RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 UPF2Q9HAU5 1272 aaKnown RBP21.64■■□□□ 1.05
TNIP1-220ENST00000610535 ASXL2Q76L83 1435 aa21.64■■□□□ 1.05
TNIP1-220ENST00000610535 SLC12A5Q9H2X9 1139 aa21.62■■□□□ 1.05
TNIP1-220ENST00000610535 SLC24A1O60721 1099 aa21.6■■□□□ 1.05
TNIP1-220ENST00000610535 UGGT1Q9NYU2 1555 aa21.6■■□□□ 1.05
TNIP1-220ENST00000610535 CHGAP10645 457 aaKnown RBP21.6■■□□□ 1.05
TNIP1-220ENST00000610535 ADGRL1O94910 1474 aa21.59■■□□□ 1.05
TNIP1-220ENST00000610535 NSD3Q9BZ95 1437 aa21.59■■□□□ 1.05
TNIP1-220ENST00000610535 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
TNIP1-220ENST00000610535 RWDD1Q9H446 243 aaPredicted RBP21.58■■□□□ 1.05
TNIP1-220ENST00000610535 MTHFSP49914 203 aa21.57■■□□□ 1.04
TNIP1-220ENST00000610535 GGT6Q6P531 493 aa21.57■■□□□ 1.04
TNIP1-220ENST00000610535 WDR63Q8IWG1 891 aa21.57■■□□□ 1.04
TNIP1-220ENST00000610535 RRAGDQ9NQL2 400 aaPredicted RBP21.57■■□□□ 1.04
TNIP1-220ENST00000610535 TRAK1Q9UPV9 953 aa21.57■■□□□ 1.04
TNIP1-220ENST00000610535 KANK1Q14678 1352 aa21.56■■□□□ 1.04
TNIP1-220ENST00000610535 ABCA6Q8N139 1617 aa21.56■■□□□ 1.04
TNIP1-220ENST00000610535 KIAA1210Q9ULL0 1709 aa21.55■■□□□ 1.04
TNIP1-220ENST00000610535 AAMPQ13685 434 aa21.55■■□□□ 1.04
TNIP1-220ENST00000610535 ZFYVE16Q7Z3T8 1539 aa21.55■■□□□ 1.04
TNIP1-220ENST00000610535 RSPH6AQ9H0K4 717 aa21.55■■□□□ 1.04
TNIP1-220ENST00000610535 GZF1Q9H116 711 aaPredicted RBP21.55■■□□□ 1.04
TNIP1-220ENST00000610535 SHPRHQ149N8 1683 aa21.54■■□□□ 1.04
TNIP1-220ENST00000610535 MAP3K4Q9Y6R4 1608 aa21.54■■□□□ 1.04
TNIP1-220ENST00000610535 L1TD1Q5T7N2 865 aaKnown RBP21.54■■□□□ 1.04
TNIP1-220ENST00000610535 RTEL1-TNFRSF6BF6WH68 1400 aa21.53■■□□□ 1.04
TNIP1-220ENST00000610535 TET3O43151 1660 aa21.53■■□□□ 1.04
TNIP1-220ENST00000610535 RAPGEF3O95398 923 aa21.53■■□□□ 1.04
TNIP1-220ENST00000610535 MVPQ14764 893 aaKnown RBP21.52■■□□□ 1.04
TNIP1-220ENST00000610535 IQSEC2Q5JU85 1478 aa21.52■■□□□ 1.04
TNIP1-220ENST00000610535 XRCC6P12956 609 aaKnown RBP eCLIP21.51■■□□□ 1.03
TNIP1-220ENST00000610535 MFAP1P55081 439 aaKnown RBP21.51■■□□□ 1.03
TNIP1-220ENST00000610535 MCM4P33991 863 aa21.5■■□□□ 1.03
TNIP1-220ENST00000610535 NUTM2DQ5VT03 806 aaPredicted RBP21.5■■□□□ 1.03
TNIP1-220ENST00000610535 ATP7AQ04656 1500 aa21.5■■□□□ 1.03
TNIP1-220ENST00000610535 TMEM132EQ6IEE7 984 aa21.5■■□□□ 1.03
TNIP1-220ENST00000610535 TSR2Q969E8 191 aaKnown RBP21.5■■□□□ 1.03
TNIP1-220ENST00000610535 MYOM2P54296 1465 aa21.5■■□□□ 1.03
TNIP1-220ENST00000610535 U2AF1L5P0DN76 240 aaPredicted RBP21.49■■□□□ 1.03
TNIP1-220ENST00000610535 U2AF1Q01081 240 aaKnown RBP eCLIP21.49■■□□□ 1.03
TNIP1-220ENST00000610535 FTSJ3Q8IY81 847 aaKnown RBP21.49■■□□□ 1.03
TNIP1-220ENST00000610535 C22orf23Q9BZE7 217 aa21.49■■□□□ 1.03
TNIP1-220ENST00000610535 DEPDC5O75140 1603 aa21.49■■□□□ 1.03
TNIP1-220ENST00000610535 MYH16Q9H6N6 1097 aa21.49■■□□□ 1.03
TNIP1-220ENST00000610535 ZKSCAN2Q63HK3 967 aa21.49■■□□□ 1.03
TNIP1-220ENST00000610535 DZIP1LQ8IYY4 767 aaKnown RBP21.49■■□□□ 1.03
TNIP1-220ENST00000610535 CCDC27Q2M243 656 aa21.48■■□□□ 1.03
TNIP1-220ENST00000610535 UBE2Q2Q8WVN8 375 aa21.48■■□□□ 1.03
TNIP1-220ENST00000610535 ZMYM3Q14202 1370 aa21.48■■□□□ 1.03
TNIP1-220ENST00000610535 CYB5RLQ6IPT4 315 aa21.48■■□□□ 1.03
TNIP1-220ENST00000610535 PANK2Q9BZ23 570 aa21.48■■□□□ 1.03
TNIP1-220ENST00000610535 SBNO2Q9Y2G9 1366 aa21.48■■□□□ 1.03
TNIP1-220ENST00000610535 CFAP53Q96M91 514 aa21.47■■□□□ 1.03
TNIP1-220ENST00000610535 GOLGA6L3A6NEY3 463 aa21.47■■□□□ 1.03
TNIP1-220ENST00000610535 NOS1P29475 1434 aa21.46■■□□□ 1.03
TNIP1-220ENST00000610535 VWDEQ8N2E2 1590 aa21.45■■□□□ 1.02
TNIP1-220ENST00000610535 ZNF518AQ6AHZ1 1483 aa21.45■■□□□ 1.02
TNIP1-220ENST00000610535 FSD2A1L4K1 749 aa21.44■■□□□ 1.02
TNIP1-220ENST00000610535 CFAP65Q6ZU64 1925 aaKnown RBP21.44■■□□□ 1.02
TNIP1-220ENST00000610535 SMC4Q9NTJ3 1288 aa21.44■■□□□ 1.02
TNIP1-220ENST00000610535 CD109Q6YHK3 1445 aa21.44■■□□□ 1.02
TNIP1-220ENST00000610535 EXOSC9Q06265 439 aaKnown RBP21.43■■□□□ 1.02
TNIP1-220ENST00000610535 CHMP5Q9NZZ3 219 aa21.43■■□□□ 1.02
TNIP1-220ENST00000610535 TRIM27P14373 513 aa21.43■■□□□ 1.02
TNIP1-220ENST00000610535 TRAK2O60296 914 aa21.42■■□□□ 1.02
TNIP1-220ENST00000610535 ITPRIPQ8IWB1 547 aa21.42■■□□□ 1.02
TNIP1-220ENST00000610535 ABCA9Q8IUA7 1624 aa21.42■■□□□ 1.02
TNIP1-220ENST00000610535 KIF1BO60333 1816 aa21.41■■□□□ 1.02
TNIP1-220ENST00000610535 SSH1Q8WYL5 1049 aa21.41■■□□□ 1.02
TNIP1-220ENST00000610535 MROH2AA6NES4 1674 aa21.4■■□□□ 1.02
TNIP1-220ENST00000610535 C14orf93Q9H972 538 aaKnown RBP21.4■■□□□ 1.02
TNIP1-220ENST00000610535 NEURL4Q96JN8 1562 aa21.4■■□□□ 1.02
TNIP1-220ENST00000610535 MYO3AQ8NEV4 1616 aa21.4■■□□□ 1.02
TNIP1-220ENST00000610535 NRXN1Q9ULB1 1477 aa21.4■■□□□ 1.02
TNIP1-220ENST00000610535 HDAC1Q13547 482 aaPredicted RBP21.38■■□□□ 1.01
TNIP1-220ENST00000610535 U2SURPO15042 1029 aaKnown RBP21.38■■□□□ 1.01
TNIP1-220ENST00000610535 MROH1Q8NDA8 1641 aa21.38■■□□□ 1.01
TNIP1-220ENST00000610535 NOB1Q9ULX3 412 aaKnown RBP21.37■■□□□ 1.01
TNIP1-220ENST00000610535 IFT172Q9UG01 1749 aa21.37■■□□□ 1.01
TNIP1-220ENST00000610535 INO80Q9ULG1 1556 aaPredicted RBP21.37■■□□□ 1.01
TNIP1-220ENST00000610535 ATF7IPQ6VMQ6 1270 aa21.36■■□□□ 1.01
TNIP1-220ENST00000610535 DDX19BQ9UMR2 479 aa21.36■■□□□ 1.01
TNIP1-220ENST00000610535 HSCBQ8IWL3 235 aa21.35■■□□□ 1.01
TNIP1-220ENST00000610535 ZNF692Q9BU19 519 aaPredicted RBP21.35■■□□□ 1.01
TNIP1-220ENST00000610535 TMEM57Q8N5G2 664 aa21.35■■□□□ 1.01
TNIP1-220ENST00000610535 CABP2Q9NPB3 220 aa21.35■■□□□ 1.01
TNIP1-220ENST00000610535 TRIM35Q9UPQ4 493 aa21.35■■□□□ 1.01
TNIP1-220ENST00000610535 TMPOP42166 694 aaKnown RBP21.35■■□□□ 1.01
TNIP1-220ENST00000610535 SMC5Q8IY18 1101 aa21.35■■□□□ 1.01
TNIP1-220ENST00000610535 SAFB2Q14151 953 aaKnown RBP eCLIP21.34■■□□□ 1.01
TNIP1-220ENST00000610535 ARAP3Q8WWN8 1544 aa21.34■■□□□ 1.01
TNIP1-220ENST00000610535 QRICH2Q9H0J4 1663 aa21.34■■□□□ 1.01
TNIP1-220ENST00000610535 EFCAB6Q5THR3 1501 aa21.33■■□□□ 1.01
TNIP1-220ENST00000610535 NAP1L5Q96NT1 182 aaPredicted RBP21.33■■□□□ 1.01
TNIP1-220ENST00000610535 PLEKHF1Q96S99 279 aa21.33■■□□□ 1.01
TNIP1-220ENST00000610535 CT47B1P0C2W7 299 aaPredicted RBP21.33■■□□□ 1
TNIP1-220ENST00000610535 KIDINS220Q9ULH0 1771 aa21.32■■□□□ 1
TNIP1-220ENST00000610535 NCBP3Q53F19 620 aaKnown RBP21.32■■□□□ 1
TNIP1-220ENST00000610535 LNPKQ9C0E8 428 aa21.32■■□□□ 1
TNIP1-220ENST00000610535 ZBTB40Q9NUA8 1239 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms