RNA–Protein interactions for RNA: ENST00000581850.1

LINC00473-203, long intergenic non-protein coding RNA 473, humanhuman

TSL 3 BASIC

Gene LINC00473, Length 929 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-203ENST00000581850 SIRT1Q96EB6 747 aa23.32■■□□□ 1.32
LINC00473-203ENST00000581850 FMN2Q9NZ56 1722 aa23.32■■□□□ 1.32
LINC00473-203ENST00000581850 TRAK1Q9UPV9 953 aa23.31■■□□□ 1.32
LINC00473-203ENST00000581850 ADGRB2O60241 1585 aa23.31■■□□□ 1.32
LINC00473-203ENST00000581850 ATF3P18847 181 aa23.29■■□□□ 1.32
LINC00473-203ENST00000581850 CADPS2Q86UW7 1296 aa23.29■■□□□ 1.32
LINC00473-203ENST00000581850 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
LINC00473-203ENST00000581850 PRAM1Q96QH2 718 aa23.29■■□□□ 1.32
LINC00473-203ENST00000581850 SLAIN2Q9P270 581 aa23.28■■□□□ 1.32
LINC00473-203ENST00000581850 RALGAPBQ86X10 1494 aa23.27■■□□□ 1.32
LINC00473-203ENST00000581850 RGPD8O14715 1765 aaPredicted RBP23.27■■□□□ 1.32
LINC00473-203ENST00000581850 NHSL1Q5SYE7 1610 aa23.25■■□□□ 1.31
LINC00473-203ENST00000581850 QRICH2Q9H0J4 1663 aa23.25■■□□□ 1.31
LINC00473-203ENST00000581850 C1orf167Q5SNV9 1468 aa23.24■■□□□ 1.31
LINC00473-203ENST00000581850 SAFB2Q14151 953 aaKnown RBP eCLIP23.24■■□□□ 1.31
LINC00473-203ENST00000581850 PHLPP1O60346 1717 aa23.24■■□□□ 1.31
LINC00473-203ENST00000581850 GPRASP1Q5JY77 1395 aa23.24■■□□□ 1.31
LINC00473-203ENST00000581850 USP32Q8NFA0 1604 aa23.23■■□□□ 1.31
LINC00473-203ENST00000581850 HSPA1LP34931 641 aa23.23■■□□□ 1.31
LINC00473-203ENST00000581850 ROCK2O75116 1388 aaKnown RBP23.23■■□□□ 1.31
LINC00473-203ENST00000581850 AHDC1Q5TGY3 1603 aaPredicted RBP23.22■■□□□ 1.31
LINC00473-203ENST00000581850 POGKQ9P215 609 aa23.21■■□□□ 1.31
LINC00473-203ENST00000581850 COL16A1Q07092 1604 aaPredicted RBP23.2■■□□□ 1.3
LINC00473-203ENST00000581850 SOCS7O14512 581 aa23.2■■□□□ 1.3
LINC00473-203ENST00000581850 BRINP3Q76B58 766 aa23.19■■□□□ 1.3
LINC00473-203ENST00000581850 DISP3Q9P2K9 1392 aa23.16■■□□□ 1.3
LINC00473-203ENST00000581850 MINK1Q8N4C8 1332 aaPredicted RBP23.16■■□□□ 1.3
LINC00473-203ENST00000581850 ILDR2Q71H61 639 aa23.16■■□□□ 1.3
LINC00473-203ENST00000581850 HIRIP3Q9BW71 556 aaPredicted RBP23.16■■□□□ 1.3
LINC00473-203ENST00000581850 TIMELESSQ9UNS1 1208 aa23.16■■□□□ 1.3
LINC00473-203ENST00000581850 TULP4Q9NRJ4 1543 aa23.13■■□□□ 1.29
LINC00473-203ENST00000581850 KIF1AQ12756 1690 aa23.13■■□□□ 1.29
LINC00473-203ENST00000581850 NUTM2FA1L443 756 aa23.13■■□□□ 1.29
LINC00473-203ENST00000581850 ORAI2Q96SN7 254 aa23.13■■□□□ 1.29
LINC00473-203ENST00000581850 TOPAZ1Q8N9V7 1692 aa23.12■■□□□ 1.29
LINC00473-203ENST00000581850 CENPJQ9HC77 1338 aaPredicted RBP23.11■■□□□ 1.29
LINC00473-203ENST00000581850 ITSN1Q15811 1721 aa23.11■■□□□ 1.29
LINC00473-203ENST00000581850 CARD11Q9BXL7 1154 aa23.1■■□□□ 1.29
LINC00473-203ENST00000581850 ANKARQ7Z5J8 1434 aa23.09■■□□□ 1.29
LINC00473-203ENST00000581850 DDX17Q92841 729 aaKnown RBP23.09■■□□□ 1.29
LINC00473-203ENST00000581850 ATP7BP35670 1465 aa23.09■■□□□ 1.29
LINC00473-203ENST00000581850 PRR36Q9H6K5 1346 aa23.08■■□□□ 1.29
LINC00473-203ENST00000581850 WASLO00401 505 aaPredicted RBP23.08■■□□□ 1.29
LINC00473-203ENST00000581850 SHPRHQ149N8 1683 aa23.07■■□□□ 1.28
LINC00473-203ENST00000581850 EIF3AQ14152 1382 aaKnown RBP23.07■■□□□ 1.28
LINC00473-203ENST00000581850 ESCO1Q5FWF5 840 aa23.06■■□□□ 1.28
LINC00473-203ENST00000581850 PHF23Q9BUL5 403 aaPredicted RBP23.06■■□□□ 1.28
LINC00473-203ENST00000581850 PXDNQ92626 1479 aa23.05■■□□□ 1.28
LINC00473-203ENST00000581850 CDK19Q9BWU1 502 aa23.02■■□□□ 1.28
LINC00473-203ENST00000581850 SBNO2Q9Y2G9 1366 aa23.01■■□□□ 1.27
LINC00473-203ENST00000581850 MED1Q15648 1581 aaPredicted RBP23■■□□□ 1.27
LINC00473-203ENST00000581850 SOS2Q07890 1332 aaPredicted RBP23■■□□□ 1.27
LINC00473-203ENST00000581850 TRPM3Q9HCF6 1732 aaPredicted RBP22.99■■□□□ 1.27
LINC00473-203ENST00000581850 PHF8Q9UPP1 1060 aa22.99■■□□□ 1.27
LINC00473-203ENST00000581850 FOXO3O43524 673 aa22.97■■□□□ 1.27
LINC00473-203ENST00000581850 NUDT16Q96DE0 195 aaKnown RBP22.97■■□□□ 1.27
LINC00473-203ENST00000581850 NPHP3Q7Z494 1330 aa22.97■■□□□ 1.27
LINC00473-203ENST00000581850 USP47Q96K76 1375 aa22.97■■□□□ 1.27
LINC00473-203ENST00000581850 JCADQ9P266 1359 aa22.97■■□□□ 1.27
LINC00473-203ENST00000581850 COL22A1Q8NFW1 1626 aaPredicted RBP22.96■■□□□ 1.27
LINC00473-203ENST00000581850 PMFBP1Q8TBY8 1022 aa22.95■■□□□ 1.26
LINC00473-203ENST00000581850 CABP2Q9NPB3 220 aa22.95■■□□□ 1.26
LINC00473-203ENST00000581850 XPCQ01831 940 aaPredicted RBP22.94■■□□□ 1.26
LINC00473-203ENST00000581850 PNPLA6Q8IY17 1366 aa22.93■■□□□ 1.26
LINC00473-203ENST00000581850 ST20-MTHFSA0A0A6YYL1 179 aa22.93■■□□□ 1.26
LINC00473-203ENST00000581850 ALS2Q96Q42 1657 aa22.93■■□□□ 1.26
LINC00473-203ENST00000581850 EVC2Q86UK5 1308 aa22.92■■□□□ 1.26
LINC00473-203ENST00000581850 SRPK2P78362 688 aaKnown RBP22.92■■□□□ 1.26
LINC00473-203ENST00000581850 TESK2Q96S53 571 aa22.92■■□□□ 1.26
LINC00473-203ENST00000581850 LRP6O75581 1613 aa22.92■■□□□ 1.26
LINC00473-203ENST00000581850 PPIP5K1Q6PFW1 1433 aa22.91■■□□□ 1.26
LINC00473-203ENST00000581850 LRRC59Q96AG4 307 aaKnown RBP22.91■■□□□ 1.26
LINC00473-203ENST00000581850 AKAP12Q02952 1782 aa22.91■■□□□ 1.26
LINC00473-203ENST00000581850 ABCA3Q99758 1704 aa22.89■■□□□ 1.26
LINC00473-203ENST00000581850 CCDC61Q9Y6R9 512 aa22.89■■□□□ 1.25
LINC00473-203ENST00000581850 POLR3AO14802 1390 aaPredicted RBP22.89■■□□□ 1.25
LINC00473-203ENST00000581850 KRT28Q7Z3Y7 464 aa22.88■■□□□ 1.25
LINC00473-203ENST00000581850 TNS3Q68CZ2 1445 aa22.87■■□□□ 1.25
LINC00473-203ENST00000581850 CRYBG1Q9Y4K1 1723 aa22.86■■□□□ 1.25
LINC00473-203ENST00000581850 PLEKHG3A1L390 1219 aa22.86■■□□□ 1.25
LINC00473-203ENST00000581850 ACEP12821 1306 aa22.85■■□□□ 1.25
LINC00473-203ENST00000581850 SPATA31A3Q5VYP0 1347 aa22.85■■□□□ 1.25
LINC00473-203ENST00000581850 SBNO1A3KN83 1393 aa22.85■■□□□ 1.25
LINC00473-203ENST00000581850 MARF1Q9Y4F3 1742 aaKnown RBP22.85■■□□□ 1.25
LINC00473-203ENST00000581850 SPATA31A6Q5VVP1 1343 aa22.84■■□□□ 1.25
LINC00473-203ENST00000581850 NGDNQ8NEJ9 315 aaKnown RBP22.84■■□□□ 1.25
LINC00473-203ENST00000581850 MON2Q7Z3U7 1717 aa22.84■■□□□ 1.25
LINC00473-203ENST00000581850 NRKQ7Z2Y5 1582 aa22.84■■□□□ 1.25
LINC00473-203ENST00000581850 PSME1Q06323 249 aa22.83■■□□□ 1.25
LINC00473-203ENST00000581850 ATAD2Q6PL18 1390 aa22.83■■□□□ 1.25
LINC00473-203ENST00000581850 MYOM1P52179 1685 aa22.81■■□□□ 1.24
LINC00473-203ENST00000581850 CABP1Q9NZU7 370 aa22.81■■□□□ 1.24
LINC00473-203ENST00000581850 CD163L1Q9NR16 1453 aa22.8■■□□□ 1.24
LINC00473-203ENST00000581850 HSPA5P11021 654 aaKnown RBP22.78■■□□□ 1.24
LINC00473-203ENST00000581850 PHRF1Q9P1Y6 1649 aaKnown RBP22.78■■□□□ 1.24
LINC00473-203ENST00000581850 USP6P35125 1406 aa22.77■■□□□ 1.24
LINC00473-203ENST00000581850 NUTM2BA6NNL0 878 aaPredicted RBP22.77■■□□□ 1.24
LINC00473-203ENST00000581850 NUTM2EB1AL46 878 aaPredicted RBP22.77■■□□□ 1.24
LINC00473-203ENST00000581850 NUTM2AQ8IVF1 878 aaPredicted RBP22.77■■□□□ 1.24
LINC00473-203ENST00000581850 PIK3C2AO00443 1686 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms