RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 SLAIN2Q9P270 581 aa17.31■□□□□ 0.36
ARHGEF1-216ENST00000598587 ADGRB2O60241 1585 aa17.3■□□□□ 0.36
ARHGEF1-216ENST00000598587 MST1RQ04912 1400 aa17.29■□□□□ 0.36
ARHGEF1-216ENST00000598587 POGKQ9P215 609 aa17.27■□□□□ 0.36
ARHGEF1-216ENST00000598587 NHSL1Q5SYE7 1610 aa17.27■□□□□ 0.36
ARHGEF1-216ENST00000598587 AHDC1Q5TGY3 1603 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF1-216ENST00000598587 WAPLQ7Z5K2 1190 aa17.26■□□□□ 0.35
ARHGEF1-216ENST00000598587 TRAK1Q9UPV9 953 aa17.26■□□□□ 0.35
ARHGEF1-216ENST00000598587 QRICH2Q9H0J4 1663 aa17.26■□□□□ 0.35
ARHGEF1-216ENST00000598587 CCER1Q8TC90 406 aaPredicted RBP17.25■□□□□ 0.35
ARHGEF1-216ENST00000598587 PRAM1Q96QH2 718 aa17.25■□□□□ 0.35
ARHGEF1-216ENST00000598587 KIF1AQ12756 1690 aa17.25■□□□□ 0.35
ARHGEF1-216ENST00000598587 PLEKHH1Q9ULM0 1364 aa17.25■□□□□ 0.35
ARHGEF1-216ENST00000598587 ITSN1Q15811 1721 aa17.24■□□□□ 0.35
ARHGEF1-216ENST00000598587 RGPD8O14715 1765 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF1-216ENST00000598587 ROCK2O75116 1388 aaKnown RBP17.24■□□□□ 0.35
ARHGEF1-216ENST00000598587 HSPA1LP34931 641 aa17.23■□□□□ 0.35
ARHGEF1-216ENST00000598587 C1orf167Q5SNV9 1468 aa17.23■□□□□ 0.35
ARHGEF1-216ENST00000598587 RALGAPBQ86X10 1494 aa17.23■□□□□ 0.35
ARHGEF1-216ENST00000598587 EIF3AQ14152 1382 aaKnown RBP17.22■□□□□ 0.35
ARHGEF1-216ENST00000598587 COL16A1Q07092 1604 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF1-216ENST00000598587 SAFB2Q14151 953 aaKnown RBP eCLIP17.21■□□□□ 0.35
ARHGEF1-216ENST00000598587 TIMELESSQ9UNS1 1208 aa17.21■□□□□ 0.35
ARHGEF1-216ENST00000598587 NBPF1Q3BBV0 1214 aa17.19■□□□□ 0.34
ARHGEF1-216ENST00000598587 BRINP3Q76B58 766 aa17.19■□□□□ 0.34
ARHGEF1-216ENST00000598587 SHPRHQ149N8 1683 aa17.19■□□□□ 0.34
ARHGEF1-216ENST00000598587 GPRASP1Q5JY77 1395 aa17.17■□□□□ 0.34
ARHGEF1-216ENST00000598587 TULP4Q9NRJ4 1543 aa17.17■□□□□ 0.34
ARHGEF1-216ENST00000598587 ANKARQ7Z5J8 1434 aa17.17■□□□□ 0.34
ARHGEF1-216ENST00000598587 USP32Q8NFA0 1604 aa17.17■□□□□ 0.34
ARHGEF1-216ENST00000598587 MINK1Q8N4C8 1332 aaPredicted RBP17.16■□□□□ 0.34
ARHGEF1-216ENST00000598587 CENPJQ9HC77 1338 aaPredicted RBP17.16■□□□□ 0.34
ARHGEF1-216ENST00000598587 NBPF8Q3BBV2 869 aa17.14■□□□□ 0.33
ARHGEF1-216ENST00000598587 TOPAZ1Q8N9V7 1692 aa17.13■□□□□ 0.33
ARHGEF1-216ENST00000598587 ESCO1Q5FWF5 840 aa17.13■□□□□ 0.33
ARHGEF1-216ENST00000598587 HIRIP3Q9BW71 556 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF1-216ENST00000598587 CARD11Q9BXL7 1154 aa17.13■□□□□ 0.33
ARHGEF1-216ENST00000598587 MED1Q15648 1581 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF1-216ENST00000598587 NUTM2FA1L443 756 aa17.12■□□□□ 0.33
ARHGEF1-216ENST00000598587 NPHP3Q7Z494 1330 aa17.12■□□□□ 0.33
ARHGEF1-216ENST00000598587 JCADQ9P266 1359 aa17.12■□□□□ 0.33
ARHGEF1-216ENST00000598587 WASLO00401 505 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF1-216ENST00000598587 ORAI2Q96SN7 254 aa17.11■□□□□ 0.33
ARHGEF1-216ENST00000598587 ATP7BP35670 1465 aa17.09■□□□□ 0.33
ARHGEF1-216ENST00000598587 PXDNQ92626 1479 aa17.07■□□□□ 0.32
ARHGEF1-216ENST00000598587 LRRC59Q96AG4 307 aaKnown RBP17.07■□□□□ 0.32
ARHGEF1-216ENST00000598587 COL22A1Q8NFW1 1626 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF1-216ENST00000598587 SBNO2Q9Y2G9 1366 aa17.06■□□□□ 0.32
ARHGEF1-216ENST00000598587 PHF8Q9UPP1 1060 aa17.06■□□□□ 0.32
ARHGEF1-216ENST00000598587 SOS2Q07890 1332 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF1-216ENST00000598587 SPATA31A6Q5VVP1 1343 aa17.05■□□□□ 0.32
ARHGEF1-216ENST00000598587 EVC2Q86UK5 1308 aa17.05■□□□□ 0.32
ARHGEF1-216ENST00000598587 CDK19Q9BWU1 502 aa17.05■□□□□ 0.32
ARHGEF1-216ENST00000598587 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
ARHGEF1-216ENST00000598587 FOXO3O43524 673 aa17.03■□□□□ 0.32
ARHGEF1-216ENST00000598587 DDX17Q92841 729 aaKnown RBP17.03■□□□□ 0.32
ARHGEF1-216ENST00000598587 TRPM3Q9HCF6 1732 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF1-216ENST00000598587 MARF1Q9Y4F3 1742 aaKnown RBP17.02■□□□□ 0.32
ARHGEF1-216ENST00000598587 SLC24A1O60721 1099 aa17.02■□□□□ 0.32
ARHGEF1-216ENST00000598587 PSME1Q06323 249 aa17.02■□□□□ 0.32
ARHGEF1-216ENST00000598587 NUDT16Q96DE0 195 aaKnown RBP17.02■□□□□ 0.32
ARHGEF1-216ENST00000598587 PRR36Q9H6K5 1346 aa17.01■□□□□ 0.31
ARHGEF1-216ENST00000598587 PNPLA6Q8IY17 1366 aa17.01■□□□□ 0.31
ARHGEF1-216ENST00000598587 USP47Q96K76 1375 aa17.01■□□□□ 0.31
ARHGEF1-216ENST00000598587 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
ARHGEF1-216ENST00000598587 TNS3Q68CZ2 1445 aa17■□□□□ 0.31
ARHGEF1-216ENST00000598587 PMFBP1Q8TBY8 1022 aa17■□□□□ 0.31
ARHGEF1-216ENST00000598587 ALS2Q96Q42 1657 aa17■□□□□ 0.31
ARHGEF1-216ENST00000598587 AKAP12Q02952 1782 aa17■□□□□ 0.31
ARHGEF1-216ENST00000598587 PPIP5K1Q6PFW1 1433 aa16.99■□□□□ 0.31
ARHGEF1-216ENST00000598587 KRT28Q7Z3Y7 464 aa16.99■□□□□ 0.31
ARHGEF1-216ENST00000598587 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
ARHGEF1-216ENST00000598587 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF1-216ENST00000598587 CCDC61Q9Y6R9 512 aa16.99■□□□□ 0.31
ARHGEF1-216ENST00000598587 ATAD2Q6PL18 1390 aa16.99■□□□□ 0.31
ARHGEF1-216ENST00000598587 ABCA3Q99758 1704 aa16.99■□□□□ 0.31
ARHGEF1-216ENST00000598587 SBNO1A3KN83 1393 aa16.98■□□□□ 0.31
ARHGEF1-216ENST00000598587 XPCQ01831 940 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF1-216ENST00000598587 ARHGEF10O15013 1369 aa16.97■□□□□ 0.31
ARHGEF1-216ENST00000598587 MEX3CQ5U5Q3 659 aaKnown RBP16.96■□□□□ 0.31
ARHGEF1-216ENST00000598587 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
ARHGEF1-216ENST00000598587 POLR3AO14802 1390 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF1-216ENST00000598587 LRP6O75581 1613 aa16.96■□□□□ 0.3
ARHGEF1-216ENST00000598587 SPATA31A3Q5VYP0 1347 aa16.95■□□□□ 0.3
ARHGEF1-216ENST00000598587 MON2Q7Z3U7 1717 aa16.94■□□□□ 0.3
ARHGEF1-216ENST00000598587 ST20-MTHFSA0A0A6YYL1 179 aa16.94■□□□□ 0.3
ARHGEF1-216ENST00000598587 BRD4O60885 1362 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF1-216ENST00000598587 PLEKHG3A1L390 1219 aa16.93■□□□□ 0.3
ARHGEF1-216ENST00000598587 NUTM2BA6NNL0 878 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF1-216ENST00000598587 NUTM2EB1AL46 878 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF1-216ENST00000598587 NUTM2AQ8IVF1 878 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF1-216ENST00000598587 ACEP12821 1306 aa16.93■□□□□ 0.3
ARHGEF1-216ENST00000598587 CRYBG1Q9Y4K1 1723 aa16.93■□□□□ 0.3
ARHGEF1-216ENST00000598587 NRKQ7Z2Y5 1582 aa16.91■□□□□ 0.3
ARHGEF1-216ENST00000598587 LMOD2Q6P5Q4 547 aa16.91■□□□□ 0.3
ARHGEF1-216ENST00000598587 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
ARHGEF1-216ENST00000598587 PHRF1Q9P1Y6 1649 aaKnown RBP16.91■□□□□ 0.3
ARHGEF1-216ENST00000598587 NINLQ9Y2I6 1382 aa16.9■□□□□ 0.3
ARHGEF1-216ENST00000598587 PAK3O75914 559 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF1-216ENST00000598587 TMF1P82094 1093 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms