RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 MTMR2Q13614 643 aa9.08□□□□□ -0.96
CNOT1-203ENST00000562046 NUTM2DQ5VT03 806 aaPredicted RBP9.08□□□□□ -0.96
CNOT1-203ENST00000562046 THSD4Q6ZMP0 1018 aa9.08□□□□□ -0.96
CNOT1-203ENST00000562046 NUTM2AQ8IVF1 878 aaPredicted RBP9.08□□□□□ -0.96
CNOT1-203ENST00000562046 SLC27A5Q9Y2P5 690 aa9.08□□□□□ -0.96
CNOT1-203ENST00000562046 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
CNOT1-203ENST00000562046 A6NJR5 290 aa9.06□□□□□ -0.96
CNOT1-203ENST00000562046 MTMR14Q8NCE2 650 aa9.06□□□□□ -0.96
CNOT1-203ENST00000562046 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
CNOT1-203ENST00000562046 CFAP99D6REC4 459 aa9.05□□□□□ -0.96
CNOT1-203ENST00000562046 SOCS7O14512 581 aa9.05□□□□□ -0.96
CNOT1-203ENST00000562046 CLUAP1Q96AJ1 413 aa9.05□□□□□ -0.96
CNOT1-203ENST00000562046 C6orf229H3BNL8 230 aa9.04□□□□□ -0.96
CNOT1-203ENST00000562046 AP1G2O75843 785 aa9.04□□□□□ -0.96
CNOT1-203ENST00000562046 UBTFP17480 764 aaKnown RBP9.04□□□□□ -0.96
CNOT1-203ENST00000562046 KCTD12Q96CX2 325 aaKnown RBP9.04□□□□□ -0.96
CNOT1-203ENST00000562046 POM121Q96HA1 1249 aa9.04□□□□□ -0.96
CNOT1-203ENST00000562046 USP17L8P0C7I0 530 aa9.03□□□□□ -0.96
CNOT1-203ENST00000562046 BLOC1S3Q6QNY0 202 aa9.03□□□□□ -0.96
CNOT1-203ENST00000562046 THAP11Q96EK4 314 aa9.03□□□□□ -0.96
CNOT1-203ENST00000562046 SALL2Q9Y467 1007 aaPredicted RBP9.03□□□□□ -0.96
CNOT1-203ENST00000562046 SUPT5HO00267 1087 aaKnown RBP9.02□□□□□ -0.97
CNOT1-203ENST00000562046 CTDSPL2Q05D32 466 aa9.02□□□□□ -0.97
CNOT1-203ENST00000562046 Q3C1V9 767 aa9.02□□□□□ -0.97
CNOT1-203ENST00000562046 BRICD5Q6PL45 260 aa9.02□□□□□ -0.97
CNOT1-203ENST00000562046 RNF19BQ6ZMZ0 732 aa9.02□□□□□ -0.97
CNOT1-203ENST00000562046 RETREG3Q86VR2 466 aa9.02□□□□□ -0.97
CNOT1-203ENST00000562046 SCUBE3Q8IX30 993 aa9.02□□□□□ -0.97
CNOT1-203ENST00000562046 COG6Q9Y2V7 657 aa9.02□□□□□ -0.97
CNOT1-203ENST00000562046 PCDHB3Q9Y5E6 796 aa9.02□□□□□ -0.97
CNOT1-203ENST00000562046 PRR7Q8TB68 274 aa9.01□□□□□ -0.97
CNOT1-203ENST00000562046 FNBP4Q8N3X1 1017 aaPredicted RBP9□□□□□ -0.97
CNOT1-203ENST00000562046 GJD4Q96KN9 370 aaPredicted RBP9□□□□□ -0.97
CNOT1-203ENST00000562046 NR1I2O75469 434 aa8.99□□□□□ -0.97
CNOT1-203ENST00000562046 NYAP1Q6ZVC0 841 aa8.99□□□□□ -0.97
CNOT1-203ENST00000562046 HELBQ8NG08 1087 aaPredicted RBP8.99□□□□□ -0.97
CNOT1-203ENST00000562046 TRAK2O60296 914 aa8.98□□□□□ -0.97
CNOT1-203ENST00000562046 DESI1Q6ICB0 168 aa8.98□□□□□ -0.97
CNOT1-203ENST00000562046 HMX1Q9NP08 348 aaPredicted RBP8.98□□□□□ -0.97
CNOT1-203ENST00000562046 LRRN4Q8WUT4 740 aa8.97□□□□□ -0.97
CNOT1-203ENST00000562046 USB1Q9BQ65 265 aaKnown RBP8.97□□□□□ -0.97
CNOT1-203ENST00000562046 TRIM34Q9BYJ4 488 aa8.97□□□□□ -0.97
CNOT1-203ENST00000562046 PER1O15534 1290 aaPredicted RBP8.96□□□□□ -0.98
CNOT1-203ENST00000562046 RAD21O60216 631 aa8.96□□□□□ -0.98
CNOT1-203ENST00000562046 GPR37L1O60883 481 aa8.96□□□□□ -0.98
CNOT1-203ENST00000562046 FMNL1O95466 1100 aaPredicted RBP8.96□□□□□ -0.98
CNOT1-203ENST00000562046 PROSER2Q86WR7 435 aaPredicted RBP8.96□□□□□ -0.98
CNOT1-203ENST00000562046 C1orf115Q9H7X2 142 aa8.96□□□□□ -0.98
CNOT1-203ENST00000562046 TSC1Q92574 1164 aa8.95□□□□□ -0.98
CNOT1-203ENST00000562046 GDPD2Q9HCC8 539 aa8.95□□□□□ -0.98
CNOT1-203ENST00000562046 MYT1LQ9UL68 1186 aa8.95□□□□□ -0.98
CNOT1-203ENST00000562046 PTPN5P54829 565 aa8.94□□□□□ -0.98
CNOT1-203ENST00000562046 COPS2P61201 443 aa8.94□□□□□ -0.98
CNOT1-203ENST00000562046 LYPD8Q6UX82 237 aa8.94□□□□□ -0.98
CNOT1-203ENST00000562046 TBC1D2BQ9UPU7 963 aa8.94□□□□□ -0.98
CNOT1-203ENST00000562046 APBB1O00213 710 aa8.93□□□□□ -0.98
CNOT1-203ENST00000562046 TJAP1Q5JTD0 557 aa8.93□□□□□ -0.98
CNOT1-203ENST00000562046 FAM160A2Q8N612 972 aaPredicted RBP8.93□□□□□ -0.98
CNOT1-203ENST00000562046 EPS8L1Q8TE68 723 aa8.93□□□□□ -0.98
CNOT1-203ENST00000562046 MSS51Q4VC12 460 aa8.92□□□□□ -0.98
CNOT1-203ENST00000562046 MTRQ99707 1265 aa8.92□□□□□ -0.98
CNOT1-203ENST00000562046 ZPR1O75312 459 aa8.91□□□□□ -0.98
CNOT1-203ENST00000562046 JUNDP17535 347 aa8.91□□□□□ -0.98
CNOT1-203ENST00000562046 SPSB2Q99619 263 aa8.91□□□□□ -0.98
CNOT1-203ENST00000562046 PCDH10Q9P2E7 1040 aa8.91□□□□□ -0.98
CNOT1-203ENST00000562046 ARID3CA6NKF2 412 aa8.9□□□□□ -0.98
CNOT1-203ENST00000562046 IRF5Q13568 498 aa8.9□□□□□ -0.98
CNOT1-203ENST00000562046 NDUFB9Q9Y6M9 179 aa8.9□□□□□ -0.98
CNOT1-203ENST00000562046 TLL1O43897 1013 aa8.89□□□□□ -0.99
CNOT1-203ENST00000562046 DXOO77932 396 aaKnown RBP8.89□□□□□ -0.99
CNOT1-203ENST00000562046 F12P00748 615 aaPredicted RBP8.89□□□□□ -0.99
CNOT1-203ENST00000562046 MMP16P51512 607 aa8.89□□□□□ -0.99
CNOT1-203ENST00000562046 NR6A1Q15406 480 aa8.89□□□□□ -0.99
CNOT1-203ENST00000562046 SPNS2Q8IVW8 549 aa8.89□□□□□ -0.99
CNOT1-203ENST00000562046 ZNF516Q92618 1163 aa8.89□□□□□ -0.99
CNOT1-203ENST00000562046 PRM3Q9NNZ6 103 aa8.89□□□□□ -0.99
CNOT1-203ENST00000562046 ADH1BP00325 375 aa8.88□□□□□ -0.99
CNOT1-203ENST00000562046 ABL2P42684 1182 aa8.88□□□□□ -0.99
CNOT1-203ENST00000562046 PTPRNQ16849 979 aa8.88□□□□□ -0.99
CNOT1-203ENST00000562046 IL21Q9HBE4 155 aa8.88□□□□□ -0.99
CNOT1-203ENST00000562046 PRDM9Q9NQV7 894 aa8.87□□□□□ -0.99
CNOT1-203ENST00000562046 ZNF777Q9ULD5 760 aaPredicted RBP8.87□□□□□ -0.99
CNOT1-203ENST00000562046 ZNF330Q9Y3S2 320 aaPredicted RBP8.86□□□□□ -0.99
CNOT1-203ENST00000562046 RNF166Q96A37 237 aaPredicted RBP8.84□□□□□ -0.99
CNOT1-203ENST00000562046 EVA1BQ9NVM1 165 aa8.84□□□□□ -0.99
CNOT1-203ENST00000562046 MAP10Q9P2G4 905 aa8.84□□□□□ -0.99
CNOT1-203ENST00000562046 POM121CA8CG34 1229 aa8.83□□□□□ -1
CNOT1-203ENST00000562046 NKX2-3Q8TAU0 364 aa8.83□□□□□ -1
CNOT1-203ENST00000562046 PLSCR2Q9NRY7 297 aa8.83□□□□□ -1
CNOT1-203ENST00000562046 HCSTQ9UBK5 93 aa8.83□□□□□ -1
CNOT1-203ENST00000562046 CCNYL3P0C7X3 344 aa8.82□□□□□ -1
CNOT1-203ENST00000562046 WWC1Q8IX03 1113 aa8.82□□□□□ -1
CNOT1-203ENST00000562046 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
CNOT1-203ENST00000562046 ITGBL1O95965 494 aaPredicted RBP8.81□□□□□ -1
CNOT1-203ENST00000562046 KCNH2Q12809 1159 aa8.81□□□□□ -1
CNOT1-203ENST00000562046 WASHC4Q2M389 1173 aa8.81□□□□□ -1
CNOT1-203ENST00000562046 SLC6A16Q9GZN6 736 aa8.81□□□□□ -1
CNOT1-203ENST00000562046 FKBPLQ9UIM3 349 aa8.8□□□□□ -1
CNOT1-203ENST00000562046 CCDC82Q8N4S0 544 aa8.79□□□□□ -1
CNOT1-203ENST00000562046 ADAMTS19Q8TE59 1207 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms