RNA–Protein interactions for RNA: ENST00000568190.1

SIN3A-209, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-209ENST00000568190 PLEKHH1Q9ULM0 1364 aa11.83□□□□□ -0.52
SIN3A-209ENST00000568190 STK26Q9P289 416 aa11.83□□□□□ -0.52
SIN3A-209ENST00000568190 EIF3AQ14152 1382 aaKnown RBP11.82□□□□□ -0.52
SIN3A-209ENST00000568190 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
SIN3A-209ENST00000568190 CADPS2Q86UW7 1296 aa11.82□□□□□ -0.52
SIN3A-209ENST00000568190 SBNO2Q9Y2G9 1366 aa11.81□□□□□ -0.52
SIN3A-209ENST00000568190 ITSN1Q15811 1721 aa11.81□□□□□ -0.52
SIN3A-209ENST00000568190 MST1RQ04912 1400 aa11.81□□□□□ -0.52
SIN3A-209ENST00000568190 TOM1O60784 492 aa11.81□□□□□ -0.52
SIN3A-209ENST00000568190 RBM33Q96EV2 1170 aaKnown RBP11.81□□□□□ -0.52
SIN3A-209ENST00000568190 PRAM1Q96QH2 718 aa11.81□□□□□ -0.52
SIN3A-209ENST00000568190 TRAK1Q9UPV9 953 aa11.81□□□□□ -0.52
SIN3A-209ENST00000568190 RGPD8O14715 1765 aaPredicted RBP11.8□□□□□ -0.52
SIN3A-209ENST00000568190 USP32Q8NFA0 1604 aa11.8□□□□□ -0.52
SIN3A-209ENST00000568190 WAPLQ7Z5K2 1190 aa11.8□□□□□ -0.52
SIN3A-209ENST00000568190 C14orf37Q86TY3 774 aa11.8□□□□□ -0.52
SIN3A-209ENST00000568190 NHSL1Q5SYE7 1610 aa11.79□□□□□ -0.52
SIN3A-209ENST00000568190 KIF1AQ12756 1690 aa11.79□□□□□ -0.52
SIN3A-209ENST00000568190 TOPAZ1Q8N9V7 1692 aa11.79□□□□□ -0.52
SIN3A-209ENST00000568190 UBAP1LF5GYI3 381 aa11.79□□□□□ -0.52
SIN3A-209ENST00000568190 ATF3P18847 181 aa11.79□□□□□ -0.52
SIN3A-209ENST00000568190 TULP4Q9NRJ4 1543 aa11.79□□□□□ -0.52
SIN3A-209ENST00000568190 ANKARQ7Z5J8 1434 aa11.78□□□□□ -0.52
SIN3A-209ENST00000568190 CARD11Q9BXL7 1154 aa11.78□□□□□ -0.52
SIN3A-209ENST00000568190 POGKQ9P215 609 aa11.78□□□□□ -0.52
SIN3A-209ENST00000568190 CENPJQ9HC77 1338 aaPredicted RBP11.78□□□□□ -0.52
SIN3A-209ENST00000568190 AHDC1Q5TGY3 1603 aaPredicted RBP11.78□□□□□ -0.52
SIN3A-209ENST00000568190 C1orf167Q5SNV9 1468 aa11.77□□□□□ -0.52
SIN3A-209ENST00000568190 SLAIN2Q9P270 581 aa11.77□□□□□ -0.53
SIN3A-209ENST00000568190 USP47Q96K76 1375 aa11.75□□□□□ -0.53
SIN3A-209ENST00000568190 ATP7BP35670 1465 aa11.75□□□□□ -0.53
SIN3A-209ENST00000568190 PHLPP1O60346 1717 aa11.74□□□□□ -0.53
SIN3A-209ENST00000568190 COL16A1Q07092 1604 aaPredicted RBP11.74□□□□□ -0.53
SIN3A-209ENST00000568190 WASLO00401 505 aaPredicted RBP11.73□□□□□ -0.53
SIN3A-209ENST00000568190 SAFB2Q14151 953 aaKnown RBP eCLIP11.73□□□□□ -0.53
SIN3A-209ENST00000568190 MINK1Q8N4C8 1332 aaPredicted RBP11.73□□□□□ -0.53
SIN3A-209ENST00000568190 SLC24A1O60721 1099 aa11.72□□□□□ -0.53
SIN3A-209ENST00000568190 BRINP3Q76B58 766 aa11.72□□□□□ -0.53
SIN3A-209ENST00000568190 EVC2Q86UK5 1308 aa11.7□□□□□ -0.54
SIN3A-209ENST00000568190 PIP4K2BP78356 416 aa11.7□□□□□ -0.54
SIN3A-209ENST00000568190 TESK2Q96S53 571 aa11.7□□□□□ -0.54
SIN3A-209ENST00000568190 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
SIN3A-209ENST00000568190 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
SIN3A-209ENST00000568190 AKAP12Q02952 1782 aa11.69□□□□□ -0.54
SIN3A-209ENST00000568190 PRR36Q9H6K5 1346 aa11.69□□□□□ -0.54
SIN3A-209ENST00000568190 ST20-MTHFSA0A0A6YYL1 179 aa11.69□□□□□ -0.54
SIN3A-209ENST00000568190 PUS7Q96PZ0 661 aaKnown RBP11.69□□□□□ -0.54
SIN3A-209ENST00000568190 PXDNQ92626 1479 aa11.69□□□□□ -0.54
SIN3A-209ENST00000568190 TRPM3Q9HCF6 1732 aaPredicted RBP11.69□□□□□ -0.54
SIN3A-209ENST00000568190 CDK19Q9BWU1 502 aa11.68□□□□□ -0.54
SIN3A-209ENST00000568190 SCAF1Q9H7N4 1312 aaKnown RBP11.67□□□□□ -0.54
SIN3A-209ENST00000568190 MON2Q7Z3U7 1717 aa11.67□□□□□ -0.54
SIN3A-209ENST00000568190 MYOM1P52179 1685 aa11.67□□□□□ -0.54
SIN3A-209ENST00000568190 COL22A1Q8NFW1 1626 aaPredicted RBP11.67□□□□□ -0.54
SIN3A-209ENST00000568190 POLR3AO14802 1390 aaPredicted RBP11.67□□□□□ -0.54
SIN3A-209ENST00000568190 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
SIN3A-209ENST00000568190 NPHP3Q7Z494 1330 aa11.66□□□□□ -0.54
SIN3A-209ENST00000568190 ALS2Q96Q42 1657 aa11.66□□□□□ -0.54
SIN3A-209ENST00000568190 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.54
SIN3A-209ENST00000568190 ESCO1Q5FWF5 840 aa11.66□□□□□ -0.54
SIN3A-209ENST00000568190 NUDT16Q96DE0 195 aaKnown RBP11.66□□□□□ -0.54
SIN3A-209ENST00000568190 ORAI2Q96SN7 254 aa11.66□□□□□ -0.54
SIN3A-209ENST00000568190 CCDC61Q9Y6R9 512 aa11.66□□□□□ -0.54
SIN3A-209ENST00000568190 NINLQ9Y2I6 1382 aa11.66□□□□□ -0.54
SIN3A-209ENST00000568190 SOS2Q07890 1332 aaPredicted RBP11.65□□□□□ -0.54
SIN3A-209ENST00000568190 PHF8Q9UPP1 1060 aa11.65□□□□□ -0.54
SIN3A-209ENST00000568190 PPIP5K1Q6PFW1 1433 aa11.65□□□□□ -0.54
SIN3A-209ENST00000568190 NRKQ7Z2Y5 1582 aa11.65□□□□□ -0.54
SIN3A-209ENST00000568190 PLEKHG3A1L390 1219 aa11.64□□□□□ -0.55
SIN3A-209ENST00000568190 HSPA1LP34931 641 aa11.64□□□□□ -0.55
SIN3A-209ENST00000568190 ZEB1P37275 1124 aaPredicted RBP11.64□□□□□ -0.55
SIN3A-209ENST00000568190 SRPK2P78362 688 aaKnown RBP11.64□□□□□ -0.55
SIN3A-209ENST00000568190 DISP3Q9P2K9 1392 aa11.64□□□□□ -0.55
SIN3A-209ENST00000568190 NUTM2FA1L443 756 aa11.63□□□□□ -0.55
SIN3A-209ENST00000568190 TMF1P82094 1093 aa11.63□□□□□ -0.55
SIN3A-209ENST00000568190 CABP2Q9NPB3 220 aa11.63□□□□□ -0.55
SIN3A-209ENST00000568190 BRD4O60885 1362 aaPredicted RBP11.63□□□□□ -0.55
SIN3A-209ENST00000568190 ABCA3Q99758 1704 aa11.63□□□□□ -0.55
SIN3A-209ENST00000568190 HSPA5P11021 654 aaKnown RBP11.62□□□□□ -0.55
SIN3A-209ENST00000568190 CDCA8Q53HL2 280 aa11.62□□□□□ -0.55
SIN3A-209ENST00000568190 CRYBG1Q9Y4K1 1723 aa11.62□□□□□ -0.55
SIN3A-209ENST00000568190 SBNO1A3KN83 1393 aa11.62□□□□□ -0.55
SIN3A-209ENST00000568190 MED1Q15648 1581 aaPredicted RBP11.62□□□□□ -0.55
SIN3A-209ENST00000568190 USP54Q70EL1 1684 aa11.62□□□□□ -0.55
SIN3A-209ENST00000568190 CPSF1Q10570 1443 aaKnown RBP11.61□□□□□ -0.55
SIN3A-209ENST00000568190 FOXO3O43524 673 aa11.61□□□□□ -0.55
SIN3A-209ENST00000568190 JCADQ9P266 1359 aa11.61□□□□□ -0.55
SIN3A-209ENST00000568190 CD163L1Q9NR16 1453 aa11.61□□□□□ -0.55
SIN3A-209ENST00000568190 TNS3Q68CZ2 1445 aa11.6□□□□□ -0.55
SIN3A-209ENST00000568190 MARF1Q9Y4F3 1742 aaKnown RBP11.6□□□□□ -0.55
SIN3A-209ENST00000568190 LRRC59Q96AG4 307 aaKnown RBP11.6□□□□□ -0.55
SIN3A-209ENST00000568190 USP6P35125 1406 aa11.6□□□□□ -0.55
SIN3A-209ENST00000568190 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
SIN3A-209ENST00000568190 ACEP12821 1306 aa11.6□□□□□ -0.55
SIN3A-209ENST00000568190 PIK3C2AO00443 1686 aa11.59□□□□□ -0.55
SIN3A-209ENST00000568190 ARHGEF10O15013 1369 aa11.58□□□□□ -0.56
SIN3A-209ENST00000568190 PNPLA6Q8IY17 1366 aa11.58□□□□□ -0.56
SIN3A-209ENST00000568190 PSME1Q06323 249 aa11.58□□□□□ -0.56
SIN3A-209ENST00000568190 NGDNQ8NEJ9 315 aaKnown RBP11.58□□□□□ -0.56
SIN3A-209ENST00000568190 PMFBP1Q8TBY8 1022 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms