RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 MORN1Q5T089 497 aa7.95□□□□□ -1.14
KPNB1-208ENST00000580019 KRTAP4-8Q9BYQ9 185 aa7.95□□□□□ -1.14
KPNB1-208ENST00000580019 PRDM9Q9NQV7 894 aa7.95□□□□□ -1.14
KPNB1-208ENST00000580019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.94□□□□□ -1.14
KPNB1-208ENST00000580019 IGHA1P01876 353 aa7.94□□□□□ -1.14
KPNB1-208ENST00000580019 CAPN5O15484 640 aaPredicted RBP7.91□□□□□ -1.14
KPNB1-208ENST00000580019 MSS51Q4VC12 460 aa7.91□□□□□ -1.14
KPNB1-208ENST00000580019 GPAT2Q6NUI2 795 aa7.91□□□□□ -1.14
KPNB1-208ENST00000580019 SALL2Q9Y467 1007 aaPredicted RBP7.91□□□□□ -1.14
KPNB1-208ENST00000580019 RC3H1Q5TC82 1133 aaKnown RBP7.9□□□□□ -1.14
KPNB1-208ENST00000580019 ALDH1A1P00352 501 aa7.89□□□□□ -1.15
KPNB1-208ENST00000580019 PTGDRQ13258 359 aa7.89□□□□□ -1.15
KPNB1-208ENST00000580019 FECHP22830 423 aa7.88□□□□□ -1.15
KPNB1-208ENST00000580019 ATP6V1AP38606 617 aa7.88□□□□□ -1.15
KPNB1-208ENST00000580019 BRICD5Q6PL45 260 aa7.88□□□□□ -1.15
KPNB1-208ENST00000580019 SLC27A5Q9Y2P5 690 aa7.88□□□□□ -1.15
KPNB1-208ENST00000580019 DNMT3AQ9Y6K1 912 aaPredicted RBP7.88□□□□□ -1.15
KPNB1-208ENST00000580019 FAM161AQ3B820 660 aa7.87□□□□□ -1.15
KPNB1-208ENST00000580019 WNT7BP56706 349 aa7.86□□□□□ -1.15
KPNB1-208ENST00000580019 FUT2Q10981 343 aa7.86□□□□□ -1.15
KPNB1-208ENST00000580019 ZFP42Q96MM3 310 aa7.86□□□□□ -1.15
KPNB1-208ENST00000580019 ADAMTS8Q9UP79 889 aa7.86□□□□□ -1.15
KPNB1-208ENST00000580019 FOXK2Q01167 660 aa7.85□□□□□ -1.15
KPNB1-208ENST00000580019 MMP16P51512 607 aa7.83□□□□□ -1.16
KPNB1-208ENST00000580019 SKOR1P84550 965 aa7.83□□□□□ -1.16
KPNB1-208ENST00000580019 WASF2Q9Y6W5 498 aa7.83□□□□□ -1.16
KPNB1-208ENST00000580019 RDH13Q8NBN7 331 aa7.82□□□□□ -1.16
KPNB1-208ENST00000580019 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.81□□□□□ -1.16
KPNB1-208ENST00000580019 OATP04181 439 aa7.81□□□□□ -1.16
KPNB1-208ENST00000580019 PXYLP1Q8TE99 480 aa7.81□□□□□ -1.16
KPNB1-208ENST00000580019 PSMG3-AS1Q96PY0 264 aa7.81□□□□□ -1.16
KPNB1-208ENST00000580019 RNF19BQ6ZMZ0 732 aa7.8□□□□□ -1.16
KPNB1-208ENST00000580019 KRTAP9-2Q9BYQ4 174 aa7.8□□□□□ -1.16
KPNB1-208ENST00000580019 WDR70Q9NW82 654 aa7.8□□□□□ -1.16
KPNB1-208ENST00000580019 IRS1P35568 1242 aa7.78□□□□□ -1.16
KPNB1-208ENST00000580019 SCARF1Q14162 830 aa7.78□□□□□ -1.16
KPNB1-208ENST00000580019 SIAH2O43255 324 aa7.77□□□□□ -1.17
KPNB1-208ENST00000580019 ADAM23O75077 832 aa7.77□□□□□ -1.17
KPNB1-208ENST00000580019 KANK3Q6NY19 840 aa7.77□□□□□ -1.17
KPNB1-208ENST00000580019 KRTAP9-6A0A140TA67 174 aa7.76□□□□□ -1.17
KPNB1-208ENST00000580019 SOBPA7XYQ1 873 aa7.76□□□□□ -1.17
KPNB1-208ENST00000580019 Q3C1V9 767 aa7.76□□□□□ -1.17
KPNB1-208ENST00000580019 MRPL14Q6P1L8 145 aaKnown RBP7.76□□□□□ -1.17
KPNB1-208ENST00000580019 CCDC24Q8N4L8 307 aa7.76□□□□□ -1.17
KPNB1-208ENST00000580019 DXOO77932 396 aaKnown RBP7.75□□□□□ -1.17
KPNB1-208ENST00000580019 DCAF8L2P0C7V8 631 aa7.75□□□□□ -1.17
KPNB1-208ENST00000580019 GCGRP47871 477 aa7.75□□□□□ -1.17
KPNB1-208ENST00000580019 GRIPAP1Q4V328 841 aa7.75□□□□□ -1.17
KPNB1-208ENST00000580019 EHBP1Q8NDI1 1231 aa7.75□□□□□ -1.17
KPNB1-208ENST00000580019 PURBQ96QR8 312 aaKnown RBP7.74□□□□□ -1.17
KPNB1-208ENST00000580019 DAXXQ9UER7 740 aaPredicted RBP7.74□□□□□ -1.17
KPNB1-208ENST00000580019 NUTM2FA1L443 756 aa7.73□□□□□ -1.17
KPNB1-208ENST00000580019 DDX11L8A8MPP1 907 aa7.73□□□□□ -1.17
KPNB1-208ENST00000580019 PPFIA3O75145 1194 aa7.73□□□□□ -1.17
KPNB1-208ENST00000580019 METTL3Q86U44 580 aaKnown RBP7.73□□□□□ -1.17
KPNB1-208ENST00000580019 FCHSD2O94868 740 aa7.71□□□□□ -1.18
KPNB1-208ENST00000580019 MLLT3P42568 568 aaPredicted RBP7.71□□□□□ -1.18
KPNB1-208ENST00000580019 KRT76Q01546 638 aa7.71□□□□□ -1.18
KPNB1-208ENST00000580019 KRTAP1-3Q8IUG1 177 aa7.71□□□□□ -1.18
KPNB1-208ENST00000580019 SVOPQ8N4V2 548 aa7.71□□□□□ -1.18
KPNB1-208ENST00000580019 CNTNAP3BQ96NU0 1288 aa7.71□□□□□ -1.18
KPNB1-208ENST00000580019 USB1Q9BQ65 265 aaKnown RBP7.71□□□□□ -1.18
KPNB1-208ENST00000580019 CNTNAP3Q9BZ76 1288 aa7.71□□□□□ -1.18
KPNB1-208ENST00000580019 MSTNO14793 375 aa7.69□□□□□ -1.18
KPNB1-208ENST00000580019 MAN1A2O60476 641 aa7.69□□□□□ -1.18
KPNB1-208ENST00000580019 MARSP56192 900 aaKnown RBP7.69□□□□□ -1.18
KPNB1-208ENST00000580019 ZNF385CQ66K41 422 aaPredicted RBP7.69□□□□□ -1.18
KPNB1-208ENST00000580019 SULF1Q8IWU6 871 aa7.69□□□□□ -1.18
KPNB1-208ENST00000580019 SCARF2Q96GP6 870 aaPredicted RBP7.68□□□□□ -1.18
KPNB1-208ENST00000580019 GPR161Q8N6U8 529 aaKnown RBP7.65□□□□□ -1.18
KPNB1-208ENST00000580019 ARHGEF15O94989 841 aa7.64□□□□□ -1.19
KPNB1-208ENST00000580019 TIMP2P16035 220 aa7.64□□□□□ -1.19
KPNB1-208ENST00000580019 NNTQ13423 1086 aa7.64□□□□□ -1.19
KPNB1-208ENST00000580019 Q8N3U1 123 aa7.64□□□□□ -1.19
KPNB1-208ENST00000580019 PLEKHG3A1L390 1219 aa7.63□□□□□ -1.19
KPNB1-208ENST00000580019 ADH1CP00326 375 aa7.63□□□□□ -1.19
KPNB1-208ENST00000580019 WDR4P57081 412 aaKnown RBP7.63□□□□□ -1.19
KPNB1-208ENST00000580019 COL25A1Q9BXS0 654 aaPredicted RBP7.63□□□□□ -1.19
KPNB1-208ENST00000580019 SPOCK3Q9BQ16 436 aa7.62□□□□□ -1.19
KPNB1-208ENST00000580019 PLA2G4EQ3MJ16 856 aa7.61□□□□□ -1.19
KPNB1-208ENST00000580019 WHAMMQ8TF30 809 aa7.61□□□□□ -1.19
KPNB1-208ENST00000580019 TLL2Q9Y6L7 1015 aa7.61□□□□□ -1.19
KPNB1-208ENST00000580019 SLURP2P0DP57 97 aa7.6□□□□□ -1.19
KPNB1-208ENST00000580019 SH3BP2P78314 561 aa7.6□□□□□ -1.19
KPNB1-208ENST00000580019 MPNDQ8N594 471 aa7.6□□□□□ -1.19
KPNB1-208ENST00000580019 K7ELQ4 463 aaPredicted RBP7.59□□□□□ -1.19
KPNB1-208ENST00000580019 JUNDP17535 347 aa7.59□□□□□ -1.19
KPNB1-208ENST00000580019 HIC1Q14526 733 aa7.59□□□□□ -1.19
KPNB1-208ENST00000580019 C6orf118Q5T5N4 469 aa7.59□□□□□ -1.19
KPNB1-208ENST00000580019 PTCRAQ6ISU1 281 aaPredicted RBP7.59□□□□□ -1.19
KPNB1-208ENST00000580019 GALNT6Q8NCL4 622 aa7.58□□□□□ -1.2
KPNB1-208ENST00000580019 NUDT12Q9BQG2 462 aa7.57□□□□□ -1.2
KPNB1-208ENST00000580019 KLF16Q9BXK1 252 aaPredicted RBP7.57□□□□□ -1.2
KPNB1-208ENST00000580019 RNFT1Q5M7Z0 435 aa7.56□□□□□ -1.2
KPNB1-208ENST00000580019 LCE3BQ5TA77 95 aa7.56□□□□□ -1.2
KPNB1-208ENST00000580019 NANOS1Q8WY41 292 aaKnown RBP7.56□□□□□ -1.2
KPNB1-208ENST00000580019 ARHGEF1Q92888 912 aaKnown RBP7.56□□□□□ -1.2
KPNB1-208ENST00000580019 UPP2O95045 317 aa7.55□□□□□ -1.2
KPNB1-208ENST00000580019 PROCP04070 461 aa7.55□□□□□ -1.2
KPNB1-208ENST00000580019 NLRP7Q8WX94 980 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms