RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 POGKQ9P215 609 aa20.51■□□□□ 0.87
HDDC2-209ENST00000609477 C1orf167Q5SNV9 1468 aa20.5■□□□□ 0.87
HDDC2-209ENST00000609477 TONSLQ96HA7 1378 aa20.5■□□□□ 0.87
HDDC2-209ENST00000609477 PLEKHH1Q9ULM0 1364 aa20.5■□□□□ 0.87
HDDC2-209ENST00000609477 BRINP3Q76B58 766 aa20.5■□□□□ 0.87
HDDC2-209ENST00000609477 TRAK1Q9UPV9 953 aa20.5■□□□□ 0.87
HDDC2-209ENST00000609477 AHDC1Q5TGY3 1603 aaPredicted RBP20.49■□□□□ 0.87
HDDC2-209ENST00000609477 PHLPP1O60346 1717 aa20.47■□□□□ 0.87
HDDC2-209ENST00000609477 ADGRB2O60241 1585 aa20.46■□□□□ 0.87
HDDC2-209ENST00000609477 ARHGEF28Q8N1W1 1705 aaKnown RBP20.45■□□□□ 0.86
HDDC2-209ENST00000609477 NBPF1Q3BBV0 1214 aa20.45■□□□□ 0.86
HDDC2-209ENST00000609477 TIMELESSQ9UNS1 1208 aa20.45■□□□□ 0.86
HDDC2-209ENST00000609477 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.86
HDDC2-209ENST00000609477 NHSL1Q5SYE7 1610 aa20.44■□□□□ 0.86
HDDC2-209ENST00000609477 FMN2Q9NZ56 1722 aa20.44■□□□□ 0.86
HDDC2-209ENST00000609477 COL16A1Q07092 1604 aaPredicted RBP20.42■□□□□ 0.86
HDDC2-209ENST00000609477 EIF3AQ14152 1382 aaKnown RBP20.42■□□□□ 0.86
HDDC2-209ENST00000609477 SAFB2Q14151 953 aaKnown RBP eCLIP20.41■□□□□ 0.86
HDDC2-209ENST00000609477 JCADQ9P266 1359 aa20.41■□□□□ 0.86
HDDC2-209ENST00000609477 ROCK2O75116 1388 aaKnown RBP20.4■□□□□ 0.86
HDDC2-209ENST00000609477 ORAI2Q96SN7 254 aa20.4■□□□□ 0.86
HDDC2-209ENST00000609477 ANKARQ7Z5J8 1434 aa20.39■□□□□ 0.85
HDDC2-209ENST00000609477 GPRASP1Q5JY77 1395 aa20.39■□□□□ 0.85
HDDC2-209ENST00000609477 ESCO1Q5FWF5 840 aa20.39■□□□□ 0.85
HDDC2-209ENST00000609477 LRRC59Q96AG4 307 aaKnown RBP20.39■□□□□ 0.85
HDDC2-209ENST00000609477 NPHP3Q7Z494 1330 aa20.37■□□□□ 0.85
HDDC2-209ENST00000609477 WASLO00401 505 aaPredicted RBP20.37■□□□□ 0.85
HDDC2-209ENST00000609477 NBPF8Q3BBV2 869 aa20.37■□□□□ 0.85
HDDC2-209ENST00000609477 KIF1AQ12756 1690 aa20.36■□□□□ 0.85
HDDC2-209ENST00000609477 SOS2Q07890 1332 aaPredicted RBP20.36■□□□□ 0.85
HDDC2-209ENST00000609477 MINK1Q8N4C8 1332 aaPredicted RBP20.36■□□□□ 0.85
HDDC2-209ENST00000609477 CENPJQ9HC77 1338 aaPredicted RBP20.35■□□□□ 0.85
HDDC2-209ENST00000609477 RALGAPBQ86X10 1494 aa20.35■□□□□ 0.85
HDDC2-209ENST00000609477 SHPRHQ149N8 1683 aa20.35■□□□□ 0.85
HDDC2-209ENST00000609477 SPATA31A6Q5VVP1 1343 aa20.34■□□□□ 0.85
HDDC2-209ENST00000609477 HIRIP3Q9BW71 556 aaPredicted RBP20.34■□□□□ 0.85
HDDC2-209ENST00000609477 MED1Q15648 1581 aaPredicted RBP20.34■□□□□ 0.85
HDDC2-209ENST00000609477 TULP4Q9NRJ4 1543 aa20.33■□□□□ 0.85
HDDC2-209ENST00000609477 NUTM2FA1L443 756 aa20.33■□□□□ 0.85
HDDC2-209ENST00000609477 CCER1Q8TC90 406 aaPredicted RBP20.33■□□□□ 0.85
HDDC2-209ENST00000609477 RGPD8O14715 1765 aaPredicted RBP20.31■□□□□ 0.84
HDDC2-209ENST00000609477 PHF8Q9UPP1 1060 aa20.31■□□□□ 0.84
HDDC2-209ENST00000609477 DISP3Q9P2K9 1392 aa20.31■□□□□ 0.84
HDDC2-209ENST00000609477 USP32Q8NFA0 1604 aa20.31■□□□□ 0.84
HDDC2-209ENST00000609477 FOXO3O43524 673 aa20.3■□□□□ 0.84
HDDC2-209ENST00000609477 CARD11Q9BXL7 1154 aa20.3■□□□□ 0.84
HDDC2-209ENST00000609477 DDX17Q92841 729 aaKnown RBP20.29■□□□□ 0.84
HDDC2-209ENST00000609477 QRICH2Q9H0J4 1663 aa20.29■□□□□ 0.84
HDDC2-209ENST00000609477 CDK19Q9BWU1 502 aa20.28■□□□□ 0.84
HDDC2-209ENST00000609477 PXDNQ92626 1479 aa20.28■□□□□ 0.84
HDDC2-209ENST00000609477 ITSN1Q15811 1721 aa20.27■□□□□ 0.84
HDDC2-209ENST00000609477 PSME1Q06323 249 aa20.27■□□□□ 0.84
HDDC2-209ENST00000609477 SBNO2Q9Y2G9 1366 aa20.26■□□□□ 0.83
HDDC2-209ENST00000609477 NUDT16Q96DE0 195 aaKnown RBP20.26■□□□□ 0.83
HDDC2-209ENST00000609477 PRR36Q9H6K5 1346 aa20.26■□□□□ 0.83
HDDC2-209ENST00000609477 ATP7BP35670 1465 aa20.25■□□□□ 0.83
HDDC2-209ENST00000609477 PNPLA6Q8IY17 1366 aa20.25■□□□□ 0.83
HDDC2-209ENST00000609477 SLC24A1O60721 1099 aa20.25■□□□□ 0.83
HDDC2-209ENST00000609477 CCDC61Q9Y6R9 512 aa20.25■□□□□ 0.83
HDDC2-209ENST00000609477 EVC2Q86UK5 1308 aa20.25■□□□□ 0.83
HDDC2-209ENST00000609477 KRT28Q7Z3Y7 464 aa20.24■□□□□ 0.83
HDDC2-209ENST00000609477 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
HDDC2-209ENST00000609477 SBNO1A3KN83 1393 aa20.22■□□□□ 0.83
HDDC2-209ENST00000609477 COL22A1Q8NFW1 1626 aaPredicted RBP20.22■□□□□ 0.83
HDDC2-209ENST00000609477 SRPK2P78362 688 aaKnown RBP20.21■□□□□ 0.83
HDDC2-209ENST00000609477 PMFBP1Q8TBY8 1022 aa20.21■□□□□ 0.83
HDDC2-209ENST00000609477 SPATA31A3Q5VYP0 1347 aa20.21■□□□□ 0.83
HDDC2-209ENST00000609477 TOPAZ1Q8N9V7 1692 aa20.2■□□□□ 0.82
HDDC2-209ENST00000609477 PLEKHG3A1L390 1219 aa20.2■□□□□ 0.82
HDDC2-209ENST00000609477 NGDNQ8NEJ9 315 aaKnown RBP20.19■□□□□ 0.82
HDDC2-209ENST00000609477 XPCQ01831 940 aaPredicted RBP20.18■□□□□ 0.82
HDDC2-209ENST00000609477 POLR3AO14802 1390 aaPredicted RBP20.18■□□□□ 0.82
HDDC2-209ENST00000609477 TNS3Q68CZ2 1445 aa20.18■□□□□ 0.82
HDDC2-209ENST00000609477 LRP6O75581 1613 aa20.17■□□□□ 0.82
HDDC2-209ENST00000609477 ARHGEF10O15013 1369 aa20.17■□□□□ 0.82
HDDC2-209ENST00000609477 MEX3CQ5U5Q3 659 aaKnown RBP20.16■□□□□ 0.82
HDDC2-209ENST00000609477 PUS7Q96PZ0 661 aaKnown RBP20.16■□□□□ 0.82
HDDC2-209ENST00000609477 CABP2Q9NPB3 220 aa20.16■□□□□ 0.82
HDDC2-209ENST00000609477 BRD4O60885 1362 aaPredicted RBP20.15■□□□□ 0.82
HDDC2-209ENST00000609477 PPIP5K1Q6PFW1 1433 aa20.14■□□□□ 0.81
HDDC2-209ENST00000609477 ATAD2Q6PL18 1390 aa20.14■□□□□ 0.81
HDDC2-209ENST00000609477 NUTM2BA6NNL0 878 aaPredicted RBP20.14■□□□□ 0.81
HDDC2-209ENST00000609477 NUTM2EB1AL46 878 aaPredicted RBP20.14■□□□□ 0.81
HDDC2-209ENST00000609477 NUTM2AQ8IVF1 878 aaPredicted RBP20.14■□□□□ 0.81
HDDC2-209ENST00000609477 TRPM3Q9HCF6 1732 aaPredicted RBP20.13■□□□□ 0.81
HDDC2-209ENST00000609477 ACEP12821 1306 aa20.13■□□□□ 0.81
HDDC2-209ENST00000609477 ST20-MTHFSA0A0A6YYL1 179 aa20.12■□□□□ 0.81
HDDC2-209ENST00000609477 ZNF772Q68DY9 489 aaPredicted RBP20.11■□□□□ 0.81
HDDC2-209ENST00000609477 RGS17Q9UGC6 210 aaPredicted RBP20.11■□□□□ 0.81
HDDC2-209ENST00000609477 USP47Q96K76 1375 aa20.1■□□□□ 0.81
HDDC2-209ENST00000609477 ALS2Q96Q42 1657 aa20.1■□□□□ 0.81
HDDC2-209ENST00000609477 TESK2Q96S53 571 aa20.1■□□□□ 0.81
HDDC2-209ENST00000609477 CABP1Q9NZU7 370 aa20.1■□□□□ 0.81
HDDC2-209ENST00000609477 ZNF692Q9BU19 519 aaPredicted RBP20.09■□□□□ 0.81
HDDC2-209ENST00000609477 LMOD2Q6P5Q4 547 aa20.07■□□□□ 0.8
HDDC2-209ENST00000609477 MARF1Q9Y4F3 1742 aaKnown RBP20.07■□□□□ 0.8
HDDC2-209ENST00000609477 PAK3O75914 559 aaPredicted RBP20.06■□□□□ 0.8
HDDC2-209ENST00000609477 ADAMTS2O95450 1211 aa20.05■□□□□ 0.8
HDDC2-209ENST00000609477 NGLY1Q96IV0 654 aa20.05■□□□□ 0.8
HDDC2-209ENST00000609477 C8orf37Q96NL8 207 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms