RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 RGPD8O14715 1765 aaPredicted RBP10.34□□□□□ -0.75
SPG11-224ENST00000561268 ARHGEF28Q8N1W1 1705 aaKnown RBP10.33□□□□□ -0.76
SPG11-224ENST00000561268 KIAA1210Q9ULL0 1709 aa10.33□□□□□ -0.76
SPG11-224ENST00000561268 RAB3GAP2Q9H2M9 1393 aa10.33□□□□□ -0.76
SPG11-224ENST00000561268 ADGRB1O14514 1584 aa10.32□□□□□ -0.76
SPG11-224ENST00000561268 ANKRD30BQ9BXX2 1392 aa10.32□□□□□ -0.76
SPG11-224ENST00000561268 NUTM2DQ5VT03 806 aaPredicted RBP10.32□□□□□ -0.76
SPG11-224ENST00000561268 ABCA3Q99758 1704 aa10.32□□□□□ -0.76
SPG11-224ENST00000561268 LRP6O75581 1613 aa10.32□□□□□ -0.76
SPG11-224ENST00000561268 POLA2Q14181 598 aa10.31□□□□□ -0.76
SPG11-224ENST00000561268 AMOTL2Q9Y2J4 779 aa10.31□□□□□ -0.76
SPG11-224ENST00000561268 DLC1Q96QB1 1528 aa10.31□□□□□ -0.76
SPG11-224ENST00000561268 ROBO2Q9HCK4 1378 aa10.3□□□□□ -0.76
SPG11-224ENST00000561268 RBM33Q96EV2 1170 aaKnown RBP10.3□□□□□ -0.76
SPG11-224ENST00000561268 C19orf44Q9H6X5 657 aa10.3□□□□□ -0.76
SPG11-224ENST00000561268 USP32Q8NFA0 1604 aa10.29□□□□□ -0.76
SPG11-224ENST00000561268 JCADQ9P266 1359 aa10.29□□□□□ -0.76
SPG11-224ENST00000561268 CADPS2Q86UW7 1296 aa10.29□□□□□ -0.76
SPG11-224ENST00000561268 TRIM52Q96A61 297 aa10.29□□□□□ -0.76
SPG11-224ENST00000561268 MPHOSPH9Q99550 1183 aa10.29□□□□□ -0.76
SPG11-224ENST00000561268 SLAIN2Q9P270 581 aa10.29□□□□□ -0.76
SPG11-224ENST00000561268 ITSN1Q15811 1721 aa10.28□□□□□ -0.76
SPG11-224ENST00000561268 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.28□□□□□ -0.76
SPG11-224ENST00000561268 SOCS7O14512 581 aa10.28□□□□□ -0.76
SPG11-224ENST00000561268 VGFO15240 615 aaPredicted RBP10.28□□□□□ -0.76
SPG11-224ENST00000561268 ZNF326Q5BKZ1 582 aaKnown RBP10.28□□□□□ -0.76
SPG11-224ENST00000561268 BCANQ96GW7 911 aa10.28□□□□□ -0.76
SPG11-224ENST00000561268 C1orf167Q5SNV9 1468 aa10.28□□□□□ -0.76
SPG11-224ENST00000561268 CRYBG1Q9Y4K1 1723 aa10.27□□□□□ -0.76
SPG11-224ENST00000561268 LRPPRCP42704 1394 aaKnown RBP10.26□□□□□ -0.77
SPG11-224ENST00000561268 TOPAZ1Q8N9V7 1692 aa10.26□□□□□ -0.77
SPG11-224ENST00000561268 BRINP3Q76B58 766 aa10.26□□□□□ -0.77
SPG11-224ENST00000561268 TRPM3Q9HCF6 1732 aaPredicted RBP10.26□□□□□ -0.77
SPG11-224ENST00000561268 ADGRF5Q8IZF2 1346 aa10.26□□□□□ -0.77
SPG11-224ENST00000561268 ABCC11Q96J66 1382 aa10.26□□□□□ -0.77
SPG11-224ENST00000561268 YTHDC2Q9H6S0 1430 aaKnown RBP10.25□□□□□ -0.77
SPG11-224ENST00000561268 PXDNQ92626 1479 aa10.25□□□□□ -0.77
SPG11-224ENST00000561268 MYCNP04198 464 aaPredicted RBP10.24□□□□□ -0.77
SPG11-224ENST00000561268 RGS17Q9UGC6 210 aaPredicted RBP10.24□□□□□ -0.77
SPG11-224ENST00000561268 SPATA31A6Q5VVP1 1343 aa10.24□□□□□ -0.77
SPG11-224ENST00000561268 ALS2Q96Q42 1657 aa10.24□□□□□ -0.77
SPG11-224ENST00000561268 ATF3P18847 181 aa10.23□□□□□ -0.77
SPG11-224ENST00000561268 PNPLA6Q8IY17 1366 aa10.22□□□□□ -0.77
SPG11-224ENST00000561268 CDK12Q9NYV4 1490 aaPredicted RBP10.21□□□□□ -0.78
SPG11-224ENST00000561268 TRPM1Q7Z4N2 1603 aa10.21□□□□□ -0.78
SPG11-224ENST00000561268 NWD2Q9ULI1 1742 aa10.21□□□□□ -0.78
SPG11-224ENST00000561268 PLCH1Q4KWH8 1693 aa10.2□□□□□ -0.78
SPG11-224ENST00000561268 C14orf37Q86TY3 774 aa10.2□□□□□ -0.78
SPG11-224ENST00000561268 TULP4Q9NRJ4 1543 aa10.19□□□□□ -0.78
SPG11-224ENST00000561268 PLEKHH1Q9ULM0 1364 aa10.19□□□□□ -0.78
SPG11-224ENST00000561268 SOS2Q07890 1332 aaPredicted RBP10.19□□□□□ -0.78
SPG11-224ENST00000561268 TRIM26Q12899 539 aaPredicted RBP10.19□□□□□ -0.78
SPG11-224ENST00000561268 SP7Q8TDD2 431 aaPredicted RBP10.19□□□□□ -0.78
SPG11-224ENST00000561268 ANKARQ7Z5J8 1434 aa10.18□□□□□ -0.78
SPG11-224ENST00000561268 DHX57Q6P158 1386 aaKnown RBP10.18□□□□□ -0.78
SPG11-224ENST00000561268 SIRT1Q96EB6 747 aa10.18□□□□□ -0.78
SPG11-224ENST00000561268 C14orf93Q9H972 538 aaKnown RBP10.18□□□□□ -0.78
SPG11-224ENST00000561268 NRAPQ86VF7 1730 aa10.18□□□□□ -0.78
SPG11-224ENST00000561268 QRICH2Q9H0J4 1663 aa10.18□□□□□ -0.78
SPG11-224ENST00000561268 PHRF1Q9P1Y6 1649 aaKnown RBP10.16□□□□□ -0.78
SPG11-224ENST00000561268 ZEB1P37275 1124 aaPredicted RBP10.15□□□□□ -0.78
SPG11-224ENST00000561268 RGL3Q3MIN7 710 aa10.15□□□□□ -0.78
SPG11-224ENST00000561268 POTEAQ6S8J7 498 aa10.15□□□□□ -0.78
SPG11-224ENST00000561268 STAC3Q96MF2 364 aa10.15□□□□□ -0.78
SPG11-224ENST00000561268 ATP7BP35670 1465 aa10.15□□□□□ -0.78
SPG11-224ENST00000561268 NPHP3Q7Z494 1330 aa10.13□□□□□ -0.79
SPG11-224ENST00000561268 BRWD3Q6RI45 1802 aa10.13□□□□□ -0.79
SPG11-224ENST00000561268 AKAP12Q02952 1782 aa10.12□□□□□ -0.79
SPG11-224ENST00000561268 CFAP70Q5T0N1 1121 aa10.12□□□□□ -0.79
SPG11-224ENST00000561268 TMEM132EQ6IEE7 984 aa10.12□□□□□ -0.79
SPG11-224ENST00000561268 LRRC59Q96AG4 307 aaKnown RBP10.12□□□□□ -0.79
SPG11-224ENST00000561268 AKT1S1Q96B36 256 aa10.12□□□□□ -0.79
SPG11-224ENST00000561268 ORAI2Q96SN7 254 aa10.12□□□□□ -0.79
SPG11-224ENST00000561268 TNS3Q68CZ2 1445 aa10.12□□□□□ -0.79
SPG11-224ENST00000561268 GLI3P10071 1580 aa10.11□□□□□ -0.79
SPG11-224ENST00000561268 WAPLQ7Z5K2 1190 aa10.11□□□□□ -0.79
SPG11-224ENST00000561268 DDX17Q92841 729 aaKnown RBP10.11□□□□□ -0.79
SPG11-224ENST00000561268 PCGF6Q9BYE7 350 aa10.11□□□□□ -0.79
SPG11-224ENST00000561268 NRKQ7Z2Y5 1582 aa10.1□□□□□ -0.79
SPG11-224ENST00000561268 RGS12O14924 1447 aa10.1□□□□□ -0.79
SPG11-224ENST00000561268 USP54Q70EL1 1684 aa10.1□□□□□ -0.79
SPG11-224ENST00000561268 SLIT2O94813 1529 aa10.1□□□□□ -0.79
SPG11-224ENST00000561268 COL14A1Q05707 1796 aaKnown RBP10.1□□□□□ -0.79
SPG11-224ENST00000561268 EIF3AQ14152 1382 aaKnown RBP10.1□□□□□ -0.79
SPG11-224ENST00000561268 ATRNO75882 1429 aa10.09□□□□□ -0.79
SPG11-224ENST00000561268 SBNO1A3KN83 1393 aa10.09□□□□□ -0.79
SPG11-224ENST00000561268 MON2Q7Z3U7 1717 aa10.08□□□□□ -0.8
SPG11-224ENST00000561268 ZNF772Q68DY9 489 aaPredicted RBP10.08□□□□□ -0.8
SPG11-224ENST00000561268 WNK3Q9BYP7 1800 aa10.07□□□□□ -0.8
SPG11-224ENST00000561268 LMO7Q8WWI1 1683 aa10.07□□□□□ -0.8
SPG11-224ENST00000561268 BCL9LQ86UU0 1499 aa10.07□□□□□ -0.8
SPG11-224ENST00000561268 STK26Q9P289 416 aa10.07□□□□□ -0.8
SPG11-224ENST00000561268 AFF2P51816 1311 aa10.07□□□□□ -0.8
SPG11-224ENST00000561268 SPATA31A3Q5VYP0 1347 aa10.07□□□□□ -0.8
SPG11-224ENST00000561268 PIP4P2Q8N4L2 257 aa10.06□□□□□ -0.8
SPG11-224ENST00000561268 PRAM1Q96QH2 718 aa10.06□□□□□ -0.8
SPG11-224ENST00000561268 ZBTB12Q9Y330 459 aaPredicted RBP10.06□□□□□ -0.8
SPG11-224ENST00000561268 PRR36Q9H6K5 1346 aa10.06□□□□□ -0.8
SPG11-224ENST00000561268 THSD7AQ9UPZ6 1657 aa10.06□□□□□ -0.8
SPG11-224ENST00000561268 ESCO1Q5FWF5 840 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms