RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 WAPLQ7Z5K2 1190 aa17.9■□□□□ 0.46
RNF40-211ENST00000567365 TONSLQ96HA7 1378 aa17.9■□□□□ 0.46
RNF40-211ENST00000567365 CDC42BPGQ6DT37 1551 aa17.89■□□□□ 0.45
RNF40-211ENST00000567365 MST1RQ04912 1400 aa17.89■□□□□ 0.45
RNF40-211ENST00000567365 CADPS2Q86UW7 1296 aa17.88■□□□□ 0.45
RNF40-211ENST00000567365 SLAIN2Q9P270 581 aa17.87■□□□□ 0.45
RNF40-211ENST00000567365 GPRASP1Q5JY77 1395 aa17.87■□□□□ 0.45
RNF40-211ENST00000567365 ROBO1Q9Y6N7 1651 aa17.87■□□□□ 0.45
RNF40-211ENST00000567365 C14orf37Q86TY3 774 aa17.86■□□□□ 0.45
RNF40-211ENST00000567365 PHF23Q9BUL5 403 aaPredicted RBP17.86■□□□□ 0.45
RNF40-211ENST00000567365 ADGRB2O60241 1585 aa17.86■□□□□ 0.45
RNF40-211ENST00000567365 ATF3P18847 181 aa17.85■□□□□ 0.45
RNF40-211ENST00000567365 PRAM1Q96QH2 718 aa17.85■□□□□ 0.45
RNF40-211ENST00000567365 RGS17Q9UGC6 210 aaPredicted RBP17.85■□□□□ 0.45
RNF40-211ENST00000567365 RALGAPBQ86X10 1494 aa17.84■□□□□ 0.45
RNF40-211ENST00000567365 TIMELESSQ9UNS1 1208 aa17.84■□□□□ 0.45
RNF40-211ENST00000567365 TRAK1Q9UPV9 953 aa17.84■□□□□ 0.45
RNF40-211ENST00000567365 FMN2Q9NZ56 1722 aa17.83■□□□□ 0.44
RNF40-211ENST00000567365 CCER1Q8TC90 406 aaPredicted RBP17.82■□□□□ 0.44
RNF40-211ENST00000567365 C1orf167Q5SNV9 1468 aa17.82■□□□□ 0.44
RNF40-211ENST00000567365 AHDC1Q5TGY3 1603 aaPredicted RBP17.8■□□□□ 0.44
RNF40-211ENST00000567365 NHSL1Q5SYE7 1610 aa17.79■□□□□ 0.44
RNF40-211ENST00000567365 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
RNF40-211ENST00000567365 BRINP3Q76B58 766 aa17.78■□□□□ 0.44
RNF40-211ENST00000567365 POGKQ9P215 609 aa17.78■□□□□ 0.44
RNF40-211ENST00000567365 USP32Q8NFA0 1604 aa17.77■□□□□ 0.44
RNF40-211ENST00000567365 COL16A1Q07092 1604 aaPredicted RBP17.76■□□□□ 0.43
RNF40-211ENST00000567365 SAFB2Q14151 953 aaKnown RBP eCLIP17.76■□□□□ 0.43
RNF40-211ENST00000567365 QRICH2Q9H0J4 1663 aa17.74■□□□□ 0.43
RNF40-211ENST00000567365 RGPD8O14715 1765 aaPredicted RBP17.74■□□□□ 0.43
RNF40-211ENST00000567365 ORAI2Q96SN7 254 aa17.73■□□□□ 0.43
RNF40-211ENST00000567365 MINK1Q8N4C8 1332 aaPredicted RBP17.72■□□□□ 0.43
RNF40-211ENST00000567365 CENPJQ9HC77 1338 aaPredicted RBP17.72■□□□□ 0.43
RNF40-211ENST00000567365 ANKARQ7Z5J8 1434 aa17.72■□□□□ 0.43
RNF40-211ENST00000567365 PHLPP1O60346 1717 aa17.72■□□□□ 0.43
RNF40-211ENST00000567365 WASLO00401 505 aaPredicted RBP17.72■□□□□ 0.43
RNF40-211ENST00000567365 TULP4Q9NRJ4 1543 aa17.72■□□□□ 0.43
RNF40-211ENST00000567365 POTEAQ6S8J7 498 aa17.71■□□□□ 0.43
RNF40-211ENST00000567365 HIRIP3Q9BW71 556 aaPredicted RBP17.71■□□□□ 0.43
RNF40-211ENST00000567365 PRR36Q9H6K5 1346 aa17.71■□□□□ 0.42
RNF40-211ENST00000567365 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
RNF40-211ENST00000567365 ATP7BP35670 1465 aa17.69■□□□□ 0.42
RNF40-211ENST00000567365 SBNO2Q9Y2G9 1366 aa17.69■□□□□ 0.42
RNF40-211ENST00000567365 KIF1AQ12756 1690 aa17.69■□□□□ 0.42
RNF40-211ENST00000567365 EIF3AQ14152 1382 aaKnown RBP17.67■□□□□ 0.42
RNF40-211ENST00000567365 NUTM2FA1L443 756 aa17.67■□□□□ 0.42
RNF40-211ENST00000567365 PXDNQ92626 1479 aa17.67■□□□□ 0.42
RNF40-211ENST00000567365 TOPAZ1Q8N9V7 1692 aa17.67■□□□□ 0.42
RNF40-211ENST00000567365 SOS2Q07890 1332 aaPredicted RBP17.67■□□□□ 0.42
RNF40-211ENST00000567365 ESCO1Q5FWF5 840 aa17.66■□□□□ 0.42
RNF40-211ENST00000567365 DDX17Q92841 729 aaKnown RBP17.66■□□□□ 0.42
RNF40-211ENST00000567365 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
RNF40-211ENST00000567365 SHPRHQ149N8 1683 aa17.64■□□□□ 0.42
RNF40-211ENST00000567365 ITSN1Q15811 1721 aa17.64■□□□□ 0.41
RNF40-211ENST00000567365 PHF8Q9UPP1 1060 aa17.63■□□□□ 0.41
RNF40-211ENST00000567365 NUDT16Q96DE0 195 aaKnown RBP17.62■□□□□ 0.41
RNF40-211ENST00000567365 TESK2Q96S53 571 aa17.62■□□□□ 0.41
RNF40-211ENST00000567365 NPHP3Q7Z494 1330 aa17.62■□□□□ 0.41
RNF40-211ENST00000567365 JCADQ9P266 1359 aa17.62■□□□□ 0.41
RNF40-211ENST00000567365 FOXO3O43524 673 aa17.61■□□□□ 0.41
RNF40-211ENST00000567365 USP47Q96K76 1375 aa17.61■□□□□ 0.41
RNF40-211ENST00000567365 TRPM3Q9HCF6 1732 aaPredicted RBP17.59■□□□□ 0.41
RNF40-211ENST00000567365 CCDC61Q9Y6R9 512 aa17.59■□□□□ 0.41
RNF40-211ENST00000567365 POLR3AO14802 1390 aaPredicted RBP17.58■□□□□ 0.4
RNF40-211ENST00000567365 EVC2Q86UK5 1308 aa17.58■□□□□ 0.4
RNF40-211ENST00000567365 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
RNF40-211ENST00000567365 PLEKHG3A1L390 1219 aa17.58■□□□□ 0.4
RNF40-211ENST00000567365 LRRC59Q96AG4 307 aaKnown RBP17.58■□□□□ 0.4
RNF40-211ENST00000567365 COL22A1Q8NFW1 1626 aaPredicted RBP17.58■□□□□ 0.4
RNF40-211ENST00000567365 PNPLA6Q8IY17 1366 aa17.57■□□□□ 0.4
RNF40-211ENST00000567365 PMFBP1Q8TBY8 1022 aa17.57■□□□□ 0.4
RNF40-211ENST00000567365 CABP2Q9NPB3 220 aa17.57■□□□□ 0.4
RNF40-211ENST00000567365 SRPK2P78362 688 aaKnown RBP17.55■□□□□ 0.4
RNF40-211ENST00000567365 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
RNF40-211ENST00000567365 LRP6O75581 1613 aa17.54■□□□□ 0.4
RNF40-211ENST00000567365 SPATA31A3Q5VYP0 1347 aa17.54■□□□□ 0.4
RNF40-211ENST00000567365 XPCQ01831 940 aaPredicted RBP17.54■□□□□ 0.4
RNF40-211ENST00000567365 KRT28Q7Z3Y7 464 aa17.54■□□□□ 0.4
RNF40-211ENST00000567365 PUS7Q96PZ0 661 aaKnown RBP17.54■□□□□ 0.4
RNF40-211ENST00000567365 ALS2Q96Q42 1657 aa17.54■□□□□ 0.4
RNF40-211ENST00000567365 PPIP5K1Q6PFW1 1433 aa17.54■□□□□ 0.4
RNF40-211ENST00000567365 SPATA31A6Q5VVP1 1343 aa17.53■□□□□ 0.4
RNF40-211ENST00000567365 ACEP12821 1306 aa17.52■□□□□ 0.4
RNF40-211ENST00000567365 TNS3Q68CZ2 1445 aa17.52■□□□□ 0.4
RNF40-211ENST00000567365 ATAD2Q6PL18 1390 aa17.52■□□□□ 0.39
RNF40-211ENST00000567365 SSH2Q76I76 1423 aa17.5■□□□□ 0.39
RNF40-211ENST00000567365 NGDNQ8NEJ9 315 aaKnown RBP17.5■□□□□ 0.39
RNF40-211ENST00000567365 AKAP12Q02952 1782 aa17.5■□□□□ 0.39
RNF40-211ENST00000567365 CPSF1Q10570 1443 aaKnown RBP17.49■□□□□ 0.39
RNF40-211ENST00000567365 SLC24A1O60721 1099 aa17.49■□□□□ 0.39
RNF40-211ENST00000567365 PSME1Q06323 249 aa17.49■□□□□ 0.39
RNF40-211ENST00000567365 CABP1Q9NZU7 370 aa17.49■□□□□ 0.39
RNF40-211ENST00000567365 CD163L1Q9NR16 1453 aa17.49■□□□□ 0.39
RNF40-211ENST00000567365 CRYBG1Q9Y4K1 1723 aa17.48■□□□□ 0.39
RNF40-211ENST00000567365 ABCA3Q99758 1704 aa17.47■□□□□ 0.39
RNF40-211ENST00000567365 USP6P35125 1406 aa17.47■□□□□ 0.39
RNF40-211ENST00000567365 NRKQ7Z2Y5 1582 aa17.46■□□□□ 0.39
RNF40-211ENST00000567365 BRD4O60885 1362 aaPredicted RBP17.46■□□□□ 0.39
RNF40-211ENST00000567365 MON2Q7Z3U7 1717 aa17.46■□□□□ 0.39
RNF40-211ENST00000567365 ARHGEF10O15013 1369 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms