RNA–Protein interactions for RNA: ENST00000588352.5

GHDC-208, Transcript of GH3 domain containing, humanhuman

TSL 5

Gene GHDC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-208ENST00000588352 WAPLQ7Z5K2 1190 aa24.51■■□□□ 1.51
GHDC-208ENST00000588352 ADGRB2O60241 1585 aa24.5■■□□□ 1.51
GHDC-208ENST00000588352 PRAM1Q96QH2 718 aa24.5■■□□□ 1.51
GHDC-208ENST00000588352 GPRASP1Q5JY77 1395 aa24.48■■□□□ 1.51
GHDC-208ENST00000588352 RALGAPBQ86X10 1494 aa24.48■■□□□ 1.51
GHDC-208ENST00000588352 TRAK1Q9UPV9 953 aa24.48■■□□□ 1.51
GHDC-208ENST00000588352 ARHGEF28Q8N1W1 1705 aaKnown RBP24.47■■□□□ 1.51
GHDC-208ENST00000588352 C1orf167Q5SNV9 1468 aa24.47■■□□□ 1.51
GHDC-208ENST00000588352 NBPF1Q3BBV0 1214 aa24.47■■□□□ 1.51
GHDC-208ENST00000588352 HSPA1LP34931 641 aa24.46■■□□□ 1.51
GHDC-208ENST00000588352 ROCK2O75116 1388 aaKnown RBP24.45■■□□□ 1.5
GHDC-208ENST00000588352 CCER1Q8TC90 406 aaPredicted RBP24.45■■□□□ 1.5
GHDC-208ENST00000588352 POGKQ9P215 609 aa24.45■■□□□ 1.5
GHDC-208ENST00000588352 TIMELESSQ9UNS1 1208 aa24.45■■□□□ 1.5
GHDC-208ENST00000588352 AHDC1Q5TGY3 1603 aaPredicted RBP24.44■■□□□ 1.5
GHDC-208ENST00000588352 NBPF8Q3BBV2 869 aa24.43■■□□□ 1.5
GHDC-208ENST00000588352 BRINP3Q76B58 766 aa24.43■■□□□ 1.5
GHDC-208ENST00000588352 FMN2Q9NZ56 1722 aa24.41■■□□□ 1.5
GHDC-208ENST00000588352 SAFB2Q14151 953 aaKnown RBP eCLIP24.39■■□□□ 1.49
GHDC-208ENST00000588352 EIF3AQ14152 1382 aaKnown RBP24.39■■□□□ 1.49
GHDC-208ENST00000588352 ANKARQ7Z5J8 1434 aa24.38■■□□□ 1.49
GHDC-208ENST00000588352 COL16A1Q07092 1604 aaPredicted RBP24.35■■□□□ 1.49
GHDC-208ENST00000588352 NHSL1Q5SYE7 1610 aa24.35■■□□□ 1.49
GHDC-208ENST00000588352 TULP4Q9NRJ4 1543 aa24.35■■□□□ 1.49
GHDC-208ENST00000588352 CENPJQ9HC77 1338 aaPredicted RBP24.35■■□□□ 1.49
GHDC-208ENST00000588352 MINK1Q8N4C8 1332 aaPredicted RBP24.34■■□□□ 1.49
GHDC-208ENST00000588352 PHLPP1O60346 1717 aa24.32■■□□□ 1.48
GHDC-208ENST00000588352 WASLO00401 505 aaPredicted RBP24.3■■□□□ 1.48
GHDC-208ENST00000588352 ORAI2Q96SN7 254 aa24.3■■□□□ 1.48
GHDC-208ENST00000588352 HIRIP3Q9BW71 556 aaPredicted RBP24.3■■□□□ 1.48
GHDC-208ENST00000588352 CARD11Q9BXL7 1154 aa24.3■■□□□ 1.48
GHDC-208ENST00000588352 KIF1AQ12756 1690 aa24.3■■□□□ 1.48
GHDC-208ENST00000588352 SBNO2Q9Y2G9 1366 aa24.29■■□□□ 1.48
GHDC-208ENST00000588352 USP32Q8NFA0 1604 aa24.28■■□□□ 1.48
GHDC-208ENST00000588352 QRICH2Q9H0J4 1663 aa24.28■■□□□ 1.48
GHDC-208ENST00000588352 ATP7BP35670 1465 aa24.28■■□□□ 1.48
GHDC-208ENST00000588352 ESCO1Q5FWF5 840 aa24.27■■□□□ 1.48
GHDC-208ENST00000588352 JCADQ9P266 1359 aa24.27■■□□□ 1.48
GHDC-208ENST00000588352 NUTM2FA1L443 756 aa24.26■■□□□ 1.47
GHDC-208ENST00000588352 NPHP3Q7Z494 1330 aa24.26■■□□□ 1.47
GHDC-208ENST00000588352 SOS2Q07890 1332 aaPredicted RBP24.24■■□□□ 1.47
GHDC-208ENST00000588352 PRR36Q9H6K5 1346 aa24.24■■□□□ 1.47
GHDC-208ENST00000588352 PXDNQ92626 1479 aa24.23■■□□□ 1.47
GHDC-208ENST00000588352 PHF8Q9UPP1 1060 aa24.21■■□□□ 1.47
GHDC-208ENST00000588352 SHPRHQ149N8 1683 aa24.21■■□□□ 1.47
GHDC-208ENST00000588352 DDX17Q92841 729 aaKnown RBP24.2■■□□□ 1.46
GHDC-208ENST00000588352 TOPAZ1Q8N9V7 1692 aa24.19■■□□□ 1.46
GHDC-208ENST00000588352 CDK19Q9BWU1 502 aa24.19■■□□□ 1.46
GHDC-208ENST00000588352 MED1Q15648 1581 aaPredicted RBP24.19■■□□□ 1.46
GHDC-208ENST00000588352 LRRC59Q96AG4 307 aaKnown RBP24.18■■□□□ 1.46
GHDC-208ENST00000588352 EVC2Q86UK5 1308 aa24.17■■□□□ 1.46
GHDC-208ENST00000588352 FOXO3O43524 673 aa24.17■■□□□ 1.46
GHDC-208ENST00000588352 ITSN1Q15811 1721 aa24.17■■□□□ 1.46
GHDC-208ENST00000588352 USP47Q96K76 1375 aa24.16■■□□□ 1.46
GHDC-208ENST00000588352 SPATA31A6Q5VVP1 1343 aa24.16■■□□□ 1.46
GHDC-208ENST00000588352 NUDT16Q96DE0 195 aaKnown RBP24.16■■□□□ 1.46
GHDC-208ENST00000588352 PNPLA6Q8IY17 1366 aa24.16■■□□□ 1.46
GHDC-208ENST00000588352 CCDC61Q9Y6R9 512 aa24.14■■□□□ 1.45
GHDC-208ENST00000588352 SRPK2P78362 688 aaKnown RBP24.13■■□□□ 1.45
GHDC-208ENST00000588352 SBNO1A3KN83 1393 aa24.12■■□□□ 1.45
GHDC-208ENST00000588352 POLR3AO14802 1390 aaPredicted RBP24.12■■□□□ 1.45
GHDC-208ENST00000588352 RGPD8O14715 1765 aaPredicted RBP24.11■■□□□ 1.45
GHDC-208ENST00000588352 TNS3Q68CZ2 1445 aa24.1■■□□□ 1.45
GHDC-208ENST00000588352 PMFBP1Q8TBY8 1022 aa24.1■■□□□ 1.45
GHDC-208ENST00000588352 ATAD2Q6PL18 1390 aa24.1■■□□□ 1.45
GHDC-208ENST00000588352 COL22A1Q8NFW1 1626 aaPredicted RBP24.1■■□□□ 1.45
GHDC-208ENST00000588352 PPIP5K1Q6PFW1 1433 aa24.1■■□□□ 1.45
GHDC-208ENST00000588352 SLC24A1O60721 1099 aa24.09■■□□□ 1.45
GHDC-208ENST00000588352 CABP2Q9NPB3 220 aa24.09■■□□□ 1.45
GHDC-208ENST00000588352 LRP6O75581 1613 aa24.09■■□□□ 1.45
GHDC-208ENST00000588352 PLEKHG3A1L390 1219 aa24.08■■□□□ 1.45
GHDC-208ENST00000588352 XPCQ01831 940 aaPredicted RBP24.08■■□□□ 1.45
GHDC-208ENST00000588352 KRT28Q7Z3Y7 464 aa24.08■■□□□ 1.45
GHDC-208ENST00000588352 TESK2Q96S53 571 aa24.08■■□□□ 1.45
GHDC-208ENST00000588352 SPATA31A3Q5VYP0 1347 aa24.08■■□□□ 1.44
GHDC-208ENST00000588352 ST20-MTHFSA0A0A6YYL1 179 aa24.07■■□□□ 1.44
GHDC-208ENST00000588352 PSME1Q06323 249 aa24.07■■□□□ 1.44
GHDC-208ENST00000588352 NGDNQ8NEJ9 315 aaKnown RBP24.06■■□□□ 1.44
GHDC-208ENST00000588352 ARHGEF10O15013 1369 aa24.04■■□□□ 1.44
GHDC-208ENST00000588352 TRPM3Q9HCF6 1732 aaPredicted RBP24.04■■□□□ 1.44
GHDC-208ENST00000588352 PUS7Q96PZ0 661 aaKnown RBP24.04■■□□□ 1.44
GHDC-208ENST00000588352 ACEP12821 1306 aa24.03■■□□□ 1.44
GHDC-208ENST00000588352 DISP3Q9P2K9 1392 aa24.03■■□□□ 1.44
GHDC-208ENST00000588352 BRD4O60885 1362 aaPredicted RBP24.02■■□□□ 1.44
GHDC-208ENST00000588352 ALS2Q96Q42 1657 aa23.99■■□□□ 1.43
GHDC-208ENST00000588352 CABP1Q9NZU7 370 aa23.98■■□□□ 1.43
GHDC-208ENST00000588352 NINLQ9Y2I6 1382 aa23.98■■□□□ 1.43
GHDC-208ENST00000588352 USP6P35125 1406 aa23.98■■□□□ 1.43
GHDC-208ENST00000588352 CPSF1Q10570 1443 aaKnown RBP23.96■■□□□ 1.43
GHDC-208ENST00000588352 TMF1P82094 1093 aa23.96■■□□□ 1.43
GHDC-208ENST00000588352 PHF23Q9BUL5 403 aaPredicted RBP23.96■■□□□ 1.43
GHDC-208ENST00000588352 SSH2Q76I76 1423 aa23.94■■□□□ 1.42
GHDC-208ENST00000588352 NUTM2BA6NNL0 878 aaPredicted RBP23.94■■□□□ 1.42
GHDC-208ENST00000588352 NUTM2EB1AL46 878 aaPredicted RBP23.94■■□□□ 1.42
GHDC-208ENST00000588352 EIF4G2P78344 907 aaKnown RBP eCLIP23.94■■□□□ 1.42
GHDC-208ENST00000588352 NUTM2AQ8IVF1 878 aaPredicted RBP23.94■■□□□ 1.42
GHDC-208ENST00000588352 MEX3CQ5U5Q3 659 aaKnown RBP23.93■■□□□ 1.42
GHDC-208ENST00000588352 CDCA8Q53HL2 280 aa23.92■■□□□ 1.42
GHDC-208ENST00000588352 ZNF692Q9BU19 519 aaPredicted RBP23.91■■□□□ 1.42
GHDC-208ENST00000588352 CD163L1Q9NR16 1453 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms