RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 CADPS2Q86UW7 1296 aa24.18■■□□□ 1.46
RPL28-209ENST00000560055 NBPF8Q3BBV2 869 aa24.17■■□□□ 1.46
RPL28-209ENST00000560055 TRPM1Q7Z4N2 1603 aa24.17■■□□□ 1.46
RPL28-209ENST00000560055 ATF3P18847 181 aa24.16■■□□□ 1.46
RPL28-209ENST00000560055 SLAIN2Q9P270 581 aa24.15■■□□□ 1.46
RPL28-209ENST00000560055 TRAK1Q9UPV9 953 aa24.15■■□□□ 1.46
RPL28-209ENST00000560055 PRAM1Q96QH2 718 aa24.14■■□□□ 1.45
RPL28-209ENST00000560055 TIMELESSQ9UNS1 1208 aa24.13■■□□□ 1.45
RPL28-209ENST00000560055 MST1RQ04912 1400 aa24.12■■□□□ 1.45
RPL28-209ENST00000560055 CDC42BPGQ6DT37 1551 aa24.12■■□□□ 1.45
RPL28-209ENST00000560055 ROBO1Q9Y6N7 1651 aa24.11■■□□□ 1.45
RPL28-209ENST00000560055 SOCS7O14512 581 aa24.11■■□□□ 1.45
RPL28-209ENST00000560055 ARHGEF28Q8N1W1 1705 aaKnown RBP24.1■■□□□ 1.45
RPL28-209ENST00000560055 GPRASP1Q5JY77 1395 aa24.1■■□□□ 1.45
RPL28-209ENST00000560055 RALGAPBQ86X10 1494 aa24.09■■□□□ 1.45
RPL28-209ENST00000560055 ROCK2O75116 1388 aaKnown RBP24.09■■□□□ 1.45
RPL28-209ENST00000560055 POGKQ9P215 609 aa24.08■■□□□ 1.45
RPL28-209ENST00000560055 SAFB2Q14151 953 aaKnown RBP eCLIP24.06■■□□□ 1.44
RPL28-209ENST00000560055 ADGRB2O60241 1585 aa24.05■■□□□ 1.44
RPL28-209ENST00000560055 C1orf167Q5SNV9 1468 aa24.05■■□□□ 1.44
RPL28-209ENST00000560055 BRINP3Q76B58 766 aa24.02■■□□□ 1.44
RPL28-209ENST00000560055 PHF23Q9BUL5 403 aaPredicted RBP24.01■■□□□ 1.43
RPL28-209ENST00000560055 FMN2Q9NZ56 1722 aa24■■□□□ 1.43
RPL28-209ENST00000560055 MINK1Q8N4C8 1332 aaPredicted RBP23.99■■□□□ 1.43
RPL28-209ENST00000560055 CENPJQ9HC77 1338 aaPredicted RBP23.98■■□□□ 1.43
RPL28-209ENST00000560055 PHLPP1O60346 1717 aa23.97■■□□□ 1.43
RPL28-209ENST00000560055 HIRIP3Q9BW71 556 aaPredicted RBP23.97■■□□□ 1.43
RPL28-209ENST00000560055 CARD11Q9BXL7 1154 aa23.97■■□□□ 1.43
RPL28-209ENST00000560055 AHDC1Q5TGY3 1603 aaPredicted RBP23.95■■□□□ 1.43
RPL28-209ENST00000560055 ORAI2Q96SN7 254 aa23.95■■□□□ 1.42
RPL28-209ENST00000560055 EIF3AQ14152 1382 aaKnown RBP23.94■■□□□ 1.42
RPL28-209ENST00000560055 WASLO00401 505 aaPredicted RBP23.94■■□□□ 1.42
RPL28-209ENST00000560055 ANKARQ7Z5J8 1434 aa23.93■■□□□ 1.42
RPL28-209ENST00000560055 NUTM2FA1L443 756 aa23.92■■□□□ 1.42
RPL28-209ENST00000560055 RGS17Q9UGC6 210 aaPredicted RBP23.92■■□□□ 1.42
RPL28-209ENST00000560055 QRICH2Q9H0J4 1663 aa23.92■■□□□ 1.42
RPL28-209ENST00000560055 NHSL1Q5SYE7 1610 aa23.92■■□□□ 1.42
RPL28-209ENST00000560055 TULP4Q9NRJ4 1543 aa23.91■■□□□ 1.42
RPL28-209ENST00000560055 USP32Q8NFA0 1604 aa23.91■■□□□ 1.42
RPL28-209ENST00000560055 ESCO1Q5FWF5 840 aa23.9■■□□□ 1.42
RPL28-209ENST00000560055 COL16A1Q07092 1604 aaPredicted RBP23.9■■□□□ 1.42
RPL28-209ENST00000560055 PRR36Q9H6K5 1346 aa23.89■■□□□ 1.42
RPL28-209ENST00000560055 SBNO2Q9Y2G9 1366 aa23.89■■□□□ 1.41
RPL28-209ENST00000560055 CDK19Q9BWU1 502 aa23.87■■□□□ 1.41
RPL28-209ENST00000560055 ATP7BP35670 1465 aa23.87■■□□□ 1.41
RPL28-209ENST00000560055 DDX17Q92841 729 aaKnown RBP23.86■■□□□ 1.41
RPL28-209ENST00000560055 RGPD8O14715 1765 aaPredicted RBP23.86■■□□□ 1.41
RPL28-209ENST00000560055 KIF1AQ12756 1690 aa23.84■■□□□ 1.41
RPL28-209ENST00000560055 SOS2Q07890 1332 aaPredicted RBP23.84■■□□□ 1.41
RPL28-209ENST00000560055 JCADQ9P266 1359 aa23.83■■□□□ 1.41
RPL28-209ENST00000560055 PHF8Q9UPP1 1060 aa23.83■■□□□ 1.41
RPL28-209ENST00000560055 NUDT16Q96DE0 195 aaKnown RBP23.82■■□□□ 1.4
RPL28-209ENST00000560055 NPHP3Q7Z494 1330 aa23.82■■□□□ 1.4
RPL28-209ENST00000560055 USP47Q96K76 1375 aa23.81■■□□□ 1.4
RPL28-209ENST00000560055 FOXO3O43524 673 aa23.81■■□□□ 1.4
RPL28-209ENST00000560055 EVC2Q86UK5 1308 aa23.81■■□□□ 1.4
RPL28-209ENST00000560055 PXDNQ92626 1479 aa23.81■■□□□ 1.4
RPL28-209ENST00000560055 ST20-MTHFSA0A0A6YYL1 179 aa23.79■■□□□ 1.4
RPL28-209ENST00000560055 TESK2Q96S53 571 aa23.79■■□□□ 1.4
RPL28-209ENST00000560055 POTEAQ6S8J7 498 aa23.78■■□□□ 1.4
RPL28-209ENST00000560055 CABP2Q9NPB3 220 aa23.78■■□□□ 1.4
RPL28-209ENST00000560055 CCDC61Q9Y6R9 512 aa23.78■■□□□ 1.4
RPL28-209ENST00000560055 TOPAZ1Q8N9V7 1692 aa23.78■■□□□ 1.4
RPL28-209ENST00000560055 ITSN1Q15811 1721 aa23.77■■□□□ 1.4
RPL28-209ENST00000560055 SRPK2P78362 688 aaKnown RBP23.77■■□□□ 1.4
RPL28-209ENST00000560055 PMFBP1Q8TBY8 1022 aa23.76■■□□□ 1.39
RPL28-209ENST00000560055 LRRC59Q96AG4 307 aaKnown RBP23.76■■□□□ 1.39
RPL28-209ENST00000560055 LRP6O75581 1613 aa23.76■■□□□ 1.39
RPL28-209ENST00000560055 SHPRHQ149N8 1683 aa23.74■■□□□ 1.39
RPL28-209ENST00000560055 PLEKHG3A1L390 1219 aa23.74■■□□□ 1.39
RPL28-209ENST00000560055 XPCQ01831 940 aaPredicted RBP23.73■■□□□ 1.39
RPL28-209ENST00000560055 POLR3AO14802 1390 aaPredicted RBP23.73■■□□□ 1.39
RPL28-209ENST00000560055 KRT28Q7Z3Y7 464 aa23.72■■□□□ 1.39
RPL28-209ENST00000560055 PNPLA6Q8IY17 1366 aa23.72■■□□□ 1.39
RPL28-209ENST00000560055 PPIP5K1Q6PFW1 1433 aa23.71■■□□□ 1.39
RPL28-209ENST00000560055 SPATA31A6Q5VVP1 1343 aa23.7■■□□□ 1.38
RPL28-209ENST00000560055 SLC24A1O60721 1099 aa23.7■■□□□ 1.38
RPL28-209ENST00000560055 SBNO1A3KN83 1393 aa23.69■■□□□ 1.38
RPL28-209ENST00000560055 ATAD2Q6PL18 1390 aa23.69■■□□□ 1.38
RPL28-209ENST00000560055 PSME1Q06323 249 aa23.69■■□□□ 1.38
RPL28-209ENST00000560055 NGDNQ8NEJ9 315 aaKnown RBP23.69■■□□□ 1.38
RPL28-209ENST00000560055 SPATA31A3Q5VYP0 1347 aa23.68■■□□□ 1.38
RPL28-209ENST00000560055 PUS7Q96PZ0 661 aaKnown RBP23.68■■□□□ 1.38
RPL28-209ENST00000560055 ACEP12821 1306 aa23.67■■□□□ 1.38
RPL28-209ENST00000560055 TRPM3Q9HCF6 1732 aaPredicted RBP23.67■■□□□ 1.38
RPL28-209ENST00000560055 NUTM2BA6NNL0 878 aaPredicted RBP23.66■■□□□ 1.38
RPL28-209ENST00000560055 NUTM2EB1AL46 878 aaPredicted RBP23.66■■□□□ 1.38
RPL28-209ENST00000560055 MEX3CQ5U5Q3 659 aaKnown RBP23.66■■□□□ 1.38
RPL28-209ENST00000560055 NUTM2AQ8IVF1 878 aaPredicted RBP23.66■■□□□ 1.38
RPL28-209ENST00000560055 CABP1Q9NZU7 370 aa23.66■■□□□ 1.38
RPL28-209ENST00000560055 TNS3Q68CZ2 1445 aa23.66■■□□□ 1.38
RPL28-209ENST00000560055 COL22A1Q8NFW1 1626 aaPredicted RBP23.65■■□□□ 1.38
RPL28-209ENST00000560055 EIF4G2P78344 907 aaKnown RBP eCLIP23.64■■□□□ 1.37
RPL28-209ENST00000560055 TMF1P82094 1093 aa23.62■■□□□ 1.37
RPL28-209ENST00000560055 HSPA5P11021 654 aaKnown RBP23.61■■□□□ 1.37
RPL28-209ENST00000560055 ARHGEF10O15013 1369 aa23.6■■□□□ 1.37
RPL28-209ENST00000560055 ALS2Q96Q42 1657 aa23.6■■□□□ 1.37
RPL28-209ENST00000560055 CPSF1Q10570 1443 aaKnown RBP23.59■■□□□ 1.37
RPL28-209ENST00000560055 BRD4O60885 1362 aaPredicted RBP23.58■■□□□ 1.37
RPL28-209ENST00000560055 USP6P35125 1406 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms