RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 PCDHGC3Q9UN70 934 aa10.28□□□□□ -0.76
HDDC2-207ENST00000608532 USB1Q9BQ65 265 aaKnown RBP10.27□□□□□ -0.77
HDDC2-207ENST00000608532 RGS20O76081 388 aa10.26□□□□□ -0.77
HDDC2-207ENST00000608532 CSPP1Q1MSJ5 1256 aa10.26□□□□□ -0.77
HDDC2-207ENST00000608532 PRKD2Q9BZL6 878 aa10.26□□□□□ -0.77
HDDC2-207ENST00000608532 FAM117AQ9C073 453 aa10.26□□□□□ -0.77
HDDC2-207ENST00000608532 MYSM1Q5VVJ2 828 aa10.25□□□□□ -0.77
HDDC2-207ENST00000608532 RSBN1LQ6PCB5 846 aaPredicted RBP10.25□□□□□ -0.77
HDDC2-207ENST00000608532 RIC3Q7Z5B4 369 aa10.25□□□□□ -0.77
HDDC2-207ENST00000608532 ATP1B4Q9UN42 357 aaPredicted RBP10.25□□□□□ -0.77
HDDC2-207ENST00000608532 MSS51Q4VC12 460 aa10.24□□□□□ -0.77
HDDC2-207ENST00000608532 PCDHB15Q9Y5E8 787 aa10.24□□□□□ -0.77
HDDC2-207ENST00000608532 SPTLC1O15269 473 aa10.23□□□□□ -0.77
HDDC2-207ENST00000608532 ANKLE1Q8NAG6 615 aa10.23□□□□□ -0.77
HDDC2-207ENST00000608532 DDRGK1Q96HY6 314 aa10.23□□□□□ -0.77
HDDC2-207ENST00000608532 POLR3EQ9NVU0 708 aa10.23□□□□□ -0.77
HDDC2-207ENST00000608532 FCF1Q9Y324 198 aaKnown RBP10.23□□□□□ -0.77
HDDC2-207ENST00000608532 BRPF1P55201 1214 aaPredicted RBP10.22□□□□□ -0.77
HDDC2-207ENST00000608532 RETREG3Q86VR2 466 aa10.22□□□□□ -0.77
HDDC2-207ENST00000608532 RSPH6AQ9H0K4 717 aa10.22□□□□□ -0.77
HDDC2-207ENST00000608532 MTMR2Q13614 643 aa10.21□□□□□ -0.77
HDDC2-207ENST00000608532 LIMD1Q9UGP4 676 aa10.21□□□□□ -0.77
HDDC2-207ENST00000608532 CABLES1Q8TDN4 633 aa10.2□□□□□ -0.78
HDDC2-207ENST00000608532 SLC19A1P41440 591 aa10.19□□□□□ -0.78
HDDC2-207ENST00000608532 CLK2P49760 499 aaKnown RBP10.19□□□□□ -0.78
HDDC2-207ENST00000608532 IL27Q8NEV9 243 aa10.19□□□□□ -0.78
HDDC2-207ENST00000608532 PLEKHG3A1L390 1219 aa10.18□□□□□ -0.78
HDDC2-207ENST00000608532 NUTM2BA6NNL0 878 aaPredicted RBP10.18□□□□□ -0.78
HDDC2-207ENST00000608532 NUTM2EB1AL46 878 aaPredicted RBP10.18□□□□□ -0.78
HDDC2-207ENST00000608532 GJA5P36382 358 aa10.18□□□□□ -0.78
HDDC2-207ENST00000608532 PLA2G2CQ5R387 149 aa10.18□□□□□ -0.78
HDDC2-207ENST00000608532 NUTM2DQ5VT03 806 aaPredicted RBP10.18□□□□□ -0.78
HDDC2-207ENST00000608532 NUTM2AQ8IVF1 878 aaPredicted RBP10.18□□□□□ -0.78
HDDC2-207ENST00000608532 CCDC24Q8N4L8 307 aa10.18□□□□□ -0.78
HDDC2-207ENST00000608532 PRR7Q8TB68 274 aa10.18□□□□□ -0.78
HDDC2-207ENST00000608532 ZBTB3Q9H5J0 574 aa10.18□□□□□ -0.78
HDDC2-207ENST00000608532 DXOO77932 396 aaKnown RBP10.17□□□□□ -0.78
HDDC2-207ENST00000608532 JUNDP17535 347 aa10.17□□□□□ -0.78
HDDC2-207ENST00000608532 HRCP23327 699 aa10.17□□□□□ -0.78
HDDC2-207ENST00000608532 MMP16P51512 607 aa10.17□□□□□ -0.78
HDDC2-207ENST00000608532 LIAT1Q6ZQX7 453 aa10.17□□□□□ -0.78
HDDC2-207ENST00000608532 V9GY48 417 aaPredicted RBP10.17□□□□□ -0.78
HDDC2-207ENST00000608532 SPDYE5A6NIY4 337 aa10.16□□□□□ -0.78
HDDC2-207ENST00000608532 TSC1Q92574 1164 aa10.16□□□□□ -0.78
HDDC2-207ENST00000608532 QPCTQ16769 361 aa10.15□□□□□ -0.78
HDDC2-207ENST00000608532 EMID1Q96A84 441 aaPredicted RBP10.15□□□□□ -0.78
HDDC2-207ENST00000608532 SKIV2LQ15477 1246 aaKnown RBP10.14□□□□□ -0.79
HDDC2-207ENST00000608532 SH3D19Q5HYK7 790 aa10.14□□□□□ -0.79
HDDC2-207ENST00000608532 ZBTB24O43167 697 aaPredicted RBP10.13□□□□□ -0.79
HDDC2-207ENST00000608532 PRPF38BQ5VTL8 546 aaKnown RBP10.13□□□□□ -0.79
HDDC2-207ENST00000608532 PROCA1Q8NCQ7 364 aaPredicted RBP10.13□□□□□ -0.79
HDDC2-207ENST00000608532 CFAP99D6REC4 459 aa10.12□□□□□ -0.79
HDDC2-207ENST00000608532 SPRYD7Q5W111 196 aa10.12□□□□□ -0.79
HDDC2-207ENST00000608532 NUDT12Q9BQG2 462 aa10.12□□□□□ -0.79
HDDC2-207ENST00000608532 IRX2Q9BZI1 471 aaPredicted RBP10.12□□□□□ -0.79
HDDC2-207ENST00000608532 LILRB3O75022 631 aa10.11□□□□□ -0.79
HDDC2-207ENST00000608532 TUSC1Q2TAM9 212 aa10.1□□□□□ -0.79
HDDC2-207ENST00000608532 RTL5Q5HYW3 569 aaPredicted RBP10.1□□□□□ -0.79
HDDC2-207ENST00000608532 ZNF697Q5TEC3 545 aa10.1□□□□□ -0.79
HDDC2-207ENST00000608532 CD2BP2O95400 341 aaKnown RBP10.08□□□□□ -0.8
HDDC2-207ENST00000608532 CCNYL3P0C7X3 344 aa10.08□□□□□ -0.8
HDDC2-207ENST00000608532 RPIAP49247 311 aa10.08□□□□□ -0.8
HDDC2-207ENST00000608532 ZNF598Q86UK7 904 aaKnown RBP10.08□□□□□ -0.8
HDDC2-207ENST00000608532 PTPRNQ16849 979 aa10.07□□□□□ -0.8
HDDC2-207ENST00000608532 PCMTD1Q96MG8 357 aaPredicted RBP10.07□□□□□ -0.8
HDDC2-207ENST00000608532 GFRA3O60609 400 aa10.06□□□□□ -0.8
HDDC2-207ENST00000608532 CTHP32929 405 aa10.06□□□□□ -0.8
HDDC2-207ENST00000608532 FOXC1Q12948 553 aa10.06□□□□□ -0.8
HDDC2-207ENST00000608532 DESI1Q6ICB0 168 aa10.06□□□□□ -0.8
HDDC2-207ENST00000608532 TRIM32Q13049 653 aa10.05□□□□□ -0.8
HDDC2-207ENST00000608532 PTCRAQ6ISU1 281 aaPredicted RBP10.05□□□□□ -0.8
HDDC2-207ENST00000608532 LYPD8Q6UX82 237 aa10.05□□□□□ -0.8
HDDC2-207ENST00000608532 HELBQ8NG08 1087 aaPredicted RBP10.05□□□□□ -0.8
HDDC2-207ENST00000608532 PDZRN3Q9UPQ7 1066 aa10.05□□□□□ -0.8
HDDC2-207ENST00000608532 TNFRSF10AO00220 468 aa10.04□□□□□ -0.8
HDDC2-207ENST00000608532 PER1O15534 1290 aaPredicted RBP10.04□□□□□ -0.8
HDDC2-207ENST00000608532 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
HDDC2-207ENST00000608532 FBXO31Q5XUX0 539 aaPredicted RBP10.03□□□□□ -0.8
HDDC2-207ENST00000608532 EVA1BQ9NVM1 165 aa10.03□□□□□ -0.8
HDDC2-207ENST00000608532 KCNH2Q12809 1159 aa10.02□□□□□ -0.81
HDDC2-207ENST00000608532 GOPCQ9HD26 462 aa10.01□□□□□ -0.81
HDDC2-207ENST00000608532 AP1G2O75843 785 aa10□□□□□ -0.81
HDDC2-207ENST00000608532 CTDSPL2Q05D32 466 aa10□□□□□ -0.81
HDDC2-207ENST00000608532 LINC01559Q495D7 138 aa10□□□□□ -0.81
HDDC2-207ENST00000608532 TRIM67Q6ZTA4 783 aa10□□□□□ -0.81
HDDC2-207ENST00000608532 UNC93B1Q9H1C4 597 aa10□□□□□ -0.81
HDDC2-207ENST00000608532 MAP10Q9P2G4 905 aa10□□□□□ -0.81
HDDC2-207ENST00000608532 GDF9O60383 454 aa9.98□□□□□ -0.81
HDDC2-207ENST00000608532 LAPTM4AQ15012 233 aa9.98□□□□□ -0.81
HDDC2-207ENST00000608532 PPP2R2DQ66LE6 453 aa9.98□□□□□ -0.81
HDDC2-207ENST00000608532 PKD2L1Q9P0L9 805 aa9.98□□□□□ -0.81
HDDC2-207ENST00000608532 NRG2O14511 850 aaPredicted RBP9.97□□□□□ -0.81
HDDC2-207ENST00000608532 RFC5P40937 340 aa9.97□□□□□ -0.81
HDDC2-207ENST00000608532 Q6ZNB5 142 aa9.97□□□□□ -0.81
HDDC2-207ENST00000608532 BAP1Q92560 729 aa9.97□□□□□ -0.81
HDDC2-207ENST00000608532 F12P00748 615 aaPredicted RBP9.96□□□□□ -0.82
HDDC2-207ENST00000608532 SKOR1P84550 965 aa9.96□□□□□ -0.82
HDDC2-207ENST00000608532 LRRN4Q8WUT4 740 aa9.96□□□□□ -0.82
HDDC2-207ENST00000608532 RC3H1Q5TC82 1133 aaKnown RBP9.95□□□□□ -0.82
HDDC2-207ENST00000608532 WNT7AO00755 349 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms