RNA–Protein interactions for RNA: ENST00000565774.5

TM6SF1-207, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-207ENST00000565774 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
TM6SF1-207ENST00000565774 COPS2P61201 443 aa12.62□□□□□ -0.39
TM6SF1-207ENST00000565774 SCUBE3Q8IX30 993 aa12.62□□□□□ -0.39
TM6SF1-207ENST00000565774 PCDHGC3Q9UN70 934 aa12.62□□□□□ -0.39
TM6SF1-207ENST00000565774 LILRB3O75022 631 aa12.61□□□□□ -0.39
TM6SF1-207ENST00000565774 SALL2Q9Y467 1007 aaPredicted RBP12.61□□□□□ -0.39
TM6SF1-207ENST00000565774 MMRN1Q13201 1228 aa12.6□□□□□ -0.39
TM6SF1-207ENST00000565774 PPP2R2DQ66LE6 453 aa12.6□□□□□ -0.39
TM6SF1-207ENST00000565774 FMNL1O95466 1100 aaPredicted RBP12.59□□□□□ -0.39
TM6SF1-207ENST00000565774 HRCP23327 699 aa12.59□□□□□ -0.39
TM6SF1-207ENST00000565774 QPCTQ16769 361 aa12.59□□□□□ -0.39
TM6SF1-207ENST00000565774 MTRQ99707 1265 aa12.59□□□□□ -0.39
TM6SF1-207ENST00000565774 IL21Q9HBE4 155 aa12.59□□□□□ -0.39
TM6SF1-207ENST00000565774 CABLES1Q8TDN4 633 aa12.58□□□□□ -0.4
TM6SF1-207ENST00000565774 RFC5P40937 340 aa12.57□□□□□ -0.4
TM6SF1-207ENST00000565774 TMEM259Q4ZIN3 620 aa12.57□□□□□ -0.4
TM6SF1-207ENST00000565774 RETREG3Q86VR2 466 aa12.57□□□□□ -0.4
TM6SF1-207ENST00000565774 ZPR1O75312 459 aa12.55□□□□□ -0.4
TM6SF1-207ENST00000565774 BRICD5Q6PL45 260 aa12.55□□□□□ -0.4
TM6SF1-207ENST00000565774 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
TM6SF1-207ENST00000565774 USB1Q9BQ65 265 aaKnown RBP12.55□□□□□ -0.4
TM6SF1-207ENST00000565774 TJAP1Q5JTD0 557 aa12.54□□□□□ -0.4
TM6SF1-207ENST00000565774 RNF19BQ6ZMZ0 732 aa12.54□□□□□ -0.4
TM6SF1-207ENST00000565774 RTL5Q5HYW3 569 aaPredicted RBP12.53□□□□□ -0.4
TM6SF1-207ENST00000565774 SYMPKQ92797 1274 aaKnown RBP12.53□□□□□ -0.4
TM6SF1-207ENST00000565774 SPSB2Q99619 263 aa12.53□□□□□ -0.4
TM6SF1-207ENST00000565774 PRR7Q8TB68 274 aa12.52□□□□□ -0.41
TM6SF1-207ENST00000565774 THAP11Q96EK4 314 aa12.52□□□□□ -0.41
TM6SF1-207ENST00000565774 FLIIQ13045 1269 aa12.51□□□□□ -0.41
TM6SF1-207ENST00000565774 ERICH6Q7L0X2 663 aa12.51□□□□□ -0.41
TM6SF1-207ENST00000565774 BANK1Q8NDB2 785 aa12.51□□□□□ -0.41
TM6SF1-207ENST00000565774 TSC1Q92574 1164 aa12.51□□□□□ -0.41
TM6SF1-207ENST00000565774 AP1G2O75843 785 aa12.5□□□□□ -0.41
TM6SF1-207ENST00000565774 ADH1BP00325 375 aa12.5□□□□□ -0.41
TM6SF1-207ENST00000565774 KCNC4Q03721 635 aa12.5□□□□□ -0.41
TM6SF1-207ENST00000565774 ITGBL1O95965 494 aaPredicted RBP12.48□□□□□ -0.41
TM6SF1-207ENST00000565774 MSS51Q4VC12 460 aa12.48□□□□□ -0.41
TM6SF1-207ENST00000565774 DESI1Q6ICB0 168 aa12.48□□□□□ -0.41
TM6SF1-207ENST00000565774 ZNF516Q92618 1163 aa12.48□□□□□ -0.41
TM6SF1-207ENST00000565774 CFAP99D6REC4 459 aa12.47□□□□□ -0.41
TM6SF1-207ENST00000565774 TLL1O43897 1013 aa12.47□□□□□ -0.41
TM6SF1-207ENST00000565774 APBB1O00213 710 aa12.46□□□□□ -0.41
TM6SF1-207ENST00000565774 FBXO31Q5XUX0 539 aaPredicted RBP12.46□□□□□ -0.41
TM6SF1-207ENST00000565774 SLC6A16Q9GZN6 736 aa12.44□□□□□ -0.42
TM6SF1-207ENST00000565774 USP17L8P0C7I0 530 aa12.43□□□□□ -0.42
TM6SF1-207ENST00000565774 JUNDP17535 347 aa12.43□□□□□ -0.42
TM6SF1-207ENST00000565774 FAM160A2Q8N612 972 aaPredicted RBP12.41□□□□□ -0.42
TM6SF1-207ENST00000565774 GGCXP38435 758 aa12.4□□□□□ -0.42
TM6SF1-207ENST00000565774 CTDSPL2Q05D32 466 aa12.4□□□□□ -0.42
TM6SF1-207ENST00000565774 MCM6Q14566 821 aa12.4□□□□□ -0.42
TM6SF1-207ENST00000565774 SOCS7O14512 581 aa12.39□□□□□ -0.43
TM6SF1-207ENST00000565774 DXOO77932 396 aaKnown RBP12.39□□□□□ -0.43
TM6SF1-207ENST00000565774 MMP16P51512 607 aa12.39□□□□□ -0.43
TM6SF1-207ENST00000565774 LYPD8Q6UX82 237 aa12.39□□□□□ -0.43
TM6SF1-207ENST00000565774 C14orf37Q86TY3 774 aa12.39□□□□□ -0.43
TM6SF1-207ENST00000565774 NKX2-3Q8TAU0 364 aa12.39□□□□□ -0.43
TM6SF1-207ENST00000565774 PRM3Q9NNZ6 103 aa12.39□□□□□ -0.43
TM6SF1-207ENST00000565774 PTPRNQ16849 979 aa12.38□□□□□ -0.43
TM6SF1-207ENST00000565774 PRDM9Q9NQV7 894 aa12.37□□□□□ -0.43
TM6SF1-207ENST00000565774 S1PR4O95977 384 aa12.36□□□□□ -0.43
TM6SF1-207ENST00000565774 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
TM6SF1-207ENST00000565774 SNRKQ9NRH2 765 aa12.36□□□□□ -0.43
TM6SF1-207ENST00000565774 CCNYL3P0C7X3 344 aa12.35□□□□□ -0.43
TM6SF1-207ENST00000565774 NUDT12Q9BQG2 462 aa12.35□□□□□ -0.43
TM6SF1-207ENST00000565774 RAD21O60216 631 aa12.34□□□□□ -0.43
TM6SF1-207ENST00000565774 MTMR14Q8NCE2 650 aa12.34□□□□□ -0.43
TM6SF1-207ENST00000565774 PNMA1Q8ND90 353 aa12.34□□□□□ -0.43
TM6SF1-207ENST00000565774 LRRN4Q8WUT4 740 aa12.34□□□□□ -0.43
TM6SF1-207ENST00000565774 PER1O15534 1290 aaPredicted RBP12.33□□□□□ -0.44
TM6SF1-207ENST00000565774 IFFO2Q5TF58 517 aa12.32□□□□□ -0.44
TM6SF1-207ENST00000565774 CTHP32929 405 aa12.31□□□□□ -0.44
TM6SF1-207ENST00000565774 CCDC24Q8N4L8 307 aa12.31□□□□□ -0.44
TM6SF1-207ENST00000565774 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
TM6SF1-207ENST00000565774 HMX1Q9NP08 348 aaPredicted RBP12.29□□□□□ -0.44
TM6SF1-207ENST00000565774 EVA1BQ9NVM1 165 aa12.29□□□□□ -0.44
TM6SF1-207ENST00000565774 FCF1Q9Y324 198 aaKnown RBP12.29□□□□□ -0.44
TM6SF1-207ENST00000565774 NDUFB9Q9Y6M9 179 aa12.29□□□□□ -0.44
TM6SF1-207ENST00000565774 F12P00748 615 aaPredicted RBP12.27□□□□□ -0.45
TM6SF1-207ENST00000565774 KCNH2Q12809 1159 aa12.27□□□□□ -0.45
TM6SF1-207ENST00000565774 WWC1Q8IX03 1113 aa12.27□□□□□ -0.45
TM6SF1-207ENST00000565774 ANKLE1Q8NAG6 615 aa12.27□□□□□ -0.45
TM6SF1-207ENST00000565774 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.27□□□□□ -0.45
TM6SF1-207ENST00000565774 NR6A1Q15406 480 aa12.26□□□□□ -0.45
TM6SF1-207ENST00000565774 PPP1R18Q6NYC8 613 aa12.26□□□□□ -0.45
TM6SF1-207ENST00000565774 ARMC2Q8NEN0 867 aa12.26□□□□□ -0.45
TM6SF1-207ENST00000565774 PLSCR2Q9NRY7 297 aa12.26□□□□□ -0.45
TM6SF1-207ENST00000565774 RNF223E7ERA6 249 aa12.25□□□□□ -0.45
TM6SF1-207ENST00000565774 GJD4Q96KN9 370 aaPredicted RBP12.25□□□□□ -0.45
TM6SF1-207ENST00000565774 MAP10Q9P2G4 905 aa12.25□□□□□ -0.45
TM6SF1-207ENST00000565774 TRIM34Q9BYJ4 488 aa12.24□□□□□ -0.45
TM6SF1-207ENST00000565774 TIMELESSQ9UNS1 1208 aa12.24□□□□□ -0.45
TM6SF1-207ENST00000565774 ZBTB24O43167 697 aaPredicted RBP12.23□□□□□ -0.45
TM6SF1-207ENST00000565774 COG6Q9Y2V7 657 aa12.23□□□□□ -0.45
TM6SF1-207ENST00000565774 PPEF1O14829 653 aaPredicted RBP12.22□□□□□ -0.45
TM6SF1-207ENST00000565774 ZMYND15Q9H091 742 aa12.22□□□□□ -0.45
TM6SF1-207ENST00000565774 ZC3H4Q9UPT8 1303 aaKnown RBP12.21□□□□□ -0.45
TM6SF1-207ENST00000565774 NBPF14Q5TI25 921 aa12.21□□□□□ -0.45
TM6SF1-207ENST00000565774 GDPD2Q9HCC8 539 aa12.21□□□□□ -0.45
TM6SF1-207ENST00000565774 TBC1D2BQ9UPU7 963 aa12.21□□□□□ -0.45
TM6SF1-207ENST00000565774 A6NJR5 290 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms