LHX1-201ENST00000614239 UTP14CQ5TAP6 766 aaKnown RBP17.44■□□□□ 0.38
LHX1-201ENST00000614239 ERICH4A6NGS2 130 aa17.44■□□□□ 0.38
LHX1-201ENST00000614239 LETM1O95202 739 aaPredicted RBP17.44■□□□□ 0.38
LHX1-201ENST00000614239 ZBTB9Q96C00 473 aa17.44■□□□□ 0.38
LHX1-201ENST00000614239 PLCH2O75038 1416 aa17.43■□□□□ 0.38
LHX1-201ENST00000614239 RBM27Q9P2N5 1060 aaKnown RBP17.43■□□□□ 0.38
LHX1-201ENST00000614239 KIF20AO95235 890 aa17.43■□□□□ 0.38
LHX1-201ENST00000614239 KIAA2012Q0VF49 1180 aa17.43■□□□□ 0.38
LHX1-201ENST00000614239 C17orf53Q8N3J3 647 aaPredicted RBP17.43■□□□□ 0.38
LHX1-201ENST00000614239 SPINK5Q9NQ38 1064 aaPredicted RBP17.43■□□□□ 0.38
LHX1-201ENST00000614239 ATP2B3Q16720 1220 aa17.42■□□□□ 0.38
LHX1-201ENST00000614239 ZKSCAN5Q9Y2L8 839 aa17.42■□□□□ 0.38
LHX1-201ENST00000614239 CGNL1Q0VF96 1302 aa17.42■□□□□ 0.38
LHX1-201ENST00000614239 ERBINQ96RT1 1412 aa17.42■□□□□ 0.38
LHX1-201ENST00000614239 GTPBP4Q9BZE4 634 aaKnown RBP17.42■□□□□ 0.38
LHX1-201ENST00000614239 NOL7Q9UMY1 257 aaKnown RBP17.42■□□□□ 0.38
LHX1-201ENST00000614239 PDCL2Q8N4E4 241 aa17.41■□□□□ 0.38
LHX1-201ENST00000614239 RALGAPBQ86X10 1494 aa17.41■□□□□ 0.38
LHX1-201ENST00000614239 U2AF2P26368 475 aaKnown RBP eCLIP17.41■□□□□ 0.38
LHX1-201ENST00000614239 PMFBP1Q8TBY8 1022 aa17.41■□□□□ 0.38
LHX1-201ENST00000614239 PPP1R9BQ96SB3 815 aa17.41■□□□□ 0.38
LHX1-201ENST00000614239 RBSNQ9H1K0 784 aa17.41■□□□□ 0.38
LHX1-201ENST00000614239 MORC1Q86VD1 984 aa17.4■□□□□ 0.38
LHX1-201ENST00000614239 SLC12A5Q9H2X9 1139 aa17.4■□□□□ 0.38
LHX1-201ENST00000614239 PRIM1P49642 420 aaKnown RBP17.4■□□□□ 0.38
LHX1-201ENST00000614239 FTSJ3Q8IY81 847 aaKnown RBP17.4■□□□□ 0.38
LHX1-201ENST00000614239 RWDD1Q9H446 243 aaPredicted RBP17.4■□□□□ 0.38
LHX1-201ENST00000614239 TNNQ9UQP3 1299 aa17.4■□□□□ 0.38
LHX1-201ENST00000614239 PRPF40AO75400 957 aaKnown RBP17.39■□□□□ 0.37
LHX1-201ENST00000614239 PRAG1Q86YV5 1406 aa17.39■□□□□ 0.37
LHX1-201ENST00000614239 U2SURPO15042 1029 aaKnown RBP17.39■□□□□ 0.37
LHX1-201ENST00000614239 TERF1P54274 439 aa17.39■□□□□ 0.37
LHX1-201ENST00000614239 CCDC39Q9UFE4 941 aa17.38■□□□□ 0.37
LHX1-201ENST00000614239 SYCE3A1L190 88 aa17.38■□□□□ 0.37
LHX1-201ENST00000614239 KIF3AQ9Y496 699 aa17.38■□□□□ 0.37
LHX1-201ENST00000614239 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
LHX1-201ENST00000614239 CDCA8Q53HL2 280 aa17.38■□□□□ 0.37
LHX1-201ENST00000614239 FAM135AQ9P2D6 1515 aa17.38■□□□□ 0.37
LHX1-201ENST00000614239 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.37■□□□□ 0.37
LHX1-201ENST00000614239 TNNT3P45378 269 aaPredicted RBP17.37■□□□□ 0.37
LHX1-201ENST00000614239 ZFP91Q96JP5 570 aaPredicted RBP17.37■□□□□ 0.37
LHX1-201ENST00000614239 PCDHB15Q9Y5E8 787 aa17.37■□□□□ 0.37
LHX1-201ENST00000614239 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
LHX1-201ENST00000614239 CHAF1AQ13111 956 aaPredicted RBP17.37■□□□□ 0.37
LHX1-201ENST00000614239 WDR7Q9Y4E6 1490 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms