RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.93■■■□□ 2.22
RNF40-210ENST00000566811 NBPF8Q3BBV2 869 aa28.92■■■□□ 2.22
RNF40-210ENST00000566811 CDC42BPGQ6DT37 1551 aa28.92■■■□□ 2.22
RNF40-210ENST00000566811 EIF3AQ14152 1382 aaKnown RBP28.91■■■□□ 2.22
RNF40-210ENST00000566811 STK26Q9P289 416 aa28.91■■■□□ 2.22
RNF40-210ENST00000566811 ADGRB2O60241 1585 aa28.9■■■□□ 2.22
RNF40-210ENST00000566811 NBPF1Q3BBV0 1214 aa28.88■■■□□ 2.21
RNF40-210ENST00000566811 C19orf44Q9H6X5 657 aa28.87■■■□□ 2.21
RNF40-210ENST00000566811 C14orf37Q86TY3 774 aa28.86■■■□□ 2.21
RNF40-210ENST00000566811 TRAK1Q9UPV9 953 aa28.85■■■□□ 2.21
RNF40-210ENST00000566811 QRICH2Q9H0J4 1663 aa28.85■■■□□ 2.21
RNF40-210ENST00000566811 CADPS2Q86UW7 1296 aa28.82■■■□□ 2.2
RNF40-210ENST00000566811 CARD11Q9BXL7 1154 aa28.82■■■□□ 2.2
RNF40-210ENST00000566811 POGKQ9P215 609 aa28.82■■■□□ 2.2
RNF40-210ENST00000566811 RGS17Q9UGC6 210 aaPredicted RBP28.82■■■□□ 2.2
RNF40-210ENST00000566811 PRAM1Q96QH2 718 aa28.81■■■□□ 2.2
RNF40-210ENST00000566811 PLEKHH1Q9ULM0 1364 aa28.79■■■□□ 2.2
RNF40-210ENST00000566811 FMN2Q9NZ56 1722 aa28.79■■■□□ 2.2
RNF40-210ENST00000566811 ATF3P18847 181 aa28.78■■■□□ 2.2
RNF40-210ENST00000566811 WAPLQ7Z5K2 1190 aa28.77■■■□□ 2.2
RNF40-210ENST00000566811 RBM33Q96EV2 1170 aaKnown RBP28.77■■■□□ 2.2
RNF40-210ENST00000566811 CENPJQ9HC77 1338 aaPredicted RBP28.76■■■□□ 2.19
RNF40-210ENST00000566811 SBNO2Q9Y2G9 1366 aa28.75■■■□□ 2.19
RNF40-210ENST00000566811 MST1RQ04912 1400 aa28.71■■■□□ 2.19
RNF40-210ENST00000566811 ITSN1Q15811 1721 aa28.7■■■□□ 2.19
RNF40-210ENST00000566811 SLC24A1O60721 1099 aa28.69■■■□□ 2.18
RNF40-210ENST00000566811 ROBO1Q9Y6N7 1651 aa28.69■■■□□ 2.18
RNF40-210ENST00000566811 ANKARQ7Z5J8 1434 aa28.69■■■□□ 2.18
RNF40-210ENST00000566811 USP47Q96K76 1375 aa28.68■■■□□ 2.18
RNF40-210ENST00000566811 TULP4Q9NRJ4 1543 aa28.68■■■□□ 2.18
RNF40-210ENST00000566811 KIF1AQ12756 1690 aa28.67■■■□□ 2.18
RNF40-210ENST00000566811 SAFB2Q14151 953 aaKnown RBP eCLIP28.66■■■□□ 2.18
RNF40-210ENST00000566811 SLAIN2Q9P270 581 aa28.66■■■□□ 2.18
RNF40-210ENST00000566811 C1orf167Q5SNV9 1468 aa28.64■■■□□ 2.17
RNF40-210ENST00000566811 MINK1Q8N4C8 1332 aaPredicted RBP28.64■■■□□ 2.17
RNF40-210ENST00000566811 POTEAQ6S8J7 498 aa28.63■■■□□ 2.17
RNF40-210ENST00000566811 ZEB1P37275 1124 aaPredicted RBP28.61■■■□□ 2.17
RNF40-210ENST00000566811 USP32Q8NFA0 1604 aa28.61■■■□□ 2.17
RNF40-210ENST00000566811 TOPAZ1Q8N9V7 1692 aa28.61■■■□□ 2.17
RNF40-210ENST00000566811 RGPD8O14715 1765 aaPredicted RBP28.6■■■□□ 2.17
RNF40-210ENST00000566811 WASLO00401 505 aaPredicted RBP28.6■■■□□ 2.17
RNF40-210ENST00000566811 NHSL1Q5SYE7 1610 aa28.59■■■□□ 2.17
RNF40-210ENST00000566811 AHDC1Q5TGY3 1603 aaPredicted RBP28.58■■■□□ 2.17
RNF40-210ENST00000566811 EVC2Q86UK5 1308 aa28.58■■■□□ 2.17
RNF40-210ENST00000566811 HIRIP3Q9BW71 556 aaPredicted RBP28.57■■■□□ 2.16
RNF40-210ENST00000566811 ATP7BP35670 1465 aa28.57■■■□□ 2.16
RNF40-210ENST00000566811 EIF4G2P78344 907 aaKnown RBP eCLIP28.54■■■□□ 2.16
RNF40-210ENST00000566811 ST20-MTHFSA0A0A6YYL1 179 aa28.53■■■□□ 2.16
RNF40-210ENST00000566811 PHLPP1O60346 1717 aa28.52■■■□□ 2.16
RNF40-210ENST00000566811 BRINP3Q76B58 766 aa28.51■■■□□ 2.15
RNF40-210ENST00000566811 CDK19Q9BWU1 502 aa28.5■■■□□ 2.15
RNF40-210ENST00000566811 ATAD2Q6PL18 1390 aa28.5■■■□□ 2.15
RNF40-210ENST00000566811 PUS7Q96PZ0 661 aaKnown RBP28.49■■■□□ 2.15
RNF40-210ENST00000566811 TESK2Q96S53 571 aa28.49■■■□□ 2.15
RNF40-210ENST00000566811 SRPK2P78362 688 aaKnown RBP28.47■■■□□ 2.15
RNF40-210ENST00000566811 ESCO1Q5FWF5 840 aa28.46■■■□□ 2.15
RNF40-210ENST00000566811 COL16A1Q07092 1604 aaPredicted RBP28.45■■■□□ 2.14
RNF40-210ENST00000566811 TMF1P82094 1093 aa28.45■■■□□ 2.14
RNF40-210ENST00000566811 CDCA8Q53HL2 280 aa28.44■■■□□ 2.14
RNF40-210ENST00000566811 NUDT16Q96DE0 195 aaKnown RBP28.44■■■□□ 2.14
RNF40-210ENST00000566811 JCADQ9P266 1359 aa28.44■■■□□ 2.14
RNF40-210ENST00000566811 NPHP3Q7Z494 1330 aa28.43■■■□□ 2.14
RNF40-210ENST00000566811 CCDC61Q9Y6R9 512 aa28.43■■■□□ 2.14
RNF40-210ENST00000566811 PRR36Q9H6K5 1346 aa28.43■■■□□ 2.14
RNF40-210ENST00000566811 NINLQ9Y2I6 1382 aa28.42■■■□□ 2.14
RNF40-210ENST00000566811 NUTM2FA1L443 756 aa28.42■■■□□ 2.14
RNF40-210ENST00000566811 ORAI2Q96SN7 254 aa28.42■■■□□ 2.14
RNF40-210ENST00000566811 PHF8Q9UPP1 1060 aa28.42■■■□□ 2.14
RNF40-210ENST00000566811 HSPA5P11021 654 aaKnown RBP28.4■■■□□ 2.14
RNF40-210ENST00000566811 PPIP5K1Q6PFW1 1433 aa28.4■■■□□ 2.14
RNF40-210ENST00000566811 AKAP12Q02952 1782 aa28.38■■■□□ 2.13
RNF40-210ENST00000566811 CABP2Q9NPB3 220 aa28.38■■■□□ 2.13
RNF40-210ENST00000566811 PXDNQ92626 1479 aa28.38■■■□□ 2.13
RNF40-210ENST00000566811 POLR3AO14802 1390 aaPredicted RBP28.37■■■□□ 2.13
RNF40-210ENST00000566811 SHPRHQ149N8 1683 aa28.36■■■□□ 2.13
RNF40-210ENST00000566811 PLEKHG3A1L390 1219 aa28.35■■■□□ 2.13
RNF40-210ENST00000566811 SOS2Q07890 1332 aaPredicted RBP28.34■■■□□ 2.13
RNF40-210ENST00000566811 BRD4O60885 1362 aaPredicted RBP28.34■■■□□ 2.13
RNF40-210ENST00000566811 TRPM3Q9HCF6 1732 aaPredicted RBP28.33■■■□□ 2.13
RNF40-210ENST00000566811 LRP6O75581 1613 aa28.32■■■□□ 2.12
RNF40-210ENST00000566811 MYOM1P52179 1685 aa28.32■■■□□ 2.12
RNF40-210ENST00000566811 MON2Q7Z3U7 1717 aa28.32■■■□□ 2.12
RNF40-210ENST00000566811 FOXO3O43524 673 aa28.3■■■□□ 2.12
RNF40-210ENST00000566811 PSME1Q06323 249 aa28.3■■■□□ 2.12
RNF40-210ENST00000566811 NGDNQ8NEJ9 315 aaKnown RBP28.3■■■□□ 2.12
RNF40-210ENST00000566811 SBNO1A3KN83 1393 aa28.29■■■□□ 2.12
RNF40-210ENST00000566811 COL22A1Q8NFW1 1626 aaPredicted RBP28.29■■■□□ 2.12
RNF40-210ENST00000566811 SPATA31A6Q5VVP1 1343 aa28.28■■■□□ 2.12
RNF40-210ENST00000566811 PMFBP1Q8TBY8 1022 aa28.28■■■□□ 2.12
RNF40-210ENST00000566811 LRRC59Q96AG4 307 aaKnown RBP28.28■■■□□ 2.12
RNF40-210ENST00000566811 ALS2Q96Q42 1657 aa28.27■■■□□ 2.12
RNF40-210ENST00000566811 NRKQ7Z2Y5 1582 aa28.27■■■□□ 2.12
RNF40-210ENST00000566811 ACEP12821 1306 aa28.26■■■□□ 2.11
RNF40-210ENST00000566811 TNS3Q68CZ2 1445 aa28.26■■■□□ 2.11
RNF40-210ENST00000566811 ZNF692Q9BU19 519 aaPredicted RBP28.25■■■□□ 2.11
RNF40-210ENST00000566811 CABP1Q9NZU7 370 aa28.25■■■□□ 2.11
RNF40-210ENST00000566811 CPSF1Q10570 1443 aaKnown RBP28.25■■■□□ 2.11
RNF40-210ENST00000566811 MEX3CQ5U5Q3 659 aaKnown RBP28.24■■■□□ 2.11
RNF40-210ENST00000566811 KRT28Q7Z3Y7 464 aa28.23■■■□□ 2.11
RNF40-210ENST00000566811 USP6P35125 1406 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms