RNA–Protein interactions for RNA: ENST00000577208.5

NUP85-204, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-204ENST00000577208 RAD21O60216 631 aa11.5□□□□□ -0.57
NUP85-204ENST00000577208 PRPF38BQ5VTL8 546 aaKnown RBP11.5□□□□□ -0.57
NUP85-204ENST00000577208 ARID3AQ99856 593 aa11.5□□□□□ -0.57
NUP85-204ENST00000577208 USP17L8P0C7I0 530 aa11.49□□□□□ -0.57
NUP85-204ENST00000577208 KRTAP3-3Q9BYR6 98 aa11.49□□□□□ -0.57
NUP85-204ENST00000577208 KRTAP3-2Q9BYR7 98 aa11.49□□□□□ -0.57
NUP85-204ENST00000577208 ACTN4O43707 911 aaKnown RBP11.48□□□□□ -0.57
NUP85-204ENST00000577208 MTMR14Q8NCE2 650 aa11.48□□□□□ -0.57
NUP85-204ENST00000577208 APLP1P51693 650 aa11.47□□□□□ -0.57
NUP85-204ENST00000577208 MORN1Q5T089 497 aa11.47□□□□□ -0.57
NUP85-204ENST00000577208 NECTIN2Q92692 538 aa11.47□□□□□ -0.57
NUP85-204ENST00000577208 SLC27A5Q9Y2P5 690 aa11.47□□□□□ -0.57
NUP85-204ENST00000577208 COG6Q9Y2V7 657 aa11.47□□□□□ -0.57
NUP85-204ENST00000577208 CFAP99D6REC4 459 aa11.46□□□□□ -0.57
NUP85-204ENST00000577208 CTDSPL2Q05D32 466 aa11.46□□□□□ -0.57
NUP85-204ENST00000577208 KCTD12Q96CX2 325 aaKnown RBP11.46□□□□□ -0.57
NUP85-204ENST00000577208 TSR3Q9UJK0 312 aaKnown RBP11.46□□□□□ -0.57
NUP85-204ENST00000577208 A6NJR5 290 aa11.45□□□□□ -0.58
NUP85-204ENST00000577208 APBB1O00213 710 aa11.45□□□□□ -0.58
NUP85-204ENST00000577208 PROSER2Q86WR7 435 aaPredicted RBP11.45□□□□□ -0.58
NUP85-204ENST00000577208 GDPD2Q9HCC8 539 aa11.45□□□□□ -0.58
NUP85-204ENST00000577208 TRAK2O60296 914 aa11.44□□□□□ -0.58
NUP85-204ENST00000577208 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
NUP85-204ENST00000577208 WBP1LQ9NX94 342 aa11.44□□□□□ -0.58
NUP85-204ENST00000577208 ABL2P42684 1182 aa11.43□□□□□ -0.58
NUP85-204ENST00000577208 PRR7Q8TB68 274 aa11.43□□□□□ -0.58
NUP85-204ENST00000577208 PRR14Q9BWN1 585 aa11.43□□□□□ -0.58
NUP85-204ENST00000577208 C1orf115Q9H7X2 142 aa11.43□□□□□ -0.58
NUP85-204ENST00000577208 PCDHB3Q9Y5E6 796 aa11.43□□□□□ -0.58
NUP85-204ENST00000577208 BLOC1S3Q6QNY0 202 aa11.42□□□□□ -0.58
NUP85-204ENST00000577208 RNF19BQ6ZMZ0 732 aa11.42□□□□□ -0.58
NUP85-204ENST00000577208 LRRN4Q8WUT4 740 aa11.42□□□□□ -0.58
NUP85-204ENST00000577208 ZNF777Q9ULD5 760 aaPredicted RBP11.42□□□□□ -0.58
NUP85-204ENST00000577208 HMX1Q9NP08 348 aaPredicted RBP11.41□□□□□ -0.58
NUP85-204ENST00000577208 TBC1D2BQ9UPU7 963 aa11.41□□□□□ -0.58
NUP85-204ENST00000577208 COPS2P61201 443 aa11.39□□□□□ -0.59
NUP85-204ENST00000577208 Q3C1V9 767 aa11.39□□□□□ -0.59
NUP85-204ENST00000577208 POTEGQ6S5H5 508 aa11.39□□□□□ -0.59
NUP85-204ENST00000577208 THSD4Q6ZMP0 1018 aa11.39□□□□□ -0.59
NUP85-204ENST00000577208 RETREG3Q86VR2 466 aa11.38□□□□□ -0.59
NUP85-204ENST00000577208 CDAN1Q8IWY9 1227 aa11.38□□□□□ -0.59
NUP85-204ENST00000577208 PTPN5P54829 565 aa11.37□□□□□ -0.59
NUP85-204ENST00000577208 SCUBE3Q8IX30 993 aa11.37□□□□□ -0.59
NUP85-204ENST00000577208 POTEMA6NI47 508 aa11.36□□□□□ -0.59
NUP85-204ENST00000577208 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
NUP85-204ENST00000577208 PRM3Q9NNZ6 103 aa11.36□□□□□ -0.59
NUP85-204ENST00000577208 NR1I2O75469 434 aa11.35□□□□□ -0.59
NUP85-204ENST00000577208 EPS8L1Q8TE68 723 aa11.35□□□□□ -0.59
NUP85-204ENST00000577208 GJD4Q96KN9 370 aaPredicted RBP11.35□□□□□ -0.59
NUP85-204ENST00000577208 ZNF330Q9Y3S2 320 aaPredicted RBP11.35□□□□□ -0.59
NUP85-204ENST00000577208 FNBP4Q8N3X1 1017 aaPredicted RBP11.34□□□□□ -0.59
NUP85-204ENST00000577208 USB1Q9BQ65 265 aaKnown RBP11.34□□□□□ -0.59
NUP85-204ENST00000577208 FMNL1O95466 1100 aaPredicted RBP11.33□□□□□ -0.6
NUP85-204ENST00000577208 BRICD5Q6PL45 260 aa11.33□□□□□ -0.6
NUP85-204ENST00000577208 TRIM34Q9BYJ4 488 aa11.33□□□□□ -0.6
NUP85-204ENST00000577208 NDUFB9Q9Y6M9 179 aa11.33□□□□□ -0.6
NUP85-204ENST00000577208 NR6A1Q15406 480 aa11.32□□□□□ -0.6
NUP85-204ENST00000577208 CCDC82Q8N4S0 544 aa11.32□□□□□ -0.6
NUP85-204ENST00000577208 WWC1Q8IX03 1113 aa11.31□□□□□ -0.6
NUP85-204ENST00000577208 TLL1O43897 1013 aa11.3□□□□□ -0.6
NUP85-204ENST00000577208 POM121CA8CG34 1229 aa11.29□□□□□ -0.6
NUP85-204ENST00000577208 THAP11Q96EK4 314 aa11.29□□□□□ -0.6
NUP85-204ENST00000577208 ARXQ96QS3 562 aa11.29□□□□□ -0.6
NUP85-204ENST00000577208 PRDM9Q9NQV7 894 aa11.28□□□□□ -0.6
NUP85-204ENST00000577208 HOMEZQ8IX15 550 aa11.27□□□□□ -0.61
NUP85-204ENST00000577208 SPSB2Q99619 263 aa11.27□□□□□ -0.61
NUP85-204ENST00000577208 SOCS7O14512 581 aa11.26□□□□□ -0.61
NUP85-204ENST00000577208 JUNDP17535 347 aa11.26□□□□□ -0.61
NUP85-204ENST00000577208 IRF5Q13568 498 aa11.26□□□□□ -0.61
NUP85-204ENST00000577208 MTRQ99707 1265 aa11.26□□□□□ -0.61
NUP85-204ENST00000577208 CTHP32929 405 aa11.25□□□□□ -0.61
NUP85-204ENST00000577208 VAC14Q08AM6 782 aa11.25□□□□□ -0.61
NUP85-204ENST00000577208 LYPD8Q6UX82 237 aa11.25□□□□□ -0.61
NUP85-204ENST00000577208 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
NUP85-204ENST00000577208 FAM160A2Q8N612 972 aaPredicted RBP11.24□□□□□ -0.61
NUP85-204ENST00000577208 MAP10Q9P2G4 905 aa11.24□□□□□ -0.61
NUP85-204ENST00000577208 DESI1Q6ICB0 168 aa11.23□□□□□ -0.61
NUP85-204ENST00000577208 ZNF516Q92618 1163 aa11.23□□□□□ -0.61
NUP85-204ENST00000577208 CCDC97Q96F63 343 aaPredicted RBP11.23□□□□□ -0.61
NUP85-204ENST00000577208 MYT1LQ9UL68 1186 aa11.23□□□□□ -0.61
NUP85-204ENST00000577208 GPR37L1O60883 481 aa11.22□□□□□ -0.61
NUP85-204ENST00000577208 ZPR1O75312 459 aa11.22□□□□□ -0.61
NUP85-204ENST00000577208 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
NUP85-204ENST00000577208 CALR3Q96L12 384 aaKnown RBP11.21□□□□□ -0.61
NUP85-204ENST00000577208 GLMNQ92990 594 aa11.2□□□□□ -0.62
NUP85-204ENST00000577208 PTPRNQ16849 979 aa11.19□□□□□ -0.62
NUP85-204ENST00000577208 MSS51Q4VC12 460 aa11.19□□□□□ -0.62
NUP85-204ENST00000577208 NYAP1Q6ZVC0 841 aa11.19□□□□□ -0.62
NUP85-204ENST00000577208 CCDC24Q8N4L8 307 aa11.19□□□□□ -0.62
NUP85-204ENST00000577208 ADH1BP00325 375 aa11.18□□□□□ -0.62
NUP85-204ENST00000577208 NUDT12Q9BQG2 462 aa11.18□□□□□ -0.62
NUP85-204ENST00000577208 IL21Q9HBE4 155 aa11.18□□□□□ -0.62
NUP85-204ENST00000577208 DXOO77932 396 aaKnown RBP11.17□□□□□ -0.62
NUP85-204ENST00000577208 F12P00748 615 aaPredicted RBP11.17□□□□□ -0.62
NUP85-204ENST00000577208 WASHC4Q2M389 1173 aa11.17□□□□□ -0.62
NUP85-204ENST00000577208 TJAP1Q5JTD0 557 aa11.17□□□□□ -0.62
NUP85-204ENST00000577208 NKX2-3Q8TAU0 364 aa11.17□□□□□ -0.62
NUP85-204ENST00000577208 CCNYL3P0C7X3 344 aa11.16□□□□□ -0.62
NUP85-204ENST00000577208 HDGFL1Q5TGJ6 251 aa11.16□□□□□ -0.62
NUP85-204ENST00000577208 PNMA1Q8ND90 353 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms