RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 WAPLQ7Z5K2 1190 aa34.4■■■■□ 3.1
SSX2IP-209ENST00000603677 NHSL1Q5SYE7 1610 aa34.39■■■■□ 3.1
SSX2IP-209ENST00000603677 KIAA1210Q9ULL0 1709 aa34.37■■■■□ 3.09
SSX2IP-209ENST00000603677 SPATA31A6Q5VVP1 1343 aa34.35■■■■□ 3.09
SSX2IP-209ENST00000603677 LRRC59Q96AG4 307 aaKnown RBP34.33■■■■□ 3.09
SSX2IP-209ENST00000603677 PLEKHH1Q9ULM0 1364 aa34.32■■■■□ 3.08
SSX2IP-209ENST00000603677 SHPRHQ149N8 1683 aa34.31■■■■□ 3.08
SSX2IP-209ENST00000603677 PHF23Q9BUL5 403 aaPredicted RBP34.31■■■■□ 3.08
SSX2IP-209ENST00000603677 PRAM1Q96QH2 718 aa34.3■■■■□ 3.08
SSX2IP-209ENST00000603677 POGKQ9P215 609 aa34.3■■■■□ 3.08
SSX2IP-209ENST00000603677 ORAI2Q96SN7 254 aa34.26■■■■□ 3.08
SSX2IP-209ENST00000603677 FMN2Q9NZ56 1722 aa34.26■■■■□ 3.07
SSX2IP-209ENST00000603677 SOS2Q07890 1332 aaPredicted RBP34.25■■■■□ 3.07
SSX2IP-209ENST00000603677 TRAK1Q9UPV9 953 aa34.24■■■■□ 3.07
SSX2IP-209ENST00000603677 NPHP3Q7Z494 1330 aa34.24■■■■□ 3.07
SSX2IP-209ENST00000603677 ADGRB2O60241 1585 aa34.23■■■■□ 3.07
SSX2IP-209ENST00000603677 ESCO1Q5FWF5 840 aa34.23■■■■□ 3.07
SSX2IP-209ENST00000603677 EIF3AQ14152 1382 aaKnown RBP34.22■■■■□ 3.07
SSX2IP-209ENST00000603677 L3MBTL2Q969R5 705 aa34.21■■■■□ 3.07
SSX2IP-209ENST00000603677 SIN3AQ96ST3 1273 aa34.19■■■■□ 3.06
SSX2IP-209ENST00000603677 ANKARQ7Z5J8 1434 aa34.18■■■■□ 3.06
SSX2IP-209ENST00000603677 KIF1AQ12756 1690 aa34.18■■■■□ 3.06
SSX2IP-209ENST00000603677 ILDR2Q71H61 639 aa34.16■■■■□ 3.06
SSX2IP-209ENST00000603677 ARHGEF28Q8N1W1 1705 aaKnown RBP34.14■■■■□ 3.06
SSX2IP-209ENST00000603677 NEUROD1Q13562 356 aa34.13■■■■□ 3.05
SSX2IP-209ENST00000603677 SAFB2Q14151 953 aaKnown RBP eCLIP34.12■■■■□ 3.05
SSX2IP-209ENST00000603677 PNPLA6Q8IY17 1366 aa34.11■■■■□ 3.05
SSX2IP-209ENST00000603677 DDX17Q92841 729 aaKnown RBP34.1■■■■□ 3.05
SSX2IP-209ENST00000603677 WASLO00401 505 aaPredicted RBP34.08■■■■□ 3.05
SSX2IP-209ENST00000603677 FOXO3O43524 673 aa34.08■■■■□ 3.05
SSX2IP-209ENST00000603677 PXDNQ92626 1479 aa34.07■■■■□ 3.05
SSX2IP-209ENST00000603677 NUTM2FA1L443 756 aa34.07■■■■□ 3.04
SSX2IP-209ENST00000603677 PHF8Q9UPP1 1060 aa34.07■■■■□ 3.04
SSX2IP-209ENST00000603677 NBPF1Q3BBV0 1214 aa34.06■■■■□ 3.04
SSX2IP-209ENST00000603677 RGS17Q9UGC6 210 aaPredicted RBP34.06■■■■□ 3.04
SSX2IP-209ENST00000603677 LRP6O75581 1613 aa34.05■■■■□ 3.04
SSX2IP-209ENST00000603677 MINK1Q8N4C8 1332 aaPredicted RBP34.04■■■■□ 3.04
SSX2IP-209ENST00000603677 MEX3CQ5U5Q3 659 aaKnown RBP34.04■■■■□ 3.04
SSX2IP-209ENST00000603677 TULP4Q9NRJ4 1543 aa34.04■■■■□ 3.04
SSX2IP-209ENST00000603677 RGPD8O14715 1765 aaPredicted RBP34.03■■■■□ 3.04
SSX2IP-209ENST00000603677 PSME1Q06323 249 aa34.03■■■■□ 3.04
SSX2IP-209ENST00000603677 COL22A1Q8NFW1 1626 aaPredicted RBP34.03■■■■□ 3.04
SSX2IP-209ENST00000603677 TRPM1Q7Z4N2 1603 aa34.02■■■■□ 3.04
SSX2IP-209ENST00000603677 SOCS7O14512 581 aa34.02■■■■□ 3.04
SSX2IP-209ENST00000603677 ZNF772Q68DY9 489 aaPredicted RBP34■■■■□ 3.03
SSX2IP-209ENST00000603677 TONSLQ96HA7 1378 aa33.99■■■■□ 3.03
SSX2IP-209ENST00000603677 HIRIP3Q9BW71 556 aaPredicted RBP33.99■■■■□ 3.03
SSX2IP-209ENST00000603677 USP32Q8NFA0 1604 aa33.99■■■■□ 3.03
SSX2IP-209ENST00000603677 KRT28Q7Z3Y7 464 aa33.97■■■■□ 3.03
SSX2IP-209ENST00000603677 NUTM2BA6NNL0 878 aaPredicted RBP33.96■■■■□ 3.03
SSX2IP-209ENST00000603677 NUTM2EB1AL46 878 aaPredicted RBP33.96■■■■□ 3.03
SSX2IP-209ENST00000603677 NUTM2AQ8IVF1 878 aaPredicted RBP33.96■■■■□ 3.03
SSX2IP-209ENST00000603677 CENPJQ9HC77 1338 aaPredicted RBP33.96■■■■□ 3.03
SSX2IP-209ENST00000603677 SPATA31A3Q5VYP0 1347 aa33.95■■■■□ 3.03
SSX2IP-209ENST00000603677 CLSPNQ9HAW4 1339 aa33.95■■■■□ 3.03
SSX2IP-209ENST00000603677 SBNO1A3KN83 1393 aa33.95■■■■□ 3.02
SSX2IP-209ENST00000603677 ROCK2O75116 1388 aaKnown RBP33.94■■■■□ 3.02
SSX2IP-209ENST00000603677 ITSN1Q15811 1721 aa33.93■■■■□ 3.02
SSX2IP-209ENST00000603677 GPRASP1Q5JY77 1395 aa33.93■■■■□ 3.02
SSX2IP-209ENST00000603677 PRR36Q9H6K5 1346 aa33.9■■■■□ 3.02
SSX2IP-209ENST00000603677 CDK19Q9BWU1 502 aa33.9■■■■□ 3.02
SSX2IP-209ENST00000603677 NUDT16Q96DE0 195 aaKnown RBP33.89■■■■□ 3.02
SSX2IP-209ENST00000603677 POTEAQ6S8J7 498 aa33.88■■■■□ 3.01
SSX2IP-209ENST00000603677 ATP7BP35670 1465 aa33.88■■■■□ 3.01
SSX2IP-209ENST00000603677 TNS3Q68CZ2 1445 aa33.87■■■■□ 3.01
SSX2IP-209ENST00000603677 ARHGEF10O15013 1369 aa33.87■■■■□ 3.01
SSX2IP-209ENST00000603677 XPCQ01831 940 aaPredicted RBP33.87■■■■□ 3.01
SSX2IP-209ENST00000603677 CCDC61Q9Y6R9 512 aa33.87■■■■□ 3.01
SSX2IP-209ENST00000603677 TIMELESSQ9UNS1 1208 aa33.86■■■■□ 3.01
SSX2IP-209ENST00000603677 PMFBP1Q8TBY8 1022 aa33.85■■■■□ 3.01
SSX2IP-209ENST00000603677 NBPF8Q3BBV2 869 aa33.84■■■■□ 3.01
SSX2IP-209ENST00000603677 QRICH2Q9H0J4 1663 aa33.83■■■■□ 3.01
SSX2IP-209ENST00000603677 NGDNQ8NEJ9 315 aaKnown RBP33.82■■■■□ 3
SSX2IP-209ENST00000603677 AFF2P51816 1311 aa33.81■■■■□ 3
SSX2IP-209ENST00000603677 PLEKHG3A1L390 1219 aa33.81■■■■□ 3
SSX2IP-209ENST00000603677 RALGAPBQ86X10 1494 aa33.81■■■■□ 3
SSX2IP-209ENST00000603677 NGLY1Q96IV0 654 aa33.8■■■■□ 3
SSX2IP-209ENST00000603677 C8orf37Q96NL8 207 aa33.8■■■■□ 3
SSX2IP-209ENST00000603677 POLR3AO14802 1390 aaPredicted RBP33.79■■■■□ 3
SSX2IP-209ENST00000603677 TOPAZ1Q8N9V7 1692 aa33.78■■■■□ 3
SSX2IP-209ENST00000603677 ADAMTS2O95450 1211 aa33.78■■■■□ 3
SSX2IP-209ENST00000603677 FNBP4Q8N3X1 1017 aaPredicted RBP33.78■■■■□ 3
SSX2IP-209ENST00000603677 MARF1Q9Y4F3 1742 aaKnown RBP33.78■■■■□ 3
SSX2IP-209ENST00000603677 EVC2Q86UK5 1308 aa33.78■■■■□ 3
SSX2IP-209ENST00000603677 SBNO2Q9Y2G9 1366 aa33.77■■■■□ 3
SSX2IP-209ENST00000603677 PCGF6Q9BYE7 350 aa33.77■■■■□ 3
SSX2IP-209ENST00000603677 TRPM3Q9HCF6 1732 aaPredicted RBP33.76■■■■□ 3
SSX2IP-209ENST00000603677 SRPK2P78362 688 aaKnown RBP33.76■■■□□ 2.99
SSX2IP-209ENST00000603677 CARD11Q9BXL7 1154 aa33.76■■■□□ 2.99
SSX2IP-209ENST00000603677 BRD4O60885 1362 aaPredicted RBP33.73■■■□□ 2.99
SSX2IP-209ENST00000603677 CDK12Q9NYV4 1490 aaPredicted RBP33.73■■■□□ 2.99
SSX2IP-209ENST00000603677 SLC24A1O60721 1099 aa33.72■■■□□ 2.99
SSX2IP-209ENST00000603677 RXRBP28702 533 aa33.72■■■□□ 2.99
SSX2IP-209ENST00000603677 ALS2Q96Q42 1657 aa33.71■■■□□ 2.99
SSX2IP-209ENST00000603677 ACEP12821 1306 aa33.69■■■□□ 2.98
SSX2IP-209ENST00000603677 QTRT2Q9H974 415 aaKnown RBP33.68■■■□□ 2.98
SSX2IP-209ENST00000603677 USP21Q9UK80 565 aa33.68■■■□□ 2.98
SSX2IP-209ENST00000603677 HAP1P54257 671 aaPredicted RBP33.67■■■□□ 2.98
SSX2IP-209ENST00000603677 RBM6P78332 1123 aaKnown RBP33.67■■■□□ 2.98
SSX2IP-209ENST00000603677 LMOD2Q6P5Q4 547 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms