RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 CDC42BPGQ6DT37 1551 aa20.48■□□□□ 0.87
SUPT4H1-205ENST00000581166 PLEKHH1Q9ULM0 1364 aa20.47■□□□□ 0.87
SUPT4H1-205ENST00000581166 ADGRB1O14514 1584 aa20.44■□□□□ 0.86
SUPT4H1-205ENST00000581166 SHPRHQ149N8 1683 aa20.43■□□□□ 0.86
SUPT4H1-205ENST00000581166 ORAI2Q96SN7 254 aa20.43■□□□□ 0.86
SUPT4H1-205ENST00000581166 SPATA31A6Q5VVP1 1343 aa20.42■□□□□ 0.86
SUPT4H1-205ENST00000581166 DLC1Q96QB1 1528 aa20.42■□□□□ 0.86
SUPT4H1-205ENST00000581166 DDX17Q92841 729 aaKnown RBP20.41■□□□□ 0.86
SUPT4H1-205ENST00000581166 LRRC59Q96AG4 307 aaKnown RBP20.41■□□□□ 0.86
SUPT4H1-205ENST00000581166 PRAM1Q96QH2 718 aa20.4■□□□□ 0.86
SUPT4H1-205ENST00000581166 TRIM26Q12899 539 aaPredicted RBP20.39■□□□□ 0.85
SUPT4H1-205ENST00000581166 ESCO1Q5FWF5 840 aa20.38■□□□□ 0.85
SUPT4H1-205ENST00000581166 RGS17Q9UGC6 210 aaPredicted RBP20.38■□□□□ 0.85
SUPT4H1-205ENST00000581166 FMN2Q9NZ56 1722 aa20.38■□□□□ 0.85
SUPT4H1-205ENST00000581166 POGKQ9P215 609 aa20.37■□□□□ 0.85
SUPT4H1-205ENST00000581166 TRAK1Q9UPV9 953 aa20.37■□□□□ 0.85
SUPT4H1-205ENST00000581166 SOS2Q07890 1332 aaPredicted RBP20.36■□□□□ 0.85
SUPT4H1-205ENST00000581166 NUTM2FA1L443 756 aa20.36■□□□□ 0.85
SUPT4H1-205ENST00000581166 SOCS7O14512 581 aa20.36■□□□□ 0.85
SUPT4H1-205ENST00000581166 SAFB2Q14151 953 aaKnown RBP eCLIP20.36■□□□□ 0.85
SUPT4H1-205ENST00000581166 LRP6O75581 1613 aa20.35■□□□□ 0.85
SUPT4H1-205ENST00000581166 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
SUPT4H1-205ENST00000581166 NPHP3Q7Z494 1330 aa20.34■□□□□ 0.85
SUPT4H1-205ENST00000581166 SIN3AQ96ST3 1273 aa20.33■□□□□ 0.84
SUPT4H1-205ENST00000581166 PNPLA6Q8IY17 1366 aa20.33■□□□□ 0.84
SUPT4H1-205ENST00000581166 ADGRB2O60241 1585 aa20.32■□□□□ 0.84
SUPT4H1-205ENST00000581166 MEX3CQ5U5Q3 659 aaKnown RBP20.31■□□□□ 0.84
SUPT4H1-205ENST00000581166 NUTM2BA6NNL0 878 aaPredicted RBP20.3■□□□□ 0.84
SUPT4H1-205ENST00000581166 NUTM2EB1AL46 878 aaPredicted RBP20.3■□□□□ 0.84
SUPT4H1-205ENST00000581166 FOXO3O43524 673 aa20.3■□□□□ 0.84
SUPT4H1-205ENST00000581166 NUTM2AQ8IVF1 878 aaPredicted RBP20.3■□□□□ 0.84
SUPT4H1-205ENST00000581166 L3MBTL2Q969R5 705 aa20.3■□□□□ 0.84
SUPT4H1-205ENST00000581166 KIF1AQ12756 1690 aa20.3■□□□□ 0.84
SUPT4H1-205ENST00000581166 ARHGEF28Q8N1W1 1705 aaKnown RBP20.29■□□□□ 0.84
SUPT4H1-205ENST00000581166 PXDNQ92626 1479 aa20.29■□□□□ 0.84
SUPT4H1-205ENST00000581166 NEUROD1Q13562 356 aa20.28■□□□□ 0.84
SUPT4H1-205ENST00000581166 RGPD8O14715 1765 aaPredicted RBP20.28■□□□□ 0.84
SUPT4H1-205ENST00000581166 POTEAQ6S8J7 498 aa20.27■□□□□ 0.84
SUPT4H1-205ENST00000581166 ANKARQ7Z5J8 1434 aa20.27■□□□□ 0.84
SUPT4H1-205ENST00000581166 MINK1Q8N4C8 1332 aaPredicted RBP20.27■□□□□ 0.84
SUPT4H1-205ENST00000581166 HIRIP3Q9BW71 556 aaPredicted RBP20.27■□□□□ 0.83
SUPT4H1-205ENST00000581166 NBPF1Q3BBV0 1214 aa20.26■□□□□ 0.83
SUPT4H1-205ENST00000581166 PHF8Q9UPP1 1060 aa20.26■□□□□ 0.83
SUPT4H1-205ENST00000581166 XPCQ01831 940 aaPredicted RBP20.25■□□□□ 0.83
SUPT4H1-205ENST00000581166 EIF3AQ14152 1382 aaKnown RBP20.24■□□□□ 0.83
SUPT4H1-205ENST00000581166 USP32Q8NFA0 1604 aa20.24■□□□□ 0.83
SUPT4H1-205ENST00000581166 COL22A1Q8NFW1 1626 aaPredicted RBP20.24■□□□□ 0.83
SUPT4H1-205ENST00000581166 WASLO00401 505 aaPredicted RBP20.24■□□□□ 0.83
SUPT4H1-205ENST00000581166 ZNF772Q68DY9 489 aaPredicted RBP20.23■□□□□ 0.83
SUPT4H1-205ENST00000581166 TULP4Q9NRJ4 1543 aa20.21■□□□□ 0.83
SUPT4H1-205ENST00000581166 KRT28Q7Z3Y7 464 aa20.21■□□□□ 0.83
SUPT4H1-205ENST00000581166 PSME1Q06323 249 aa20.19■□□□□ 0.82
SUPT4H1-205ENST00000581166 AFF2P51816 1311 aa20.19■□□□□ 0.82
SUPT4H1-205ENST00000581166 SPATA31A3Q5VYP0 1347 aa20.19■□□□□ 0.82
SUPT4H1-205ENST00000581166 PRR36Q9H6K5 1346 aa20.19■□□□□ 0.82
SUPT4H1-205ENST00000581166 C8orf37Q96NL8 207 aa20.19■□□□□ 0.82
SUPT4H1-205ENST00000581166 TRPM1Q7Z4N2 1603 aa20.18■□□□□ 0.82
SUPT4H1-205ENST00000581166 ADAMTS2O95450 1211 aa20.18■□□□□ 0.82
SUPT4H1-205ENST00000581166 PMFBP1Q8TBY8 1022 aa20.18■□□□□ 0.82
SUPT4H1-205ENST00000581166 SBNO1A3KN83 1393 aa20.15■□□□□ 0.82
SUPT4H1-205ENST00000581166 TNS3Q68CZ2 1445 aa20.15■□□□□ 0.82
SUPT4H1-205ENST00000581166 CDK19Q9BWU1 502 aa20.15■□□□□ 0.82
SUPT4H1-205ENST00000581166 CENPJQ9HC77 1338 aaPredicted RBP20.15■□□□□ 0.82
SUPT4H1-205ENST00000581166 NGLY1Q96IV0 654 aa20.14■□□□□ 0.81
SUPT4H1-205ENST00000581166 ATP7BP35670 1465 aa20.14■□□□□ 0.81
SUPT4H1-205ENST00000581166 NUDT16Q96DE0 195 aaKnown RBP20.13■□□□□ 0.81
SUPT4H1-205ENST00000581166 ITSN1Q15811 1721 aa20.13■□□□□ 0.81
SUPT4H1-205ENST00000581166 ROCK2O75116 1388 aaKnown RBP20.13■□□□□ 0.81
SUPT4H1-205ENST00000581166 GPRASP1Q5JY77 1395 aa20.12■□□□□ 0.81
SUPT4H1-205ENST00000581166 TONSLQ96HA7 1378 aa20.12■□□□□ 0.81
SUPT4H1-205ENST00000581166 NBPF8Q3BBV2 869 aa20.11■□□□□ 0.81
SUPT4H1-205ENST00000581166 MARF1Q9Y4F3 1742 aaKnown RBP20.11■□□□□ 0.81
SUPT4H1-205ENST00000581166 RXRBP28702 533 aa20.1■□□□□ 0.81
SUPT4H1-205ENST00000581166 NGDNQ8NEJ9 315 aaKnown RBP20.1■□□□□ 0.81
SUPT4H1-205ENST00000581166 ARHGEF10O15013 1369 aa20.1■□□□□ 0.81
SUPT4H1-205ENST00000581166 QRICH2Q9H0J4 1663 aa20.1■□□□□ 0.81
SUPT4H1-205ENST00000581166 TRPM3Q9HCF6 1732 aaPredicted RBP20.1■□□□□ 0.81
SUPT4H1-205ENST00000581166 FNBP4Q8N3X1 1017 aaPredicted RBP20.1■□□□□ 0.81
SUPT4H1-205ENST00000581166 QTRT2Q9H974 415 aaKnown RBP20.09■□□□□ 0.81
SUPT4H1-205ENST00000581166 CCDC61Q9Y6R9 512 aa20.09■□□□□ 0.81
SUPT4H1-205ENST00000581166 LMOD2Q6P5Q4 547 aa20.08■□□□□ 0.8
SUPT4H1-205ENST00000581166 TOPAZ1Q8N9V7 1692 aa20.08■□□□□ 0.8
SUPT4H1-205ENST00000581166 USP21Q9UK80 565 aa20.08■□□□□ 0.8
SUPT4H1-205ENST00000581166 ALS2Q96Q42 1657 aa20.06■□□□□ 0.8
SUPT4H1-205ENST00000581166 CDK12Q9NYV4 1490 aaPredicted RBP20.05■□□□□ 0.8
SUPT4H1-205ENST00000581166 PLEKHG3A1L390 1219 aa20.05■□□□□ 0.8
SUPT4H1-205ENST00000581166 RBM6P78332 1123 aaKnown RBP20.05■□□□□ 0.8
SUPT4H1-205ENST00000581166 SRPK2P78362 688 aaKnown RBP20.05■□□□□ 0.8
SUPT4H1-205ENST00000581166 POLR3AO14802 1390 aaPredicted RBP20.04■□□□□ 0.8
SUPT4H1-205ENST00000581166 HAP1P54257 671 aaPredicted RBP20.04■□□□□ 0.8
SUPT4H1-205ENST00000581166 CABLES1Q8TDN4 633 aa20.04■□□□□ 0.8
SUPT4H1-205ENST00000581166 TRPC5Q9UL62 973 aaPredicted RBP20.03■□□□□ 0.8
SUPT4H1-205ENST00000581166 ABCA3Q99758 1704 aa20.03■□□□□ 0.8
SUPT4H1-205ENST00000581166 ACEP12821 1306 aa20.03■□□□□ 0.8
SUPT4H1-205ENST00000581166 CABP2Q9NPB3 220 aa20.02■□□□□ 0.8
SUPT4H1-205ENST00000581166 BCL9LQ86UU0 1499 aa20.02■□□□□ 0.8
SUPT4H1-205ENST00000581166 RALGAPBQ86X10 1494 aa20.02■□□□□ 0.8
SUPT4H1-205ENST00000581166 EVC2Q86UK5 1308 aa20.02■□□□□ 0.8
SUPT4H1-205ENST00000581166 PAK3O75914 559 aaPredicted RBP20.02■□□□□ 0.79
SUPT4H1-205ENST00000581166 CARD11Q9BXL7 1154 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms