RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 FECHP22830 423 aa4.37□□□□□ -1.71
RNF111-211ENST00000560952 LCE2CQ5TA81 110 aa4.37□□□□□ -1.71
RNF111-211ENST00000560952 ARXQ96QS3 562 aa4.37□□□□□ -1.71
RNF111-211ENST00000560952 CLCN1P35523 988 aa4.36□□□□□ -1.71
RNF111-211ENST00000560952 GMPRP36959 345 aa4.36□□□□□ -1.71
RNF111-211ENST00000560952 LAMC2Q13753 1193 aa4.36□□□□□ -1.71
RNF111-211ENST00000560952 SENP2Q9HC62 589 aa4.36□□□□□ -1.71
RNF111-211ENST00000560952 CTC1Q2NKJ3 1217 aa4.36□□□□□ -1.71
RNF111-211ENST00000560952 CCDC102AQ96A19 550 aa4.36□□□□□ -1.71
RNF111-211ENST00000560952 IL21Q9HBE4 155 aa4.36□□□□□ -1.71
RNF111-211ENST00000560952 ACTN4O43707 911 aaKnown RBP4.35□□□□□ -1.71
RNF111-211ENST00000560952 FAM161AQ3B820 660 aa4.35□□□□□ -1.71
RNF111-211ENST00000560952 GRIPAP1Q4V328 841 aa4.35□□□□□ -1.71
RNF111-211ENST00000560952 RDH13Q8NBN7 331 aa4.35□□□□□ -1.71
RNF111-211ENST00000560952 PPP1R18Q6NYC8 613 aa4.34□□□□□ -1.71
RNF111-211ENST00000560952 AK7Q96M32 723 aa4.34□□□□□ -1.71
RNF111-211ENST00000560952 KRTAP4-5Q9BYR2 181 aa4.34□□□□□ -1.71
RNF111-211ENST00000560952 GPCPD1Q9NPB8 672 aa4.34□□□□□ -1.71
RNF111-211ENST00000560952 GMPR2Q9P2T1 348 aaKnown RBP4.34□□□□□ -1.71
RNF111-211ENST00000560952 CFHP08603 1231 aa4.34□□□□□ -1.71
RNF111-211ENST00000560952 PCDHB3Q9Y5E6 796 aa4.34□□□□□ -1.71
RNF111-211ENST00000560952 DDX11L8A8MPP1 907 aa4.33□□□□□ -1.72
RNF111-211ENST00000560952 NR1I2O75469 434 aa4.33□□□□□ -1.72
RNF111-211ENST00000560952 TMUB1Q9BVT8 246 aa4.33□□□□□ -1.72
RNF111-211ENST00000560952 TIMELESSQ9UNS1 1208 aa4.33□□□□□ -1.72
RNF111-211ENST00000560952 APLP1P51693 650 aa4.33□□□□□ -1.72
RNF111-211ENST00000560952 MTRQ99707 1265 aa4.33□□□□□ -1.72
RNF111-211ENST00000560952 USP46P62068 366 aa4.32□□□□□ -1.72
RNF111-211ENST00000560952 AMHR2Q16671 573 aa4.32□□□□□ -1.72
RNF111-211ENST00000560952 ST8SIA5O15466 376 aa4.31□□□□□ -1.72
RNF111-211ENST00000560952 SLC10A3P09131 477 aa4.31□□□□□ -1.72
RNF111-211ENST00000560952 MDM2Q00987 491 aaPredicted RBP4.31□□□□□ -1.72
RNF111-211ENST00000560952 TJAP1Q5JTD0 557 aa4.31□□□□□ -1.72
RNF111-211ENST00000560952 KANK3Q6NY19 840 aa4.31□□□□□ -1.72
RNF111-211ENST00000560952 KIFC2Q96AC6 838 aa4.31□□□□□ -1.72
RNF111-211ENST00000560952 CD46P15529 392 aa4.31□□□□□ -1.72
RNF111-211ENST00000560952 GCGRP47871 477 aa4.31□□□□□ -1.72
RNF111-211ENST00000560952 TTLL12Q14166 644 aaPredicted RBP4.31□□□□□ -1.72
RNF111-211ENST00000560952 DIXDC1Q155Q3 683 aa4.31□□□□□ -1.72
RNF111-211ENST00000560952 TRIM67Q6ZTA4 783 aa4.31□□□□□ -1.72
RNF111-211ENST00000560952 ATP6V1AP38606 617 aa4.3□□□□□ -1.72
RNF111-211ENST00000560952 PHOX2BQ99453 314 aa4.3□□□□□ -1.72
RNF111-211ENST00000560952 ZPR1O75312 459 aa4.3□□□□□ -1.72
RNF111-211ENST00000560952 YBX3P16989 372 aaKnown RBP eCLIP4.3□□□□□ -1.72
RNF111-211ENST00000560952 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
RNF111-211ENST00000560952 FAM217BQ9NTX9 383 aaPredicted RBP4.3□□□□□ -1.72
RNF111-211ENST00000560952 RANGAP1P46060 587 aaPredicted RBP4.29□□□□□ -1.72
RNF111-211ENST00000560952 SMCPP49901 116 aaPredicted RBP4.29□□□□□ -1.72
RNF111-211ENST00000560952 Q3C1V9 767 aa4.29□□□□□ -1.72
RNF111-211ENST00000560952 K7ELQ4 463 aaPredicted RBP4.28□□□□□ -1.72
RNF111-211ENST00000560952 MSTNO14793 375 aa4.28□□□□□ -1.72
RNF111-211ENST00000560952 TRIM66O15016 1216 aa4.28□□□□□ -1.72
RNF111-211ENST00000560952 AXIN1O15169 862 aa4.28□□□□□ -1.72
RNF111-211ENST00000560952 KDM4AO75164 1064 aa4.28□□□□□ -1.72
RNF111-211ENST00000560952 COPS2P61201 443 aa4.28□□□□□ -1.72
RNF111-211ENST00000560952 BLOC1S3Q6QNY0 202 aa4.28□□□□□ -1.72
RNF111-211ENST00000560952 NUTM1Q86Y26 1132 aa4.28□□□□□ -1.72
RNF111-211ENST00000560952 SALL2Q9Y467 1007 aaPredicted RBP4.28□□□□□ -1.72
RNF111-211ENST00000560952 FMNL1O95466 1100 aaPredicted RBP4.28□□□□□ -1.72
RNF111-211ENST00000560952 ZNF598Q86UK7 904 aaKnown RBP4.28□□□□□ -1.72
RNF111-211ENST00000560952 ADH1BP00325 375 aa4.27□□□□□ -1.73
RNF111-211ENST00000560952 SSTR3P32745 418 aaPredicted RBP4.27□□□□□ -1.73
RNF111-211ENST00000560952 SLC24A3Q9HC58 644 aa4.27□□□□□ -1.73
RNF111-211ENST00000560952 AVPP01185 164 aa4.27□□□□□ -1.73
RNF111-211ENST00000560952 FUT2Q10981 343 aa4.27□□□□□ -1.73
RNF111-211ENST00000560952 MORN1Q5T089 497 aa4.27□□□□□ -1.73
RNF111-211ENST00000560952 GIGYF2Q6Y7W6 1299 aaKnown RBP4.27□□□□□ -1.73
RNF111-211ENST00000560952 NLRP7Q8WX94 980 aa4.27□□□□□ -1.73
RNF111-211ENST00000560952 PDE4DQ08499 809 aa4.26□□□□□ -1.73
RNF111-211ENST00000560952 SCUBE3Q8IX30 993 aa4.26□□□□□ -1.73
RNF111-211ENST00000560952 ZNF516Q92618 1163 aa4.25□□□□□ -1.73
RNF111-211ENST00000560952 GJA5P36382 358 aa4.25□□□□□ -1.73
RNF111-211ENST00000560952 PARP9Q8IXQ6 854 aa4.25□□□□□ -1.73
RNF111-211ENST00000560952 SPSB2Q99619 263 aa4.25□□□□□ -1.73
RNF111-211ENST00000560952 SLC6A16Q9GZN6 736 aa4.25□□□□□ -1.73
RNF111-211ENST00000560952 NXF1Q9UBU9 619 aaKnown RBP4.25□□□□□ -1.73
RNF111-211ENST00000560952 HOXA2O43364 376 aa4.24□□□□□ -1.73
RNF111-211ENST00000560952 SLURP2P0DP57 97 aa4.24□□□□□ -1.73
RNF111-211ENST00000560952 SLC19A1P41440 591 aa4.24□□□□□ -1.73
RNF111-211ENST00000560952 PUS10Q3MIT2 529 aaKnown RBP4.24□□□□□ -1.73
RNF111-211ENST00000560952 MSS51Q4VC12 460 aa4.24□□□□□ -1.73
RNF111-211ENST00000560952 HOMEZQ8IX15 550 aa4.24□□□□□ -1.73
RNF111-211ENST00000560952 BEGAINQ9BUH8 593 aa4.24□□□□□ -1.73
RNF111-211ENST00000560952 RSPH6AQ9H0K4 717 aa4.24□□□□□ -1.73
RNF111-211ENST00000560952 SLC27A5Q9Y2P5 690 aa4.24□□□□□ -1.73
RNF111-211ENST00000560952 SPDYE5A6NIY4 337 aa4.23□□□□□ -1.73
RNF111-211ENST00000560952 ANKLE1Q8NAG6 615 aa4.23□□□□□ -1.73
RNF111-211ENST00000560952 TRIM47Q96LD4 638 aa4.23□□□□□ -1.73
RNF111-211ENST00000560952 EIF5BO60841 1220 aaKnown RBP4.22□□□□□ -1.73
RNF111-211ENST00000560952 BRICD5Q6PL45 260 aa4.22□□□□□ -1.73
RNF111-211ENST00000560952 SPIRE2Q8WWL2 714 aa4.22□□□□□ -1.73
RNF111-211ENST00000560952 THAP11Q96EK4 314 aa4.22□□□□□ -1.73
RNF111-211ENST00000560952 REPIN1Q9BWE0 567 aaKnown RBP4.22□□□□□ -1.73
RNF111-211ENST00000560952 FDX1P10109 184 aa4.22□□□□□ -1.73
RNF111-211ENST00000560952 NKX2-3Q8TAU0 364 aa4.22□□□□□ -1.73
RNF111-211ENST00000560952 DDRGK1Q96HY6 314 aa4.22□□□□□ -1.73
RNF111-211ENST00000560952 USB1Q9BQ65 265 aaKnown RBP4.22□□□□□ -1.73
RNF111-211ENST00000560952 TLL1O43897 1013 aa4.21□□□□□ -1.74
RNF111-211ENST00000560952 TUSC1Q2TAM9 212 aa4.21□□□□□ -1.74
RNF111-211ENST00000560952 RETREG3Q86VR2 466 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms