RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 PPLO60437 1756 aa22.85■■□□□ 1.25
USB1-215ENST00000569252 MYOM2P54296 1465 aa22.84■■□□□ 1.25
USB1-215ENST00000569252 RXRBP28702 533 aa22.83■■□□□ 1.25
USB1-215ENST00000569252 ZEB1P37275 1124 aaPredicted RBP22.83■■□□□ 1.25
USB1-215ENST00000569252 C8orf37Q96NL8 207 aa22.81■■□□□ 1.24
USB1-215ENST00000569252 C14orf93Q9H972 538 aaKnown RBP22.81■■□□□ 1.24
USB1-215ENST00000569252 CFAP70Q5T0N1 1121 aa22.8■■□□□ 1.24
USB1-215ENST00000569252 RGS12O14924 1447 aa22.79■■□□□ 1.24
USB1-215ENST00000569252 DCCP43146 1447 aa22.79■■□□□ 1.24
USB1-215ENST00000569252 IFT172Q9UG01 1749 aa22.79■■□□□ 1.24
USB1-215ENST00000569252 PNPLA6Q8IY17 1366 aa22.78■■□□□ 1.24
USB1-215ENST00000569252 ADGRL3Q9HAR2 1447 aa22.78■■□□□ 1.24
USB1-215ENST00000569252 PIK3C2GO75747 1445 aa22.77■■□□□ 1.24
USB1-215ENST00000569252 ADAMTS2O95450 1211 aa22.77■■□□□ 1.24
USB1-215ENST00000569252 PRAG1Q86YV5 1406 aa22.76■■□□□ 1.23
USB1-215ENST00000569252 NRXN1Q9ULB1 1477 aa22.75■■□□□ 1.23
USB1-215ENST00000569252 NBPF8Q3BBV2 869 aa22.74■■□□□ 1.23
USB1-215ENST00000569252 TMEM132EQ6IEE7 984 aa22.73■■□□□ 1.23
USB1-215ENST00000569252 ORAI2Q96SN7 254 aa22.73■■□□□ 1.23
USB1-215ENST00000569252 QTRT2Q9H974 415 aaKnown RBP22.72■■□□□ 1.23
USB1-215ENST00000569252 ROBO2Q9HCK4 1378 aa22.72■■□□□ 1.23
USB1-215ENST00000569252 C1orf167Q5SNV9 1468 aa22.72■■□□□ 1.23
USB1-215ENST00000569252 SRCAPQ6ZRS2 3230 aa22.71■■□□□ 1.23
USB1-215ENST00000569252 LRRC59Q96AG4 307 aaKnown RBP22.71■■□□□ 1.23
USB1-215ENST00000569252 STK26Q9P289 416 aa22.71■■□□□ 1.23
USB1-215ENST00000569252 ROCK2O75116 1388 aaKnown RBP22.7■■□□□ 1.22
USB1-215ENST00000569252 CDK12Q9NYV4 1490 aaPredicted RBP22.7■■□□□ 1.22
USB1-215ENST00000569252 NBPF1Q3BBV0 1214 aa22.68■■□□□ 1.22
USB1-215ENST00000569252 CARD11Q9BXL7 1154 aa22.68■■□□□ 1.22
USB1-215ENST00000569252 LAMC1P11047 1609 aa22.67■■□□□ 1.22
USB1-215ENST00000569252 NGLY1Q96IV0 654 aa22.66■■□□□ 1.22
USB1-215ENST00000569252 RBM6P78332 1123 aaKnown RBP22.65■■□□□ 1.22
USB1-215ENST00000569252 TRAK1Q9UPV9 953 aa22.65■■□□□ 1.22
USB1-215ENST00000569252 XPCQ01831 940 aaPredicted RBP22.63■■□□□ 1.21
USB1-215ENST00000569252 POGKQ9P215 609 aa22.63■■□□□ 1.21
USB1-215ENST00000569252 LRPPRCP42704 1394 aaKnown RBP22.63■■□□□ 1.21
USB1-215ENST00000569252 KIAA1210Q9ULL0 1709 aa22.62■■□□□ 1.21
USB1-215ENST00000569252 YTHDC2Q9H6S0 1430 aaKnown RBP22.62■■□□□ 1.21
USB1-215ENST00000569252 PTCH1Q13635 1447 aa22.61■■□□□ 1.21
USB1-215ENST00000569252 USP21Q9UK80 565 aa22.6■■□□□ 1.21
USB1-215ENST00000569252 ABCC11Q96J66 1382 aa22.6■■□□□ 1.21
USB1-215ENST00000569252 SOS2Q07890 1332 aaPredicted RBP22.59■■□□□ 1.21
USB1-215ENST00000569252 NUTM2FA1L443 756 aa22.59■■□□□ 1.21
USB1-215ENST00000569252 SIRT1Q96EB6 747 aa22.59■■□□□ 1.21
USB1-215ENST00000569252 RALGAPBQ86X10 1494 aa22.59■■□□□ 1.21
USB1-215ENST00000569252 TRPM1Q7Z4N2 1603 aa22.57■■□□□ 1.2
USB1-215ENST00000569252 EIF3AQ14152 1382 aaKnown RBP22.57■■□□□ 1.2
USB1-215ENST00000569252 EP400Q96L91 3159 aa22.56■■□□□ 1.2
USB1-215ENST00000569252 PRAM1Q96QH2 718 aa22.55■■□□□ 1.2
USB1-215ENST00000569252 GPRASP1Q5JY77 1395 aa22.54■■□□□ 1.2
USB1-215ENST00000569252 ADGRB1O14514 1584 aa22.54■■□□□ 1.2
USB1-215ENST00000569252 ESCO1Q5FWF5 840 aa22.53■■□□□ 1.2
USB1-215ENST00000569252 WAPLQ7Z5K2 1190 aa22.53■■□□□ 1.2
USB1-215ENST00000569252 COL22A1Q8NFW1 1626 aaPredicted RBP22.53■■□□□ 1.2
USB1-215ENST00000569252 ATRNO75882 1429 aa22.52■■□□□ 1.2
USB1-215ENST00000569252 SLC24A1O60721 1099 aa22.52■■□□□ 1.2
USB1-215ENST00000569252 EIF4G2P78344 907 aaKnown RBP eCLIP22.52■■□□□ 1.2
USB1-215ENST00000569252 SAFB2Q14151 953 aaKnown RBP eCLIP22.52■■□□□ 1.2
USB1-215ENST00000569252 PLEKHH1Q9ULM0 1364 aa22.51■■□□□ 1.19
USB1-215ENST00000569252 PXDNQ92626 1479 aa22.51■■□□□ 1.19
USB1-215ENST00000569252 FOXO3O43524 673 aa22.5■■□□□ 1.19
USB1-215ENST00000569252 PLEKHG5O94827 1062 aa22.5■■□□□ 1.19
USB1-215ENST00000569252 TRPC5Q9UL62 973 aaPredicted RBP22.5■■□□□ 1.19
USB1-215ENST00000569252 CENPJQ9HC77 1338 aaPredicted RBP22.5■■□□□ 1.19
USB1-215ENST00000569252 ATAD2Q6PL18 1390 aa22.5■■□□□ 1.19
USB1-215ENST00000569252 TECPR2O15040 1411 aa22.49■■□□□ 1.19
USB1-215ENST00000569252 FNBP4Q8N3X1 1017 aaPredicted RBP22.49■■□□□ 1.19
USB1-215ENST00000569252 BCL9LQ86UU0 1499 aa22.47■■□□□ 1.19
USB1-215ENST00000569252 CDC42BPGQ6DT37 1551 aa22.47■■□□□ 1.19
USB1-215ENST00000569252 USP47Q96K76 1375 aa22.47■■□□□ 1.19
USB1-215ENST00000569252 DLC1Q96QB1 1528 aa22.47■■□□□ 1.19
USB1-215ENST00000569252 MARF1Q9Y4F3 1742 aaKnown RBP22.45■■□□□ 1.19
USB1-215ENST00000569252 ST20-MTHFSA0A0A6YYL1 179 aa22.45■■□□□ 1.18
USB1-215ENST00000569252 KNDC1Q76NI1 1749 aa22.43■■□□□ 1.18
USB1-215ENST00000569252 MINK1Q8N4C8 1332 aaPredicted RBP22.43■■□□□ 1.18
USB1-215ENST00000569252 NPHP3Q7Z494 1330 aa22.42■■□□□ 1.18
USB1-215ENST00000569252 HSPA5P11021 654 aaKnown RBP22.41■■□□□ 1.18
USB1-215ENST00000569252 HIRIP3Q9BW71 556 aaPredicted RBP22.41■■□□□ 1.18
USB1-215ENST00000569252 GLI3P10071 1580 aa22.4■■□□□ 1.18
USB1-215ENST00000569252 RGPD8O14715 1765 aaPredicted RBP22.38■■□□□ 1.17
USB1-215ENST00000569252 EVC2Q86UK5 1308 aa22.38■■□□□ 1.17
USB1-215ENST00000569252 FMN2Q9NZ56 1722 aa22.38■■□□□ 1.17
USB1-215ENST00000569252 TMF1P82094 1093 aa22.38■■□□□ 1.17
USB1-215ENST00000569252 CABLES1Q8TDN4 633 aa22.38■■□□□ 1.17
USB1-215ENST00000569252 GJD4Q96KN9 370 aaPredicted RBP22.38■■□□□ 1.17
USB1-215ENST00000569252 BRWD3Q6RI45 1802 aa22.37■■□□□ 1.17
USB1-215ENST00000569252 WASLO00401 505 aaPredicted RBP22.36■■□□□ 1.17
USB1-215ENST00000569252 SRPK2P78362 688 aaKnown RBP22.36■■□□□ 1.17
USB1-215ENST00000569252 CDCA8Q53HL2 280 aa22.36■■□□□ 1.17
USB1-215ENST00000569252 ARHGEF28Q8N1W1 1705 aaKnown RBP22.36■■□□□ 1.17
USB1-215ENST00000569252 CDK19Q9BWU1 502 aa22.35■■□□□ 1.17
USB1-215ENST00000569252 DEFB132Q7Z7B7 95 aa22.34■■□□□ 1.17
USB1-215ENST00000569252 ZRANB1Q9UGI0 708 aa22.34■■□□□ 1.17
USB1-215ENST00000569252 SPATA31A3Q5VYP0 1347 aa22.32■■□□□ 1.16
USB1-215ENST00000569252 SLIT2O94813 1529 aa22.32■■□□□ 1.16
USB1-215ENST00000569252 USP32Q8NFA0 1604 aa22.32■■□□□ 1.16
USB1-215ENST00000569252 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.32■■□□□ 1.16
USB1-215ENST00000569252 SBNO2Q9Y2G9 1366 aa22.31■■□□□ 1.16
USB1-215ENST00000569252 KRT28Q7Z3Y7 464 aa22.31■■□□□ 1.16
USB1-215ENST00000569252 UNC5CLQ8IV45 518 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms