RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 QRICH2Q9H0J4 1663 aa31.98■■■□□ 2.71
R3HDM4-205ENST00000589445 PLEKHH1Q9ULM0 1364 aa31.96■■■□□ 2.71
R3HDM4-205ENST00000589445 FAM135BQ49AJ0 1406 aa31.96■■■□□ 2.71
R3HDM4-205ENST00000589445 ADGRL3Q9HAR2 1447 aa31.96■■■□□ 2.71
R3HDM4-205ENST00000589445 MSH6P52701 1360 aa31.95■■■□□ 2.71
R3HDM4-205ENST00000589445 GPRASP1Q5JY77 1395 aa31.94■■■□□ 2.7
R3HDM4-205ENST00000589445 SAFB2Q14151 953 aaKnown RBP eCLIP31.92■■■□□ 2.7
R3HDM4-205ENST00000589445 PRAM1Q96QH2 718 aa31.92■■■□□ 2.7
R3HDM4-205ENST00000589445 NCOA3Q9Y6Q9 1424 aa31.92■■■□□ 2.7
R3HDM4-205ENST00000589445 WAPLQ7Z5K2 1190 aa31.91■■■□□ 2.7
R3HDM4-205ENST00000589445 CARD11Q9BXL7 1154 aa31.91■■■□□ 2.7
R3HDM4-205ENST00000589445 POGKQ9P215 609 aa31.91■■■□□ 2.7
R3HDM4-205ENST00000589445 CDC42BPGQ6DT37 1551 aa31.9■■■□□ 2.7
R3HDM4-205ENST00000589445 EIF3AQ14152 1382 aaKnown RBP31.88■■■□□ 2.69
R3HDM4-205ENST00000589445 ADGRB2O60241 1585 aa31.87■■■□□ 2.69
R3HDM4-205ENST00000589445 DCCP43146 1447 aa31.84■■■□□ 2.69
R3HDM4-205ENST00000589445 FMN2Q9NZ56 1722 aa31.84■■■□□ 2.69
R3HDM4-205ENST00000589445 SIRT1Q96EB6 747 aa31.82■■■□□ 2.68
R3HDM4-205ENST00000589445 MINK1Q8N4C8 1332 aaPredicted RBP31.8■■■□□ 2.68
R3HDM4-205ENST00000589445 CENPJQ9HC77 1338 aaPredicted RBP31.8■■■□□ 2.68
R3HDM4-205ENST00000589445 ATF3P18847 181 aa31.79■■■□□ 2.68
R3HDM4-205ENST00000589445 C19orf44Q9H6X5 657 aa31.79■■■□□ 2.68
R3HDM4-205ENST00000589445 USP47Q96K76 1375 aa31.77■■■□□ 2.68
R3HDM4-205ENST00000589445 HIRIP3Q9BW71 556 aaPredicted RBP31.76■■■□□ 2.67
R3HDM4-205ENST00000589445 ROBO1Q9Y6N7 1651 aa31.74■■■□□ 2.67
R3HDM4-205ENST00000589445 CADPS2Q86UW7 1296 aa31.74■■■□□ 2.67
R3HDM4-205ENST00000589445 RGPD8O14715 1765 aaPredicted RBP31.73■■■□□ 2.67
R3HDM4-205ENST00000589445 MST1RQ04912 1400 aa31.72■■■□□ 2.67
R3HDM4-205ENST00000589445 TULP4Q9NRJ4 1543 aa31.7■■■□□ 2.66
R3HDM4-205ENST00000589445 ITSN1Q15811 1721 aa31.69■■■□□ 2.66
R3HDM4-205ENST00000589445 USP32Q8NFA0 1604 aa31.68■■■□□ 2.66
R3HDM4-205ENST00000589445 NUTM2FA1L443 756 aa31.66■■■□□ 2.66
R3HDM4-205ENST00000589445 C1orf167Q5SNV9 1468 aa31.65■■■□□ 2.66
R3HDM4-205ENST00000589445 SLAIN2Q9P270 581 aa31.63■■■□□ 2.65
R3HDM4-205ENST00000589445 KIF1AQ12756 1690 aa31.62■■■□□ 2.65
R3HDM4-205ENST00000589445 TOPAZ1Q8N9V7 1692 aa31.62■■■□□ 2.65
R3HDM4-205ENST00000589445 SBNO2Q9Y2G9 1366 aa31.61■■■□□ 2.65
R3HDM4-205ENST00000589445 ST20-MTHFSA0A0A6YYL1 179 aa31.6■■■□□ 2.65
R3HDM4-205ENST00000589445 WASLO00401 505 aaPredicted RBP31.6■■■□□ 2.65
R3HDM4-205ENST00000589445 ANKARQ7Z5J8 1434 aa31.59■■■□□ 2.65
R3HDM4-205ENST00000589445 ATP7BP35670 1465 aa31.59■■■□□ 2.65
R3HDM4-205ENST00000589445 PHLPP1O60346 1717 aa31.57■■■□□ 2.64
R3HDM4-205ENST00000589445 NHSL1Q5SYE7 1610 aa31.57■■■□□ 2.64
R3HDM4-205ENST00000589445 EVC2Q86UK5 1308 aa31.56■■■□□ 2.64
R3HDM4-205ENST00000589445 SRPK2P78362 688 aaKnown RBP31.56■■■□□ 2.64
R3HDM4-205ENST00000589445 ZEB1P37275 1124 aaPredicted RBP31.55■■■□□ 2.64
R3HDM4-205ENST00000589445 EIF4G2P78344 907 aaKnown RBP eCLIP31.55■■■□□ 2.64
R3HDM4-205ENST00000589445 CDK19Q9BWU1 502 aa31.54■■■□□ 2.64
R3HDM4-205ENST00000589445 HSPA5P11021 654 aaKnown RBP31.51■■■□□ 2.63
R3HDM4-205ENST00000589445 BRINP3Q76B58 766 aa31.51■■■□□ 2.63
R3HDM4-205ENST00000589445 RGS17Q9UGC6 210 aaPredicted RBP31.51■■■□□ 2.63
R3HDM4-205ENST00000589445 PRR36Q9H6K5 1346 aa31.5■■■□□ 2.63
R3HDM4-205ENST00000589445 AHDC1Q5TGY3 1603 aaPredicted RBP31.5■■■□□ 2.63
R3HDM4-205ENST00000589445 ESCO1Q5FWF5 840 aa31.5■■■□□ 2.63
R3HDM4-205ENST00000589445 ORAI2Q96SN7 254 aa31.5■■■□□ 2.63
R3HDM4-205ENST00000589445 CABP2Q9NPB3 220 aa31.5■■■□□ 2.63
R3HDM4-205ENST00000589445 TESK2Q96S53 571 aa31.49■■■□□ 2.63
R3HDM4-205ENST00000589445 NUDT16Q96DE0 195 aaKnown RBP31.45■■■□□ 2.63
R3HDM4-205ENST00000589445 PPIP5K1Q6PFW1 1433 aa31.44■■■□□ 2.62
R3HDM4-205ENST00000589445 COL16A1Q07092 1604 aaPredicted RBP31.44■■■□□ 2.62
R3HDM4-205ENST00000589445 TMF1P82094 1093 aa31.42■■■□□ 2.62
R3HDM4-205ENST00000589445 PHF8Q9UPP1 1060 aa31.42■■■□□ 2.62
R3HDM4-205ENST00000589445 ATAD2Q6PL18 1390 aa31.42■■■□□ 2.62
R3HDM4-205ENST00000589445 PMFBP1Q8TBY8 1022 aa31.4■■■□□ 2.62
R3HDM4-205ENST00000589445 DDX17Q92841 729 aaKnown RBP31.4■■■□□ 2.62
R3HDM4-205ENST00000589445 MYOM1P52179 1685 aa31.38■■■□□ 2.61
R3HDM4-205ENST00000589445 SLC24A1O60721 1099 aa31.38■■■□□ 2.61
R3HDM4-205ENST00000589445 AKAP12Q02952 1782 aa31.38■■■□□ 2.61
R3HDM4-205ENST00000589445 CCDC61Q9Y6R9 512 aa31.36■■■□□ 2.61
R3HDM4-205ENST00000589445 PXDNQ92626 1479 aa31.35■■■□□ 2.61
R3HDM4-205ENST00000589445 NPHP3Q7Z494 1330 aa31.35■■■□□ 2.61
R3HDM4-205ENST00000589445 FOXO3O43524 673 aa31.34■■■□□ 2.61
R3HDM4-205ENST00000589445 XPCQ01831 940 aaPredicted RBP31.34■■■□□ 2.61
R3HDM4-205ENST00000589445 TRPM3Q9HCF6 1732 aaPredicted RBP31.33■■■□□ 2.61
R3HDM4-205ENST00000589445 NGDNQ8NEJ9 315 aaKnown RBP31.33■■■□□ 2.61
R3HDM4-205ENST00000589445 POLR3GLQ9BT43 218 aa31.33■■■□□ 2.61
R3HDM4-205ENST00000589445 MON2Q7Z3U7 1717 aa31.32■■■□□ 2.6
R3HDM4-205ENST00000589445 CDCA8Q53HL2 280 aa31.3■■■□□ 2.6
R3HDM4-205ENST00000589445 POTEAQ6S8J7 498 aa31.3■■■□□ 2.6
R3HDM4-205ENST00000589445 TMC1Q8TDI8 760 aa31.3■■■□□ 2.6
R3HDM4-205ENST00000589445 CABP1Q9NZU7 370 aa31.28■■■□□ 2.6
R3HDM4-205ENST00000589445 SHPRHQ149N8 1683 aa31.28■■■□□ 2.6
R3HDM4-205ENST00000589445 POLR3AO14802 1390 aaPredicted RBP31.27■■■□□ 2.6
R3HDM4-205ENST00000589445 ACEP12821 1306 aa31.26■■■□□ 2.6
R3HDM4-205ENST00000589445 NRKQ7Z2Y5 1582 aa31.26■■■□□ 2.6
R3HDM4-205ENST00000589445 PSME1Q06323 249 aa31.25■■■□□ 2.59
R3HDM4-205ENST00000589445 PLEKHG3A1L390 1219 aa31.24■■■□□ 2.59
R3HDM4-205ENST00000589445 NINLQ9Y2I6 1382 aa31.24■■■□□ 2.59
R3HDM4-205ENST00000589445 SOS2Q07890 1332 aaPredicted RBP31.24■■■□□ 2.59
R3HDM4-205ENST00000589445 ALS2Q96Q42 1657 aa31.23■■■□□ 2.59
R3HDM4-205ENST00000589445 KRT28Q7Z3Y7 464 aa31.23■■■□□ 2.59
R3HDM4-205ENST00000589445 PUS7Q96PZ0 661 aaKnown RBP31.23■■■□□ 2.59
R3HDM4-205ENST00000589445 TNS3Q68CZ2 1445 aa31.22■■■□□ 2.59
R3HDM4-205ENST00000589445 USP6P35125 1406 aa31.2■■■□□ 2.59
R3HDM4-205ENST00000589445 CD163L1Q9NR16 1453 aa31.2■■■□□ 2.58
R3HDM4-205ENST00000589445 SLC12A5Q9H2X9 1139 aa31.18■■■□□ 2.58
R3HDM4-205ENST00000589445 A0A1W2PP64 1363 aa31.17■■■□□ 2.58
R3HDM4-205ENST00000589445 COL22A1Q8NFW1 1626 aaPredicted RBP31.17■■■□□ 2.58
R3HDM4-205ENST00000589445 PAK3O75914 559 aaPredicted RBP31.17■■■□□ 2.58
R3HDM4-205ENST00000589445 ABCA3Q99758 1704 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms