RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 TRAK1Q9UPV9 953 aa17.95■□□□□ 0.46
NSMCE1-214ENST00000569236 HSPA1LP34931 641 aa17.94■□□□□ 0.46
NSMCE1-214ENST00000569236 PRAM1Q96QH2 718 aa17.94■□□□□ 0.46
NSMCE1-214ENST00000569236 MST1RQ04912 1400 aa17.93■□□□□ 0.46
NSMCE1-214ENST00000569236 POGKQ9P215 609 aa17.93■□□□□ 0.46
NSMCE1-214ENST00000569236 NBPF1Q3BBV0 1214 aa17.92■□□□□ 0.46
NSMCE1-214ENST00000569236 CDC42BPGQ6DT37 1551 aa17.92■□□□□ 0.46
NSMCE1-214ENST00000569236 TRPM1Q7Z4N2 1603 aa17.91■□□□□ 0.46
NSMCE1-214ENST00000569236 SAFB2Q14151 953 aaKnown RBP eCLIP17.91■□□□□ 0.46
NSMCE1-214ENST00000569236 ARHGEF28Q8N1W1 1705 aaKnown RBP17.9■□□□□ 0.46
NSMCE1-214ENST00000569236 C1orf167Q5SNV9 1468 aa17.88■□□□□ 0.45
NSMCE1-214ENST00000569236 NBPF8Q3BBV2 869 aa17.87■□□□□ 0.45
NSMCE1-214ENST00000569236 BRINP3Q76B58 766 aa17.87■□□□□ 0.45
NSMCE1-214ENST00000569236 ROCK2O75116 1388 aaKnown RBP17.87■□□□□ 0.45
NSMCE1-214ENST00000569236 PHLPP1O60346 1717 aa17.86■□□□□ 0.45
NSMCE1-214ENST00000569236 FMN2Q9NZ56 1722 aa17.85■□□□□ 0.45
NSMCE1-214ENST00000569236 ADGRB2O60241 1585 aa17.85■□□□□ 0.45
NSMCE1-214ENST00000569236 SLC24A1O60721 1099 aa17.84■□□□□ 0.45
NSMCE1-214ENST00000569236 MINK1Q8N4C8 1332 aaPredicted RBP17.83■□□□□ 0.45
NSMCE1-214ENST00000569236 AHDC1Q5TGY3 1603 aaPredicted RBP17.83■□□□□ 0.45
NSMCE1-214ENST00000569236 NUTM2FA1L443 756 aa17.83■□□□□ 0.44
NSMCE1-214ENST00000569236 HIRIP3Q9BW71 556 aaPredicted RBP17.83■□□□□ 0.44
NSMCE1-214ENST00000569236 TIMELESSQ9UNS1 1208 aa17.83■□□□□ 0.44
NSMCE1-214ENST00000569236 ORAI2Q96SN7 254 aa17.82■□□□□ 0.44
NSMCE1-214ENST00000569236 NHSL1Q5SYE7 1610 aa17.82■□□□□ 0.44
NSMCE1-214ENST00000569236 RALGAPBQ86X10 1494 aa17.81■□□□□ 0.44
NSMCE1-214ENST00000569236 ESCO1Q5FWF5 840 aa17.81■□□□□ 0.44
NSMCE1-214ENST00000569236 COL16A1Q07092 1604 aaPredicted RBP17.8■□□□□ 0.44
NSMCE1-214ENST00000569236 GPRASP1Q5JY77 1395 aa17.8■□□□□ 0.44
NSMCE1-214ENST00000569236 CENPJQ9HC77 1338 aaPredicted RBP17.8■□□□□ 0.44
NSMCE1-214ENST00000569236 CARD11Q9BXL7 1154 aa17.79■□□□□ 0.44
NSMCE1-214ENST00000569236 EIF3AQ14152 1382 aaKnown RBP17.78■□□□□ 0.44
NSMCE1-214ENST00000569236 RGPD8O14715 1765 aaPredicted RBP17.78■□□□□ 0.44
NSMCE1-214ENST00000569236 WASLO00401 505 aaPredicted RBP17.78■□□□□ 0.44
NSMCE1-214ENST00000569236 QRICH2Q9H0J4 1663 aa17.78■□□□□ 0.44
NSMCE1-214ENST00000569236 ANKARQ7Z5J8 1434 aa17.76■□□□□ 0.43
NSMCE1-214ENST00000569236 DDX17Q92841 729 aaKnown RBP17.76■□□□□ 0.43
NSMCE1-214ENST00000569236 KIF1AQ12756 1690 aa17.76■□□□□ 0.43
NSMCE1-214ENST00000569236 TULP4Q9NRJ4 1543 aa17.76■□□□□ 0.43
NSMCE1-214ENST00000569236 USP32Q8NFA0 1604 aa17.75■□□□□ 0.43
NSMCE1-214ENST00000569236 JCADQ9P266 1359 aa17.74■□□□□ 0.43
NSMCE1-214ENST00000569236 NPHP3Q7Z494 1330 aa17.74■□□□□ 0.43
NSMCE1-214ENST00000569236 FOXO3O43524 673 aa17.73■□□□□ 0.43
NSMCE1-214ENST00000569236 LRRC59Q96AG4 307 aaKnown RBP17.73■□□□□ 0.43
NSMCE1-214ENST00000569236 CDK19Q9BWU1 502 aa17.73■□□□□ 0.43
NSMCE1-214ENST00000569236 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
NSMCE1-214ENST00000569236 SOS2Q07890 1332 aaPredicted RBP17.72■□□□□ 0.43
NSMCE1-214ENST00000569236 PRR36Q9H6K5 1346 aa17.71■□□□□ 0.43
NSMCE1-214ENST00000569236 ITSN1Q15811 1721 aa17.71■□□□□ 0.43
NSMCE1-214ENST00000569236 SHPRHQ149N8 1683 aa17.7■□□□□ 0.42
NSMCE1-214ENST00000569236 ATP7BP35670 1465 aa17.7■□□□□ 0.42
NSMCE1-214ENST00000569236 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
NSMCE1-214ENST00000569236 SRPK2P78362 688 aaKnown RBP17.69■□□□□ 0.42
NSMCE1-214ENST00000569236 NUDT16Q96DE0 195 aaKnown RBP17.69■□□□□ 0.42
NSMCE1-214ENST00000569236 PXDNQ92626 1479 aa17.69■□□□□ 0.42
NSMCE1-214ENST00000569236 XPCQ01831 940 aaPredicted RBP17.68■□□□□ 0.42
NSMCE1-214ENST00000569236 PMFBP1Q8TBY8 1022 aa17.68■□□□□ 0.42
NSMCE1-214ENST00000569236 EVC2Q86UK5 1308 aa17.67■□□□□ 0.42
NSMCE1-214ENST00000569236 SPATA31A6Q5VVP1 1343 aa17.67■□□□□ 0.42
NSMCE1-214ENST00000569236 SBNO2Q9Y2G9 1366 aa17.66■□□□□ 0.42
NSMCE1-214ENST00000569236 CABP2Q9NPB3 220 aa17.66■□□□□ 0.42
NSMCE1-214ENST00000569236 TOPAZ1Q8N9V7 1692 aa17.66■□□□□ 0.42
NSMCE1-214ENST00000569236 PSME1Q06323 249 aa17.66■□□□□ 0.42
NSMCE1-214ENST00000569236 CCDC61Q9Y6R9 512 aa17.66■□□□□ 0.42
NSMCE1-214ENST00000569236 PNPLA6Q8IY17 1366 aa17.65■□□□□ 0.42
NSMCE1-214ENST00000569236 DISP3Q9P2K9 1392 aa17.65■□□□□ 0.42
NSMCE1-214ENST00000569236 KRT28Q7Z3Y7 464 aa17.65■□□□□ 0.42
NSMCE1-214ENST00000569236 NGDNQ8NEJ9 315 aaKnown RBP17.64■□□□□ 0.41
NSMCE1-214ENST00000569236 ZNF316A6NFI3 1004 aaPredicted RBP17.63■□□□□ 0.41
NSMCE1-214ENST00000569236 USP47Q96K76 1375 aa17.63■□□□□ 0.41
NSMCE1-214ENST00000569236 ST20-MTHFSA0A0A6YYL1 179 aa17.62■□□□□ 0.41
NSMCE1-214ENST00000569236 PPIP5K1Q6PFW1 1433 aa17.62■□□□□ 0.41
NSMCE1-214ENST00000569236 PHF23Q9BUL5 403 aaPredicted RBP17.61■□□□□ 0.41
NSMCE1-214ENST00000569236 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
NSMCE1-214ENST00000569236 NUTM2BA6NNL0 878 aaPredicted RBP17.61■□□□□ 0.41
NSMCE1-214ENST00000569236 NUTM2EB1AL46 878 aaPredicted RBP17.61■□□□□ 0.41
NSMCE1-214ENST00000569236 NUTM2AQ8IVF1 878 aaPredicted RBP17.61■□□□□ 0.41
NSMCE1-214ENST00000569236 SPATA31A3Q5VYP0 1347 aa17.61■□□□□ 0.41
NSMCE1-214ENST00000569236 SBNO1A3KN83 1393 aa17.6■□□□□ 0.41
NSMCE1-214ENST00000569236 LRP6O75581 1613 aa17.6■□□□□ 0.41
NSMCE1-214ENST00000569236 PLEKHG3A1L390 1219 aa17.6■□□□□ 0.41
NSMCE1-214ENST00000569236 TNS3Q68CZ2 1445 aa17.6■□□□□ 0.41
NSMCE1-214ENST00000569236 ACEP12821 1306 aa17.59■□□□□ 0.41
NSMCE1-214ENST00000569236 POLR3AO14802 1390 aaPredicted RBP17.59■□□□□ 0.41
NSMCE1-214ENST00000569236 MEX3CQ5U5Q3 659 aaKnown RBP17.58■□□□□ 0.41
NSMCE1-214ENST00000569236 TRPM3Q9HCF6 1732 aaPredicted RBP17.58■□□□□ 0.41
NSMCE1-214ENST00000569236 ATAD2Q6PL18 1390 aa17.58■□□□□ 0.4
NSMCE1-214ENST00000569236 TESK2Q96S53 571 aa17.58■□□□□ 0.4
NSMCE1-214ENST00000569236 CABP1Q9NZU7 370 aa17.58■□□□□ 0.4
NSMCE1-214ENST00000569236 LMOD2Q6P5Q4 547 aa17.57■□□□□ 0.4
NSMCE1-214ENST00000569236 ARHGEF10O15013 1369 aa17.56■□□□□ 0.4
NSMCE1-214ENST00000569236 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
NSMCE1-214ENST00000569236 DIEXFQ68CQ4 756 aaKnown RBP17.54■□□□□ 0.4
NSMCE1-214ENST00000569236 ALS2Q96Q42 1657 aa17.54■□□□□ 0.4
NSMCE1-214ENST00000569236 ADAMTS2O95450 1211 aa17.53■□□□□ 0.4
NSMCE1-214ENST00000569236 TMF1P82094 1093 aa17.53■□□□□ 0.4
NSMCE1-214ENST00000569236 PUS7Q96PZ0 661 aaKnown RBP17.53■□□□□ 0.4
NSMCE1-214ENST00000569236 PLEKHG5O94827 1062 aa17.51■□□□□ 0.39
NSMCE1-214ENST00000569236 HAP1P54257 671 aaPredicted RBP17.51■□□□□ 0.39
NSMCE1-214ENST00000569236 EIF4G2P78344 907 aaKnown RBP eCLIP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms