RNA–Protein interactions for RNA: ENST00000599310.5

SMIM7-217, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,123 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-217ENST00000599310 C1orf167Q5SNV9 1468 aa23.87■■□□□ 1.41
SMIM7-217ENST00000599310 CDC42BPGQ6DT37 1551 aa23.87■■□□□ 1.41
SMIM7-217ENST00000599310 LRP6O75581 1613 aa23.87■■□□□ 1.41
SMIM7-217ENST00000599310 WAPLQ7Z5K2 1190 aa23.86■■□□□ 1.41
SMIM7-217ENST00000599310 SHPRHQ149N8 1683 aa23.86■■□□□ 1.41
SMIM7-217ENST00000599310 SPATA31A6Q5VVP1 1343 aa23.85■■□□□ 1.41
SMIM7-217ENST00000599310 LRRC59Q96AG4 307 aaKnown RBP23.83■■□□□ 1.41
SMIM7-217ENST00000599310 NHSL1Q5SYE7 1610 aa23.83■■□□□ 1.41
SMIM7-217ENST00000599310 POGKQ9P215 609 aa23.81■■□□□ 1.4
SMIM7-217ENST00000599310 DLC1Q96QB1 1528 aa23.79■■□□□ 1.4
SMIM7-217ENST00000599310 PLEKHH1Q9ULM0 1364 aa23.79■■□□□ 1.4
SMIM7-217ENST00000599310 ESCO1Q5FWF5 840 aa23.78■■□□□ 1.4
SMIM7-217ENST00000599310 PRAM1Q96QH2 718 aa23.78■■□□□ 1.4
SMIM7-217ENST00000599310 ORAI2Q96SN7 254 aa23.78■■□□□ 1.4
SMIM7-217ENST00000599310 TRIM26Q12899 539 aaPredicted RBP23.77■■□□□ 1.4
SMIM7-217ENST00000599310 MEX3CQ5U5Q3 659 aaKnown RBP23.77■■□□□ 1.4
SMIM7-217ENST00000599310 ADGRB1O14514 1584 aa23.76■■□□□ 1.39
SMIM7-217ENST00000599310 NPHP3Q7Z494 1330 aa23.75■■□□□ 1.39
SMIM7-217ENST00000599310 TRAK1Q9UPV9 953 aa23.74■■□□□ 1.39
SMIM7-217ENST00000599310 DDX17Q92841 729 aaKnown RBP23.73■■□□□ 1.39
SMIM7-217ENST00000599310 SAFB2Q14151 953 aaKnown RBP eCLIP23.72■■□□□ 1.39
SMIM7-217ENST00000599310 SOS2Q07890 1332 aaPredicted RBP23.72■■□□□ 1.39
SMIM7-217ENST00000599310 FMN2Q9NZ56 1722 aa23.72■■□□□ 1.39
SMIM7-217ENST00000599310 NUTM2FA1L443 756 aa23.71■■□□□ 1.39
SMIM7-217ENST00000599310 NUTM2BA6NNL0 878 aaPredicted RBP23.7■■□□□ 1.38
SMIM7-217ENST00000599310 NUTM2EB1AL46 878 aaPredicted RBP23.7■■□□□ 1.38
SMIM7-217ENST00000599310 NUTM2AQ8IVF1 878 aaPredicted RBP23.7■■□□□ 1.38
SMIM7-217ENST00000599310 EIF3AQ14152 1382 aaKnown RBP23.69■■□□□ 1.38
SMIM7-217ENST00000599310 PNPLA6Q8IY17 1366 aa23.68■■□□□ 1.38
SMIM7-217ENST00000599310 KIAA1210Q9ULL0 1709 aa23.68■■□□□ 1.38
SMIM7-217ENST00000599310 KIF1AQ12756 1690 aa23.67■■□□□ 1.38
SMIM7-217ENST00000599310 ADGRB2O60241 1585 aa23.66■■□□□ 1.38
SMIM7-217ENST00000599310 FOXO3O43524 673 aa23.66■■□□□ 1.38
SMIM7-217ENST00000599310 ZNF772Q68DY9 489 aaPredicted RBP23.65■■□□□ 1.38
SMIM7-217ENST00000599310 ANKARQ7Z5J8 1434 aa23.65■■□□□ 1.38
SMIM7-217ENST00000599310 NEUROD1Q13562 356 aa23.64■■□□□ 1.37
SMIM7-217ENST00000599310 L3MBTL2Q969R5 705 aa23.63■■□□□ 1.37
SMIM7-217ENST00000599310 PHF8Q9UPP1 1060 aa23.63■■□□□ 1.37
SMIM7-217ENST00000599310 MINK1Q8N4C8 1332 aaPredicted RBP23.62■■□□□ 1.37
SMIM7-217ENST00000599310 SIN3AQ96ST3 1273 aa23.62■■□□□ 1.37
SMIM7-217ENST00000599310 PSME1Q06323 249 aa23.61■■□□□ 1.37
SMIM7-217ENST00000599310 PXDNQ92626 1479 aa23.61■■□□□ 1.37
SMIM7-217ENST00000599310 HIRIP3Q9BW71 556 aaPredicted RBP23.6■■□□□ 1.37
SMIM7-217ENST00000599310 ARHGEF28Q8N1W1 1705 aaKnown RBP23.59■■□□□ 1.37
SMIM7-217ENST00000599310 WASLO00401 505 aaPredicted RBP23.59■■□□□ 1.37
SMIM7-217ENST00000599310 XPCQ01831 940 aaPredicted RBP23.58■■□□□ 1.37
SMIM7-217ENST00000599310 KRT28Q7Z3Y7 464 aa23.58■■□□□ 1.37
SMIM7-217ENST00000599310 COL22A1Q8NFW1 1626 aaPredicted RBP23.56■■□□□ 1.36
SMIM7-217ENST00000599310 TULP4Q9NRJ4 1543 aa23.56■■□□□ 1.36
SMIM7-217ENST00000599310 NBPF1Q3BBV0 1214 aa23.55■■□□□ 1.36
SMIM7-217ENST00000599310 C8orf37Q96NL8 207 aa23.55■■□□□ 1.36
SMIM7-217ENST00000599310 AFF2P51816 1311 aa23.55■■□□□ 1.36
SMIM7-217ENST00000599310 ADAMTS2O95450 1211 aa23.54■■□□□ 1.36
SMIM7-217ENST00000599310 SPATA31A3Q5VYP0 1347 aa23.54■■□□□ 1.36
SMIM7-217ENST00000599310 RGPD8O14715 1765 aaPredicted RBP23.53■■□□□ 1.36
SMIM7-217ENST00000599310 NGLY1Q96IV0 654 aa23.53■■□□□ 1.36
SMIM7-217ENST00000599310 CDK12Q9NYV4 1490 aaPredicted RBP23.53■■□□□ 1.36
SMIM7-217ENST00000599310 PMFBP1Q8TBY8 1022 aa23.52■■□□□ 1.36
SMIM7-217ENST00000599310 GPRASP1Q5JY77 1395 aa23.52■■□□□ 1.36
SMIM7-217ENST00000599310 TONSLQ96HA7 1378 aa23.52■■□□□ 1.36
SMIM7-217ENST00000599310 USP32Q8NFA0 1604 aa23.51■■□□□ 1.35
SMIM7-217ENST00000599310 CENPJQ9HC77 1338 aaPredicted RBP23.51■■□□□ 1.35
SMIM7-217ENST00000599310 SBNO1A3KN83 1393 aa23.51■■□□□ 1.35
SMIM7-217ENST00000599310 RXRBP28702 533 aa23.5■■□□□ 1.35
SMIM7-217ENST00000599310 TNS3Q68CZ2 1445 aa23.5■■□□□ 1.35
SMIM7-217ENST00000599310 NGDNQ8NEJ9 315 aaKnown RBP23.49■■□□□ 1.35
SMIM7-217ENST00000599310 ARHGEF10O15013 1369 aa23.49■■□□□ 1.35
SMIM7-217ENST00000599310 ROCK2O75116 1388 aaKnown RBP23.49■■□□□ 1.35
SMIM7-217ENST00000599310 HAP1P54257 671 aaPredicted RBP23.48■■□□□ 1.35
SMIM7-217ENST00000599310 UPF1Q92900 1129 aaKnown RBP eCLIP23.48■■□□□ 1.354e-10■■■■■ 27.4
SMIM7-217ENST00000599310 CDK19Q9BWU1 502 aa23.48■■□□□ 1.35
SMIM7-217ENST00000599310 TRPM1Q7Z4N2 1603 aa23.48■■□□□ 1.35
SMIM7-217ENST00000599310 ITSN1Q15811 1721 aa23.47■■□□□ 1.35
SMIM7-217ENST00000599310 LMOD2Q6P5Q4 547 aa23.47■■□□□ 1.35
SMIM7-217ENST00000599310 NUDT16Q96DE0 195 aaKnown RBP23.47■■□□□ 1.35
SMIM7-217ENST00000599310 PRR36Q9H6K5 1346 aa23.47■■□□□ 1.35
SMIM7-217ENST00000599310 ATP7BP35670 1465 aa23.44■■□□□ 1.34
SMIM7-217ENST00000599310 RGS12O14924 1447 aa23.44■■□□□ 1.34
SMIM7-217ENST00000599310 SRPK2P78362 688 aaKnown RBP23.43■■□□□ 1.34
SMIM7-217ENST00000599310 QTRT2Q9H974 415 aaKnown RBP23.43■■□□□ 1.34
SMIM7-217ENST00000599310 USP21Q9UK80 565 aa23.43■■□□□ 1.34
SMIM7-217ENST00000599310 CCDC61Q9Y6R9 512 aa23.43■■□□□ 1.34
SMIM7-217ENST00000599310 FNBP4Q8N3X1 1017 aaPredicted RBP23.42■■□□□ 1.34
SMIM7-217ENST00000599310 MARF1Q9Y4F3 1742 aaKnown RBP23.4■■□□□ 1.34
SMIM7-217ENST00000599310 RBM6P78332 1123 aaKnown RBP23.4■■□□□ 1.34
SMIM7-217ENST00000599310 TRPC5Q9UL62 973 aaPredicted RBP23.4■■□□□ 1.34
SMIM7-217ENST00000599310 QRICH2Q9H0J4 1663 aa23.4■■□□□ 1.34
SMIM7-217ENST00000599310 PAK3O75914 559 aaPredicted RBP23.38■■□□□ 1.33
SMIM7-217ENST00000599310 EVC2Q86UK5 1308 aa23.37■■□□□ 1.33
SMIM7-217ENST00000599310 NBPF8Q3BBV2 869 aa23.37■■□□□ 1.33
SMIM7-217ENST00000599310 PLEKHG3A1L390 1219 aa23.36■■□□□ 1.33
SMIM7-217ENST00000599310 CARD11Q9BXL7 1154 aa23.36■■□□□ 1.33
SMIM7-217ENST00000599310 TRPM3Q9HCF6 1732 aaPredicted RBP23.36■■□□□ 1.33
SMIM7-217ENST00000599310 POLR3AO14802 1390 aaPredicted RBP23.35■■□□□ 1.33
SMIM7-217ENST00000599310 TOPAZ1Q8N9V7 1692 aa23.35■■□□□ 1.33
SMIM7-217ENST00000599310 ACEP12821 1306 aa23.34■■□□□ 1.33
SMIM7-217ENST00000599310 PLEKHG5O94827 1062 aa23.34■■□□□ 1.33
SMIM7-217ENST00000599310 ATRNO75882 1429 aa23.33■■□□□ 1.33
SMIM7-217ENST00000599310 RALGAPBQ86X10 1494 aa23.33■■□□□ 1.33
SMIM7-217ENST00000599310 CABLES1Q8TDN4 633 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms