RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 RRP1P56182 461 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-231ENST00000584063 NPATQ14207 1427 aa15.19■□□□□ 0.02
CDK5RAP3-231ENST00000584063 TMEM132EQ6IEE7 984 aa15.19■□□□□ 0.02
CDK5RAP3-231ENST00000584063 PRDM15P57071 1507 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-231ENST00000584063 IDI1Q13907 227 aa15.18■□□□□ 0.02
CDK5RAP3-231ENST00000584063 GPRASP1Q5JY77 1395 aa15.18■□□□□ 0.02
CDK5RAP3-231ENST00000584063 PTPRTO14522 1441 aa15.17■□□□□ 0.02
CDK5RAP3-231ENST00000584063 NECTIN2Q92692 538 aa15.16■□□□□ 0.02
CDK5RAP3-231ENST00000584063 KCNG1Q9UIX4 513 aa15.16■□□□□ 0.02
CDK5RAP3-231ENST00000584063 TRAK1Q9UPV9 953 aa15.16■□□□□ 0.02
CDK5RAP3-231ENST00000584063 RTL5Q5HYW3 569 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-231ENST00000584063 DEPDC5O75140 1603 aa15.16■□□□□ 0.02
CDK5RAP3-231ENST00000584063 TMF1P82094 1093 aa15.15■□□□□ 0.02
CDK5RAP3-231ENST00000584063 SAFB2Q14151 953 aaKnown RBP eCLIP15.15■□□□□ 0.02
CDK5RAP3-231ENST00000584063 WWC1Q8IX03 1113 aa15.15■□□□□ 0.02
CDK5RAP3-231ENST00000584063 SLC4A3P48751 1232 aa15.15■□□□□ 0.02
CDK5RAP3-231ENST00000584063 ZNF526Q8TF50 670 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-231ENST00000584063 CLTCL1P53675 1640 aa15.14■□□□□ 0.01
CDK5RAP3-231ENST00000584063 ZBTB22O15209 634 aa15.14■□□□□ 0.01
CDK5RAP3-231ENST00000584063 TRPM2O94759 1503 aa15.14■□□□□ 0.01
CDK5RAP3-231ENST00000584063 TET3O43151 1660 aa15.14■□□□□ 0.01
CDK5RAP3-231ENST00000584063 C20orf194Q5TEA3 1177 aa15.14■□□□□ 0.01
CDK5RAP3-231ENST00000584063 TEX2Q8IWB9 1127 aa15.14■□□□□ 0.01
CDK5RAP3-231ENST00000584063 IPO4Q8TEX9 1081 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-231ENST00000584063 BBXQ8WY36 941 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-231ENST00000584063 DNAJC5Q9H3Z4 198 aa15.14■□□□□ 0.01
CDK5RAP3-231ENST00000584063 PDE4AP27815 886 aa15.13■□□□□ 0.01
CDK5RAP3-231ENST00000584063 STK26Q9P289 416 aa15.13■□□□□ 0.01
CDK5RAP3-231ENST00000584063 ADAMTS8Q9UP79 889 aa15.13■□□□□ 0.01
CDK5RAP3-231ENST00000584063 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-231ENST00000584063 NOS1P29475 1434 aa15.12■□□□□ 0.01
CDK5RAP3-231ENST00000584063 CRBNQ96SW2 442 aa15.12■□□□□ 0.01
CDK5RAP3-231ENST00000584063 EFCAB6Q5THR3 1501 aa15.12■□□□□ 0.01
CDK5RAP3-231ENST00000584063 EIF2AK4Q9P2K8 1649 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-231ENST00000584063 SPHKAPQ2M3C7 1700 aa15.12■□□□□ 0.01
CDK5RAP3-231ENST00000584063 SIGLEC1Q9BZZ2 1709 aa15.11■□□□□ 0.01
CDK5RAP3-231ENST00000584063 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-231ENST00000584063 VWDEQ8N2E2 1590 aa15.1■□□□□ 0.01
CDK5RAP3-231ENST00000584063 CERS3Q8IU89 383 aa15.1■□□□□ 0.01
CDK5RAP3-231ENST00000584063 ABCC3O15438 1527 aa15.09■□□□□ 0.01
CDK5RAP3-231ENST00000584063 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
CDK5RAP3-231ENST00000584063 NEFMP07197 916 aa15.08■□□□□ 0
CDK5RAP3-231ENST00000584063 PPP2R1AP30153 589 aa15.07■□□□□ 0
CDK5RAP3-231ENST00000584063 RNF17Q9BXT8 1623 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-231ENST00000584063 IL27Q8NEV9 243 aa15.07■□□□□ 0
CDK5RAP3-231ENST00000584063 KNSTRNQ9Y448 316 aa15.07■□□□□ 0
CDK5RAP3-231ENST00000584063 CHRM1P11229 460 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-231ENST00000584063 VGFO15240 615 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-231ENST00000584063 CEBPAP49715 358 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-231ENST00000584063 CLSTN1O94985 981 aa15.06■□□□□ 0
CDK5RAP3-231ENST00000584063 FAM43BQ6ZT52 329 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-231ENST00000584063 STAC3Q96MF2 364 aa15.06■□□□□ 0
CDK5RAP3-231ENST00000584063 SLC52A1Q9NWF4 448 aa15.06■□□□□ 0
CDK5RAP3-231ENST00000584063 MADDQ8WXG6 1647 aa15.05■□□□□ 0
CDK5RAP3-231ENST00000584063 PSMD1Q99460 953 aa15.05■□□□□ 0
CDK5RAP3-231ENST00000584063 PRDM16Q9HAZ2 1276 aa15.05■□□□□ 0
CDK5RAP3-231ENST00000584063 PLEKHH1Q9ULM0 1364 aa15.05■□□□□ -0
CDK5RAP3-231ENST00000584063 ZMYM4Q5VZL5 1548 aa15.04■□□□□ -0
CDK5RAP3-231ENST00000584063 CAMSAP1Q5T5Y3 1602 aa15.03■□□□□ -0
CDK5RAP3-231ENST00000584063 BACH2Q9BYV9 841 aa15.03■□□□□ -0
CDK5RAP3-231ENST00000584063 RNF216Q9NWF9 866 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-231ENST00000584063 LMTK2Q8IWU2 1503 aa15.02□□□□□ -0.01
CDK5RAP3-231ENST00000584063 RGS3P49796 1198 aa15.02□□□□□ -0.01
CDK5RAP3-231ENST00000584063 BLMP54132 1417 aaPredicted RBP15.02□□□□□ -0.01
CDK5RAP3-231ENST00000584063 MROH2AA6NES4 1674 aa15.01□□□□□ -0.01
CDK5RAP3-231ENST00000584063 TCERG1O14776 1098 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-231ENST00000584063 TNNT2P45379 298 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-231ENST00000584063 FTSJ3Q8IY81 847 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-231ENST00000584063 C14orf93Q9H972 538 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-231ENST00000584063 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-231ENST00000584063 SCAF11Q99590 1463 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-231ENST00000584063 LAMC1P11047 1609 aa15□□□□□ -0.01
CDK5RAP3-231ENST00000584063 WDR43Q15061 677 aaKnown RBP eCLIP15□□□□□ -0.01
CDK5RAP3-231ENST00000584063 EIF3AQ14152 1382 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-231ENST00000584063 KIF1BO60333 1816 aa15□□□□□ -0.01
CDK5RAP3-231ENST00000584063 CARD14Q9BXL6 1004 aa15□□□□□ -0.01
CDK5RAP3-231ENST00000584063 CENPJQ9HC77 1338 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-231ENST00000584063 CDCA8Q53HL2 280 aa14.99□□□□□ -0.01
CDK5RAP3-231ENST00000584063 DMRT2Q9Y5R5 561 aa14.99□□□□□ -0.01
CDK5RAP3-231ENST00000584063 GTF2E1P29083 439 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-231ENST00000584063 CLTCQ00610 1675 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-231ENST00000584063 RPGRIP1LQ68CZ1 1315 aa14.98□□□□□ -0.01
CDK5RAP3-231ENST00000584063 IQGAP1P46940 1657 aa14.98□□□□□ -0.01
CDK5RAP3-231ENST00000584063 PDE3BQ13370 1112 aa14.97□□□□□ -0.01
CDK5RAP3-231ENST00000584063 ZMYM3Q14202 1370 aa14.97□□□□□ -0.01
CDK5RAP3-231ENST00000584063 SYNMO15061 1565 aa14.97□□□□□ -0.01
CDK5RAP3-231ENST00000584063 ARHGEF40Q8TER5 1519 aa14.97□□□□□ -0.01
CDK5RAP3-231ENST00000584063 POGKQ9P215 609 aa14.97□□□□□ -0.01
CDK5RAP3-231ENST00000584063 APAF1O14727 1248 aa14.96□□□□□ -0.01
CDK5RAP3-231ENST00000584063 DUSP27Q5VZP5 1158 aa14.96□□□□□ -0.02
CDK5RAP3-231ENST00000584063 SLC12A5Q9H2X9 1139 aa14.96□□□□□ -0.02
CDK5RAP3-231ENST00000584063 PLCD4Q9BRC7 762 aa14.95□□□□□ -0.02
CDK5RAP3-231ENST00000584063 MINK1Q8N4C8 1332 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-231ENST00000584063 CABP2Q9NPB3 220 aa14.95□□□□□ -0.02
CDK5RAP3-231ENST00000584063 SRPK2P78362 688 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-231ENST00000584063 ADGRB3O60242 1522 aa14.94□□□□□ -0.02
CDK5RAP3-231ENST00000584063 ARHGAP31Q2M1Z3 1444 aa14.94□□□□□ -0.02
CDK5RAP3-231ENST00000584063 NEUROD2Q15784 382 aa14.93□□□□□ -0.02
CDK5RAP3-231ENST00000584063 PRAM1Q96QH2 718 aa14.93□□□□□ -0.02
CDK5RAP3-231ENST00000584063 MYOM1P52179 1685 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms