RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CDC42BPAQ5VT25 1732 aa9.58□□□□□ -0.88
TCF4-216ENST00000562680 C1orf141Q5JVX7 400 aa9.58□□□□□ -0.88
TCF4-216ENST00000562680 SMC4Q9NTJ3 1288 aa9.58□□□□□ -0.88
TCF4-216ENST00000562680 DDRGK1Q96HY6 314 aa9.57□□□□□ -0.88
TCF4-216ENST00000562680 RSPH6AQ9H0K4 717 aa9.57□□□□□ -0.88
TCF4-216ENST00000562680 DMRT2Q9Y5R5 561 aa9.57□□□□□ -0.88
TCF4-216ENST00000562680 HSP90AA1P07900 732 aaKnown RBP9.57□□□□□ -0.88
TCF4-216ENST00000562680 WASLO00401 505 aaPredicted RBP9.57□□□□□ -0.88
TCF4-216ENST00000562680 LTV1Q96GA3 475 aaPredicted RBP9.57□□□□□ -0.88
TCF4-216ENST00000562680 NSD3Q9BZ95 1437 aa9.57□□□□□ -0.88
TCF4-216ENST00000562680 PMFBP1Q8TBY8 1022 aa9.57□□□□□ -0.88
TCF4-216ENST00000562680 RWDD1Q9H446 243 aaPredicted RBP9.57□□□□□ -0.88
TCF4-216ENST00000562680 ABCA9Q8IUA7 1624 aa9.56□□□□□ -0.88
TCF4-216ENST00000562680 GNAI1P63096 354 aa9.56□□□□□ -0.88
TCF4-216ENST00000562680 AAMPQ13685 434 aa9.56□□□□□ -0.88
TCF4-216ENST00000562680 ESCO1Q5FWF5 840 aa9.56□□□□□ -0.88
TCF4-216ENST00000562680 AMOTL2Q9Y2J4 779 aa9.56□□□□□ -0.88
TCF4-216ENST00000562680 SMG6Q86US8 1419 aaKnown RBP9.56□□□□□ -0.88
TCF4-216ENST00000562680 CEBPAP49715 358 aaPredicted RBP9.56□□□□□ -0.88
TCF4-216ENST00000562680 TEFQ10587 303 aa9.55□□□□□ -0.88
TCF4-216ENST00000562680 ABTB2Q8N961 1025 aa9.55□□□□□ -0.88
TCF4-216ENST00000562680 BECN1Q14457 450 aa9.55□□□□□ -0.88
TCF4-216ENST00000562680 GAS2L2Q8NHY3 880 aa9.55□□□□□ -0.88
TCF4-216ENST00000562680 PNISRQ8TF01 805 aaKnown RBP9.55□□□□□ -0.88
TCF4-216ENST00000562680 NAP1L5Q96NT1 182 aaPredicted RBP9.55□□□□□ -0.88
TCF4-216ENST00000562680 RIPK4P57078 832 aa9.54□□□□□ -0.88
TCF4-216ENST00000562680 AEBP2Q6ZN18 517 aaPredicted RBP9.54□□□□□ -0.88
TCF4-216ENST00000562680 HMMRO75330 724 aa9.54□□□□□ -0.88
TCF4-216ENST00000562680 EVA1CP58658 441 aa9.54□□□□□ -0.88
TCF4-216ENST00000562680 KCNH5Q8NCM2 988 aa9.54□□□□□ -0.88
TCF4-216ENST00000562680 RAPGEF4Q8WZA2 1011 aa9.54□□□□□ -0.88
TCF4-216ENST00000562680 NPATQ14207 1427 aa9.53□□□□□ -0.88
TCF4-216ENST00000562680 TAF7LQ5H9L4 462 aa9.53□□□□□ -0.88
TCF4-216ENST00000562680 TBX22Q9Y458 520 aa9.53□□□□□ -0.88
TCF4-216ENST00000562680 YEATS2Q9ULM3 1422 aa9.53□□□□□ -0.88
TCF4-216ENST00000562680 ZKSCAN2Q63HK3 967 aa9.53□□□□□ -0.88
TCF4-216ENST00000562680 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
TCF4-216ENST00000562680 TRPM2O94759 1503 aa9.53□□□□□ -0.88
TCF4-216ENST00000562680 RRP7AQ9Y3A4 280 aaKnown RBP9.53□□□□□ -0.88
TCF4-216ENST00000562680 CT47B1P0C2W7 299 aaPredicted RBP9.52□□□□□ -0.88
TCF4-216ENST00000562680 OS9Q13438 667 aaPredicted RBP9.52□□□□□ -0.88
TCF4-216ENST00000562680 ANKRD36BQ8N2N9 1353 aa9.52□□□□□ -0.89
TCF4-216ENST00000562680 ITPRIPQ8IWB1 547 aa9.52□□□□□ -0.89
TCF4-216ENST00000562680 API5Q9BZZ5 524 aaKnown RBP9.52□□□□□ -0.89
TCF4-216ENST00000562680 KIF16BQ96L93 1317 aa9.52□□□□□ -0.89
TCF4-216ENST00000562680 WAPLQ7Z5K2 1190 aa9.52□□□□□ -0.89
TCF4-216ENST00000562680 LRPPRCP42704 1394 aaKnown RBP9.52□□□□□ -0.89
TCF4-216ENST00000562680 B4GALNT3Q6L9W6 998 aa9.52□□□□□ -0.89
TCF4-216ENST00000562680 RRP1P56182 461 aaKnown RBP9.51□□□□□ -0.89
TCF4-216ENST00000562680 PTPRTO14522 1441 aa9.51□□□□□ -0.89
TCF4-216ENST00000562680 ARHGAP31Q2M1Z3 1444 aa9.51□□□□□ -0.89
TCF4-216ENST00000562680 CCDC9Q9Y3X0 531 aaKnown RBP9.51□□□□□ -0.89
TCF4-216ENST00000562680 C11orf95C9JLR9 678 aaPredicted RBP9.51□□□□□ -0.89
TCF4-216ENST00000562680 TCP11L2Q8N4U5 519 aa9.51□□□□□ -0.89
TCF4-216ENST00000562680 TULP1O00294 542 aaPredicted RBP9.51□□□□□ -0.89
TCF4-216ENST00000562680 PHF8Q9UPP1 1060 aa9.51□□□□□ -0.89
TCF4-216ENST00000562680 DISP3Q9P2K9 1392 aa9.51□□□□□ -0.89
TCF4-216ENST00000562680 FCHSD2O94868 740 aa9.51□□□□□ -0.89
TCF4-216ENST00000562680 TCERG1O14776 1098 aaKnown RBP9.5□□□□□ -0.89
TCF4-216ENST00000562680 PLEKHO1Q53GL0 409 aaPredicted RBP9.5□□□□□ -0.89
TCF4-216ENST00000562680 WDR63Q8IWG1 891 aa9.5□□□□□ -0.89
TCF4-216ENST00000562680 TET3O43151 1660 aa9.5□□□□□ -0.89
TCF4-216ENST00000562680 SIRT1Q96EB6 747 aa9.5□□□□□ -0.89
TCF4-216ENST00000562680 TTC21AQ8NDW8 1320 aa9.5□□□□□ -0.89
TCF4-216ENST00000562680 YTHDC2Q9H6S0 1430 aaKnown RBP9.49□□□□□ -0.89
TCF4-216ENST00000562680 CADPS2Q86UW7 1296 aa9.49□□□□□ -0.89
TCF4-216ENST00000562680 IQGAP3Q86VI3 1631 aa9.49□□□□□ -0.89
TCF4-216ENST00000562680 MYOM2P54296 1465 aa9.49□□□□□ -0.89
TCF4-216ENST00000562680 TESK2Q96S53 571 aa9.49□□□□□ -0.89
TCF4-216ENST00000562680 ABCC11Q96J66 1382 aa9.49□□□□□ -0.89
TCF4-216ENST00000562680 SBNO2Q9Y2G9 1366 aa9.49□□□□□ -0.89
TCF4-216ENST00000562680 COL17A1Q9UMD9 1497 aaPredicted RBP9.49□□□□□ -0.89
TCF4-216ENST00000562680 RGS3P49796 1198 aa9.49□□□□□ -0.89
TCF4-216ENST00000562680 TTC5Q8N0Z6 440 aa9.49□□□□□ -0.89
TCF4-216ENST00000562680 ZNF428Q96B54 188 aa9.49□□□□□ -0.89
TCF4-216ENST00000562680 PRKAR2BP31323 418 aa9.49□□□□□ -0.89
TCF4-216ENST00000562680 TSHZ2Q9NRE2 1034 aa9.49□□□□□ -0.89
TCF4-216ENST00000562680 CROCC2H7BZ55 1655 aa9.48□□□□□ -0.89
TCF4-216ENST00000562680 UNC13BO14795 1591 aa9.48□□□□□ -0.89
TCF4-216ENST00000562680 ASXL1Q8IXJ9 1541 aa9.48□□□□□ -0.89
TCF4-216ENST00000562680 NPC1L1Q9UHC9 1359 aa9.48□□□□□ -0.89
TCF4-216ENST00000562680 NLRP2Q9NX02 1062 aa9.48□□□□□ -0.89
TCF4-216ENST00000562680 DDX19BQ9UMR2 479 aa9.48□□□□□ -0.89
TCF4-216ENST00000562680 TMEM2Q9UHN6 1383 aa9.48□□□□□ -0.89
TCF4-216ENST00000562680 NPHP1O15259 732 aa9.47□□□□□ -0.89
TCF4-216ENST00000562680 CDC42BPBQ9Y5S2 1711 aa9.47□□□□□ -0.89
TCF4-216ENST00000562680 HMOX1P09601 288 aa9.47□□□□□ -0.89
TCF4-216ENST00000562680 TRIM44Q96DX7 344 aaPredicted RBP9.47□□□□□ -0.89
TCF4-216ENST00000562680 SPATA31E1Q6ZUB1 1445 aa9.47□□□□□ -0.89
TCF4-216ENST00000562680 TTC21BQ7Z4L5 1316 aa9.47□□□□□ -0.89
TCF4-216ENST00000562680 HSP90AA2PQ14568 343 aaPredicted RBP9.47□□□□□ -0.89
TCF4-216ENST00000562680 NLRP1Q9C000 1473 aa9.46□□□□□ -0.89
TCF4-216ENST00000562680 DDX58O95786 925 aaKnown RBP9.46□□□□□ -0.89
TCF4-216ENST00000562680 CENPQQ7L2Z9 268 aaPredicted RBP9.46□□□□□ -0.89
TCF4-216ENST00000562680 EFCAB6Q5THR3 1501 aa9.46□□□□□ -0.89
TCF4-216ENST00000562680 ABCC3O15438 1527 aa9.46□□□□□ -0.89
TCF4-216ENST00000562680 TSPYL4Q9UJ04 414 aa9.46□□□□□ -0.9
TCF4-216ENST00000562680 TATP17735 454 aaPredicted RBP9.46□□□□□ -0.9
TCF4-216ENST00000562680 PTMSP20962 102 aa9.46□□□□□ -0.9
TCF4-216ENST00000562680 GLI2P10070 1586 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms