RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 CFAP70Q5T0N1 1121 aa10.3□□□□□ -0.76
MAP1LC3B-205ENST00000564638 TMEM132EQ6IEE7 984 aa10.3□□□□□ -0.76
MAP1LC3B-205ENST00000564638 C14orf37Q86TY3 774 aa10.3□□□□□ -0.76
MAP1LC3B-205ENST00000564638 STK26Q9P289 416 aa10.3□□□□□ -0.76
MAP1LC3B-205ENST00000564638 XRN1Q8IZH2 1706 aaKnown RBP10.3□□□□□ -0.76
MAP1LC3B-205ENST00000564638 NRXN1Q9ULB1 1477 aa10.3□□□□□ -0.76
MAP1LC3B-205ENST00000564638 TMEM94Q12767 1356 aa10.29□□□□□ -0.76
MAP1LC3B-205ENST00000564638 LRP6O75581 1613 aa10.29□□□□□ -0.76
MAP1LC3B-205ENST00000564638 ASXL1Q8IXJ9 1541 aa10.28□□□□□ -0.76
MAP1LC3B-205ENST00000564638 STAC3Q96MF2 364 aa10.28□□□□□ -0.76
MAP1LC3B-205ENST00000564638 ROCK2O75116 1388 aaKnown RBP10.27□□□□□ -0.76
MAP1LC3B-205ENST00000564638 CARD11Q9BXL7 1154 aa10.27□□□□□ -0.77
MAP1LC3B-205ENST00000564638 C14orf93Q9H972 538 aaKnown RBP10.27□□□□□ -0.77
MAP1LC3B-205ENST00000564638 KIF7Q2M1P5 1343 aa10.27□□□□□ -0.77
MAP1LC3B-205ENST00000564638 ROBO1Q9Y6N7 1651 aa10.26□□□□□ -0.77
MAP1LC3B-205ENST00000564638 LRPPRCP42704 1394 aaKnown RBP10.26□□□□□ -0.77
MAP1LC3B-205ENST00000564638 MSH6P52701 1360 aa10.26□□□□□ -0.77
MAP1LC3B-205ENST00000564638 GPRASP1Q5JY77 1395 aa10.26□□□□□ -0.77
MAP1LC3B-205ENST00000564638 YTHDC2Q9H6S0 1430 aaKnown RBP10.25□□□□□ -0.77
MAP1LC3B-205ENST00000564638 KNDC1Q76NI1 1749 aa10.25□□□□□ -0.77
MAP1LC3B-205ENST00000564638 ROBO2Q9HCK4 1378 aa10.25□□□□□ -0.77
MAP1LC3B-205ENST00000564638 PTCH1Q13635 1447 aa10.24□□□□□ -0.77
MAP1LC3B-205ENST00000564638 KIAA1210Q9ULL0 1709 aa10.24□□□□□ -0.77
MAP1LC3B-205ENST00000564638 TRAK1Q9UPV9 953 aa10.24□□□□□ -0.77
MAP1LC3B-205ENST00000564638 GTF3C3Q9Y5Q9 886 aa10.24□□□□□ -0.77
MAP1LC3B-205ENST00000564638 SAFB2Q14151 953 aaKnown RBP eCLIP10.23□□□□□ -0.77
MAP1LC3B-205ENST00000564638 WAPLQ7Z5K2 1190 aa10.23□□□□□ -0.77
MAP1LC3B-205ENST00000564638 NALCNQ8IZF0 1738 aa10.23□□□□□ -0.77
MAP1LC3B-205ENST00000564638 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.23□□□□□ -0.77
MAP1LC3B-205ENST00000564638 ADGRB1O14514 1584 aa10.22□□□□□ -0.77
MAP1LC3B-205ENST00000564638 C11orf95C9JLR9 678 aaPredicted RBP10.22□□□□□ -0.77
MAP1LC3B-205ENST00000564638 NBPF1Q3BBV0 1214 aa10.22□□□□□ -0.77
MAP1LC3B-205ENST00000564638 POGKQ9P215 609 aa10.22□□□□□ -0.77
MAP1LC3B-205ENST00000564638 ABCC11Q96J66 1382 aa10.22□□□□□ -0.77
MAP1LC3B-205ENST00000564638 PLEKHH1Q9ULM0 1364 aa10.22□□□□□ -0.77
MAP1LC3B-205ENST00000564638 ATF3P18847 181 aa10.21□□□□□ -0.77
MAP1LC3B-205ENST00000564638 TECPR2O15040 1411 aa10.21□□□□□ -0.78
MAP1LC3B-205ENST00000564638 ADGRL3Q9HAR2 1447 aa10.21□□□□□ -0.78
MAP1LC3B-205ENST00000564638 NCOA3Q9Y6Q9 1424 aa10.21□□□□□ -0.78
MAP1LC3B-205ENST00000564638 COL16A1Q07092 1604 aaPredicted RBP10.2□□□□□ -0.78
MAP1LC3B-205ENST00000564638 ARHGEF28Q8N1W1 1705 aaKnown RBP10.2□□□□□ -0.78
MAP1LC3B-205ENST00000564638 PRAM1Q96QH2 718 aa10.2□□□□□ -0.78
MAP1LC3B-205ENST00000564638 C19orf44Q9H6X5 657 aa10.2□□□□□ -0.78
MAP1LC3B-205ENST00000564638 DLC1Q96QB1 1528 aa10.19□□□□□ -0.78
MAP1LC3B-205ENST00000564638 CADPS2Q86UW7 1296 aa10.19□□□□□ -0.78
MAP1LC3B-205ENST00000564638 CDK12Q9NYV4 1490 aaPredicted RBP10.18□□□□□ -0.78
MAP1LC3B-205ENST00000564638 JCADQ9P266 1359 aa10.18□□□□□ -0.78
MAP1LC3B-205ENST00000564638 MINK1Q8N4C8 1332 aaPredicted RBP10.18□□□□□ -0.78
MAP1LC3B-205ENST00000564638 ST20-MTHFSA0A0A6YYL1 179 aa10.18□□□□□ -0.78
MAP1LC3B-205ENST00000564638 POLR3GLQ9BT43 218 aa10.18□□□□□ -0.78
MAP1LC3B-205ENST00000564638 DCCP43146 1447 aa10.17□□□□□ -0.78
MAP1LC3B-205ENST00000564638 PHLPP1O60346 1717 aa10.17□□□□□ -0.78
MAP1LC3B-205ENST00000564638 NUTM2FA1L443 756 aa10.17□□□□□ -0.78
MAP1LC3B-205ENST00000564638 RGS12O14924 1447 aa10.16□□□□□ -0.78
MAP1LC3B-205ENST00000564638 SIRT1Q96EB6 747 aa10.16□□□□□ -0.78
MAP1LC3B-205ENST00000564638 PRKRIP1Q9H875 184 aaPredicted RBP10.16□□□□□ -0.78
MAP1LC3B-205ENST00000564638 SLAIN2Q9P270 581 aa10.16□□□□□ -0.78
MAP1LC3B-205ENST00000564638 CDC42BPGQ6DT37 1551 aa10.16□□□□□ -0.78
MAP1LC3B-205ENST00000564638 EIF3AQ14152 1382 aaKnown RBP10.15□□□□□ -0.78
MAP1LC3B-205ENST00000564638 RXRBP28702 533 aa10.15□□□□□ -0.78
MAP1LC3B-205ENST00000564638 ZNF772Q68DY9 489 aaPredicted RBP10.15□□□□□ -0.78
MAP1LC3B-205ENST00000564638 QRICH2Q9H0J4 1663 aa10.15□□□□□ -0.79
MAP1LC3B-205ENST00000564638 MST1RQ04912 1400 aa10.15□□□□□ -0.79
MAP1LC3B-205ENST00000564638 CENPJQ9HC77 1338 aaPredicted RBP10.14□□□□□ -0.79
MAP1LC3B-205ENST00000564638 FMN2Q9NZ56 1722 aa10.14□□□□□ -0.79
MAP1LC3B-205ENST00000564638 KTN1Q86UP2 1357 aaKnown RBP10.14□□□□□ -0.79
MAP1LC3B-205ENST00000564638 C1orf167Q5SNV9 1468 aa10.13□□□□□ -0.79
MAP1LC3B-205ENST00000564638 RGPD8O14715 1765 aaPredicted RBP10.13□□□□□ -0.79
MAP1LC3B-205ENST00000564638 BRINP3Q76B58 766 aa10.12□□□□□ -0.79
MAP1LC3B-205ENST00000564638 ADGRB2O60241 1585 aa10.12□□□□□ -0.79
MAP1LC3B-205ENST00000564638 SPATA31A6Q5VVP1 1343 aa10.11□□□□□ -0.79
MAP1LC3B-205ENST00000564638 TMF1P82094 1093 aa10.11□□□□□ -0.79
MAP1LC3B-205ENST00000564638 ESCO1Q5FWF5 840 aa10.11□□□□□ -0.79
MAP1LC3B-205ENST00000564638 ORAI2Q96SN7 254 aa10.11□□□□□ -0.79
MAP1LC3B-205ENST00000564638 MRS2Q9HD23 443 aa10.11□□□□□ -0.79
MAP1LC3B-205ENST00000564638 SHPRHQ149N8 1683 aa10.1□□□□□ -0.79
MAP1LC3B-205ENST00000564638 WASLO00401 505 aaPredicted RBP10.1□□□□□ -0.79
MAP1LC3B-205ENST00000564638 TESK2Q96S53 571 aa10.1□□□□□ -0.79
MAP1LC3B-205ENST00000564638 TULP4Q9NRJ4 1543 aa10.09□□□□□ -0.79
MAP1LC3B-205ENST00000564638 DDX17Q92841 729 aaKnown RBP10.09□□□□□ -0.79
MAP1LC3B-205ENST00000564638 CDK19Q9BWU1 502 aa10.09□□□□□ -0.79
MAP1LC3B-205ENST00000564638 MYOM1P52179 1685 aa10.09□□□□□ -0.79
MAP1LC3B-205ENST00000564638 USP32Q8NFA0 1604 aa10.08□□□□□ -0.8
MAP1LC3B-205ENST00000564638 SRPK2P78362 688 aaKnown RBP10.08□□□□□ -0.8
MAP1LC3B-205ENST00000564638 HNRNPUQ00839 825 aaKnown RBP eCLIP10.08□□□□□ -0.8
MAP1LC3B-205ENST00000564638 CDCA8Q53HL2 280 aa10.08□□□□□ -0.8
MAP1LC3B-205ENST00000564638 AFF2P51816 1311 aa10.07□□□□□ -0.8
MAP1LC3B-205ENST00000564638 ANKARQ7Z5J8 1434 aa10.07□□□□□ -0.8
MAP1LC3B-205ENST00000564638 NHSL1Q5SYE7 1610 aa10.07□□□□□ -0.8
MAP1LC3B-205ENST00000564638 AHDC1Q5TGY3 1603 aaPredicted RBP10.07□□□□□ -0.8
MAP1LC3B-205ENST00000564638 ITSN1Q15811 1721 aa10.07□□□□□ -0.8
MAP1LC3B-205ENST00000564638 KIF1AQ12756 1690 aa10.07□□□□□ -0.8
MAP1LC3B-205ENST00000564638 RALBP1Q15311 655 aa10.07□□□□□ -0.8
MAP1LC3B-205ENST00000564638 NCBP3Q53F19 620 aaKnown RBP10.07□□□□□ -0.8
MAP1LC3B-205ENST00000564638 PMFBP1Q8TBY8 1022 aa10.07□□□□□ -0.8
MAP1LC3B-205ENST00000564638 EVC2Q86UK5 1308 aa10.07□□□□□ -0.8
MAP1LC3B-205ENST00000564638 PRR36Q9H6K5 1346 aa10.07□□□□□ -0.8
MAP1LC3B-205ENST00000564638 FOXO3O43524 673 aa10.06□□□□□ -0.8
MAP1LC3B-205ENST00000564638 SLC24A1O60721 1099 aa10.06□□□□□ -0.8
MAP1LC3B-205ENST00000564638 XPCQ01831 940 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms