RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 ARHGEF28Q8N1W1 1705 aaKnown RBP24.26■■□□□ 1.47
VAT1-204ENST00000587147 ADGRB2O60241 1585 aa24.25■■□□□ 1.47
VAT1-204ENST00000587147 WAPLQ7Z5K2 1190 aa24.25■■□□□ 1.47
VAT1-204ENST00000587147 PLEKHH1Q9ULM0 1364 aa24.24■■□□□ 1.47
VAT1-204ENST00000587147 PRAM1Q96QH2 718 aa24.23■■□□□ 1.47
VAT1-204ENST00000587147 AHDC1Q5TGY3 1603 aaPredicted RBP24.21■■□□□ 1.47
VAT1-204ENST00000587147 C1orf167Q5SNV9 1468 aa24.21■■□□□ 1.47
VAT1-204ENST00000587147 HSPA1LP34931 641 aa24.21■■□□□ 1.47
VAT1-204ENST00000587147 POGKQ9P215 609 aa24.21■■□□□ 1.47
VAT1-204ENST00000587147 TRAK1Q9UPV9 953 aa24.21■■□□□ 1.47
VAT1-204ENST00000587147 FMN2Q9NZ56 1722 aa24.21■■□□□ 1.47
VAT1-204ENST00000587147 GPRASP1Q5JY77 1395 aa24.2■■□□□ 1.46
VAT1-204ENST00000587147 NBPF1Q3BBV0 1214 aa24.18■■□□□ 1.46
VAT1-204ENST00000587147 BRINP3Q76B58 766 aa24.17■■□□□ 1.46
VAT1-204ENST00000587147 RALGAPBQ86X10 1494 aa24.17■■□□□ 1.46
VAT1-204ENST00000587147 ROCK2O75116 1388 aaKnown RBP24.16■■□□□ 1.46
VAT1-204ENST00000587147 EIF3AQ14152 1382 aaKnown RBP24.16■■□□□ 1.46
VAT1-204ENST00000587147 NHSL1Q5SYE7 1610 aa24.16■■□□□ 1.46
VAT1-204ENST00000587147 PHLPP1O60346 1717 aa24.15■■□□□ 1.46
VAT1-204ENST00000587147 CCER1Q8TC90 406 aaPredicted RBP24.14■■□□□ 1.45
VAT1-204ENST00000587147 ANKARQ7Z5J8 1434 aa24.13■■□□□ 1.45
VAT1-204ENST00000587147 NBPF8Q3BBV2 869 aa24.13■■□□□ 1.45
VAT1-204ENST00000587147 COL16A1Q07092 1604 aaPredicted RBP24.13■■□□□ 1.45
VAT1-204ENST00000587147 KIF1AQ12756 1690 aa24.11■■□□□ 1.45
VAT1-204ENST00000587147 SAFB2Q14151 953 aaKnown RBP eCLIP24.09■■□□□ 1.45
VAT1-204ENST00000587147 TULP4Q9NRJ4 1543 aa24.09■■□□□ 1.45
VAT1-204ENST00000587147 CENPJQ9HC77 1338 aaPredicted RBP24.09■■□□□ 1.45
VAT1-204ENST00000587147 WASLO00401 505 aaPredicted RBP24.07■■□□□ 1.44
VAT1-204ENST00000587147 QRICH2Q9H0J4 1663 aa24.06■■□□□ 1.44
VAT1-204ENST00000587147 MINK1Q8N4C8 1332 aaPredicted RBP24.06■■□□□ 1.44
VAT1-204ENST00000587147 ORAI2Q96SN7 254 aa24.05■■□□□ 1.44
VAT1-204ENST00000587147 JCADQ9P266 1359 aa24.04■■□□□ 1.44
VAT1-204ENST00000587147 SBNO2Q9Y2G9 1366 aa24.04■■□□□ 1.44
VAT1-204ENST00000587147 USP32Q8NFA0 1604 aa24.04■■□□□ 1.44
VAT1-204ENST00000587147 ESCO1Q5FWF5 840 aa24.04■■□□□ 1.44
VAT1-204ENST00000587147 NPHP3Q7Z494 1330 aa24.04■■□□□ 1.44
VAT1-204ENST00000587147 SHPRHQ149N8 1683 aa24.03■■□□□ 1.44
VAT1-204ENST00000587147 CARD11Q9BXL7 1154 aa24.03■■□□□ 1.44
VAT1-204ENST00000587147 ITSN1Q15811 1721 aa24.03■■□□□ 1.44
VAT1-204ENST00000587147 SOS2Q07890 1332 aaPredicted RBP24.02■■□□□ 1.44
VAT1-204ENST00000587147 RGPD8O14715 1765 aaPredicted RBP24.01■■□□□ 1.43
VAT1-204ENST00000587147 LRRC59Q96AG4 307 aaKnown RBP24.01■■□□□ 1.43
VAT1-204ENST00000587147 HIRIP3Q9BW71 556 aaPredicted RBP24.01■■□□□ 1.43
VAT1-204ENST00000587147 ATP7BP35670 1465 aa23.99■■□□□ 1.43
VAT1-204ENST00000587147 PXDNQ92626 1479 aa23.98■■□□□ 1.43
VAT1-204ENST00000587147 SLC24A1O60721 1099 aa23.97■■□□□ 1.43
VAT1-204ENST00000587147 SPATA31A6Q5VVP1 1343 aa23.97■■□□□ 1.43
VAT1-204ENST00000587147 PHF8Q9UPP1 1060 aa23.97■■□□□ 1.43
VAT1-204ENST00000587147 TOPAZ1Q8N9V7 1692 aa23.96■■□□□ 1.43
VAT1-204ENST00000587147 NUTM2FA1L443 756 aa23.96■■□□□ 1.43
VAT1-204ENST00000587147 CDK19Q9BWU1 502 aa23.96■■□□□ 1.43
VAT1-204ENST00000587147 MED1Q15648 1581 aaPredicted RBP23.95■■□□□ 1.43
VAT1-204ENST00000587147 EVC2Q86UK5 1308 aa23.94■■□□□ 1.42
VAT1-204ENST00000587147 PRR36Q9H6K5 1346 aa23.94■■□□□ 1.42
VAT1-204ENST00000587147 FOXO3O43524 673 aa23.93■■□□□ 1.42
VAT1-204ENST00000587147 NUDT16Q96DE0 195 aaKnown RBP23.93■■□□□ 1.42
VAT1-204ENST00000587147 CCDC61Q9Y6R9 512 aa23.92■■□□□ 1.42
VAT1-204ENST00000587147 COL22A1Q8NFW1 1626 aaPredicted RBP23.91■■□□□ 1.42
VAT1-204ENST00000587147 PSME1Q06323 249 aa23.9■■□□□ 1.42
VAT1-204ENST00000587147 DDX17Q92841 729 aaKnown RBP23.9■■□□□ 1.42
VAT1-204ENST00000587147 PNPLA6Q8IY17 1366 aa23.9■■□□□ 1.42
VAT1-204ENST00000587147 SBNO1A3KN83 1393 aa23.89■■□□□ 1.41
VAT1-204ENST00000587147 PLEKHG3A1L390 1219 aa23.88■■□□□ 1.41
VAT1-204ENST00000587147 SRPK2P78362 688 aaKnown RBP23.88■■□□□ 1.41
VAT1-204ENST00000587147 POLR3AO14802 1390 aaPredicted RBP23.88■■□□□ 1.41
VAT1-204ENST00000587147 PUS7Q96PZ0 661 aaKnown RBP23.87■■□□□ 1.41
VAT1-204ENST00000587147 KRT28Q7Z3Y7 464 aa23.86■■□□□ 1.41
VAT1-204ENST00000587147 USP47Q96K76 1375 aa23.86■■□□□ 1.41
VAT1-204ENST00000587147 ATAD2Q6PL18 1390 aa23.85■■□□□ 1.41
VAT1-204ENST00000587147 SPATA31A3Q5VYP0 1347 aa23.84■■□□□ 1.41
VAT1-204ENST00000587147 TNS3Q68CZ2 1445 aa23.84■■□□□ 1.41
VAT1-204ENST00000587147 TRPM3Q9HCF6 1732 aaPredicted RBP23.84■■□□□ 1.41
VAT1-204ENST00000587147 BRD4O60885 1362 aaPredicted RBP23.84■■□□□ 1.41
VAT1-204ENST00000587147 PMFBP1Q8TBY8 1022 aa23.84■■□□□ 1.41
VAT1-204ENST00000587147 ARHGEF10O15013 1369 aa23.83■■□□□ 1.41
VAT1-204ENST00000587147 NGDNQ8NEJ9 315 aaKnown RBP23.83■■□□□ 1.41
VAT1-204ENST00000587147 PPIP5K1Q6PFW1 1433 aa23.83■■□□□ 1.4
VAT1-204ENST00000587147 ST20-MTHFSA0A0A6YYL1 179 aa23.81■■□□□ 1.4
VAT1-204ENST00000587147 TESK2Q96S53 571 aa23.81■■□□□ 1.4
VAT1-204ENST00000587147 CABP2Q9NPB3 220 aa23.81■■□□□ 1.4
VAT1-204ENST00000587147 DISP3Q9P2K9 1392 aa23.8■■□□□ 1.4
VAT1-204ENST00000587147 LRP6O75581 1613 aa23.8■■□□□ 1.4
VAT1-204ENST00000587147 ALS2Q96Q42 1657 aa23.79■■□□□ 1.4
VAT1-204ENST00000587147 XPCQ01831 940 aaPredicted RBP23.78■■□□□ 1.4
VAT1-204ENST00000587147 ACEP12821 1306 aa23.78■■□□□ 1.4
VAT1-204ENST00000587147 NINLQ9Y2I6 1382 aa23.77■■□□□ 1.4
VAT1-204ENST00000587147 PHF23Q9BUL5 403 aaPredicted RBP23.74■■□□□ 1.39
VAT1-204ENST00000587147 CABP1Q9NZU7 370 aa23.74■■□□□ 1.39
VAT1-204ENST00000587147 TMF1P82094 1093 aa23.73■■□□□ 1.39
VAT1-204ENST00000587147 CDCA8Q53HL2 280 aa23.73■■□□□ 1.39
VAT1-204ENST00000587147 ZNF692Q9BU19 519 aaPredicted RBP23.73■■□□□ 1.39
VAT1-204ENST00000587147 AKAP12Q02952 1782 aa23.73■■□□□ 1.39
VAT1-204ENST00000587147 MARF1Q9Y4F3 1742 aaKnown RBP23.72■■□□□ 1.39
VAT1-204ENST00000587147 USP6P35125 1406 aa23.71■■□□□ 1.39
VAT1-204ENST00000587147 MEX3CQ5U5Q3 659 aaKnown RBP23.71■■□□□ 1.39
VAT1-204ENST00000587147 CPSF1Q10570 1443 aaKnown RBP23.7■■□□□ 1.38
VAT1-204ENST00000587147 EIF4G2P78344 907 aaKnown RBP eCLIP23.7■■□□□ 1.38
VAT1-204ENST00000587147 ABCA3Q99758 1704 aa23.7■■□□□ 1.38
VAT1-204ENST00000587147 NUTM2BA6NNL0 878 aaPredicted RBP23.69■■□□□ 1.38
VAT1-204ENST00000587147 NUTM2EB1AL46 878 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms