RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SBNO2Q9Y2G9 1366 aa17.31■□□□□ 0.36
TPM1-209ENST00000558072 CENPJQ9HC77 1338 aaPredicted RBP17.31■□□□□ 0.36
TPM1-209ENST00000558072 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
TPM1-209ENST00000558072 POGKQ9P215 609 aa17.31■□□□□ 0.36
TPM1-209ENST00000558072 FAM135BQ49AJ0 1406 aa17.3■□□□□ 0.36
TPM1-209ENST00000558072 TMF1P82094 1093 aa17.3■□□□□ 0.36
TPM1-209ENST00000558072 TMEM94Q12767 1356 aa17.29■□□□□ 0.36
TPM1-209ENST00000558072 MINK1Q8N4C8 1332 aaPredicted RBP17.29■□□□□ 0.36
TPM1-209ENST00000558072 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
TPM1-209ENST00000558072 TULP4Q9NRJ4 1543 aa17.27■□□□□ 0.36
TPM1-209ENST00000558072 PUS7Q96PZ0 661 aaKnown RBP17.26■□□□□ 0.35
TPM1-209ENST00000558072 ADGRB2O60241 1585 aa17.23■□□□□ 0.35
TPM1-209ENST00000558072 EVC2Q86UK5 1308 aa17.23■□□□□ 0.35
TPM1-209ENST00000558072 ADGRL3Q9HAR2 1447 aa17.23■□□□□ 0.35
TPM1-209ENST00000558072 C14orf37Q86TY3 774 aa17.23■□□□□ 0.35
TPM1-209ENST00000558072 TESK2Q96S53 571 aa17.23■□□□□ 0.35
TPM1-209ENST00000558072 FMN2Q9NZ56 1722 aa17.22■□□□□ 0.35
TPM1-209ENST00000558072 NUTM2FA1L443 756 aa17.22■□□□□ 0.35
TPM1-209ENST00000558072 DISP3Q9P2K9 1392 aa17.22■□□□□ 0.35
TPM1-209ENST00000558072 USP32Q8NFA0 1604 aa17.21■□□□□ 0.35
TPM1-209ENST00000558072 CDC42BPGQ6DT37 1551 aa17.21■□□□□ 0.35
TPM1-209ENST00000558072 RGPD8O14715 1765 aaPredicted RBP17.2■□□□□ 0.34
TPM1-209ENST00000558072 NCOA3Q9Y6Q9 1424 aa17.2■□□□□ 0.34
TPM1-209ENST00000558072 C11orf95C9JLR9 678 aaPredicted RBP17.18■□□□□ 0.34
TPM1-209ENST00000558072 CCDC7Q96M83 1385 aa17.17■□□□□ 0.34
TPM1-209ENST00000558072 CABP2Q9NPB3 220 aa17.16■□□□□ 0.34
TPM1-209ENST00000558072 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
TPM1-209ENST00000558072 MYOM1P52179 1685 aa17.15■□□□□ 0.34
TPM1-209ENST00000558072 TOPAZ1Q8N9V7 1692 aa17.15■□□□□ 0.34
TPM1-209ENST00000558072 KIF7Q2M1P5 1343 aa17.15■□□□□ 0.34
TPM1-209ENST00000558072 MSH6P52701 1360 aa17.15■□□□□ 0.34
TPM1-209ENST00000558072 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
TPM1-209ENST00000558072 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
TPM1-209ENST00000558072 ATP7BP35670 1465 aa17.14■□□□□ 0.33
TPM1-209ENST00000558072 POLR3GLQ9BT43 218 aa17.14■□□□□ 0.33
TPM1-209ENST00000558072 WASHC2AQ641Q2 1341 aa17.14■□□□□ 0.33
TPM1-209ENST00000558072 MST1RQ04912 1400 aa17.13■□□□□ 0.33
TPM1-209ENST00000558072 WASLO00401 505 aaPredicted RBP17.13■□□□□ 0.33
TPM1-209ENST00000558072 SRPK2P78362 688 aaKnown RBP17.13■□□□□ 0.33
TPM1-209ENST00000558072 CERKQ8TCT0 537 aa17.13■□□□□ 0.33
TPM1-209ENST00000558072 CDK19Q9BWU1 502 aa17.13■□□□□ 0.33
TPM1-209ENST00000558072 C19orf44Q9H6X5 657 aa17.1■□□□□ 0.33
TPM1-209ENST00000558072 C1orf167Q5SNV9 1468 aa17.1■□□□□ 0.33
TPM1-209ENST00000558072 DCCP43146 1447 aa17.09■□□□□ 0.33
TPM1-209ENST00000558072 ITSN1Q15811 1721 aa17.08■□□□□ 0.32
TPM1-209ENST00000558072 ROBO1Q9Y6N7 1651 aa17.07■□□□□ 0.32
TPM1-209ENST00000558072 ATF3P18847 181 aa17.07■□□□□ 0.32
TPM1-209ENST00000558072 ORAI2Q96SN7 254 aa17.07■□□□□ 0.32
TPM1-209ENST00000558072 DDX10Q13206 875 aaKnown RBP17.06■□□□□ 0.32
TPM1-209ENST00000558072 DDX17Q92841 729 aaKnown RBP17.06■□□□□ 0.32
TPM1-209ENST00000558072 CCDC61Q9Y6R9 512 aa17.06■□□□□ 0.32
TPM1-209ENST00000558072 PPIP5K1Q6PFW1 1433 aa17.05■□□□□ 0.32
TPM1-209ENST00000558072 ANKARQ7Z5J8 1434 aa17.05■□□□□ 0.32
TPM1-209ENST00000558072 CADPS2Q86UW7 1296 aa17.05■□□□□ 0.32
TPM1-209ENST00000558072 PMFBP1Q8TBY8 1022 aa17.05■□□□□ 0.32
TPM1-209ENST00000558072 NUDT16Q96DE0 195 aaKnown RBP17.05■□□□□ 0.32
TPM1-209ENST00000558072 TERF2IPQ9NYB0 399 aa17.05■□□□□ 0.32
TPM1-209ENST00000558072 IQSEC2Q5JU85 1478 aa17.05■□□□□ 0.32
TPM1-209ENST00000558072 SCAF1Q9H7N4 1312 aaKnown RBP17.04■□□□□ 0.32
TPM1-209ENST00000558072 UBAP1LF5GYI3 381 aa17.04■□□□□ 0.32
TPM1-209ENST00000558072 PIP4K2BP78356 416 aa17.04■□□□□ 0.32
TPM1-209ENST00000558072 DIEXFQ68CQ4 756 aaKnown RBP17.04■□□□□ 0.32
TPM1-209ENST00000558072 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
TPM1-209ENST00000558072 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
TPM1-209ENST00000558072 CD163L1Q9NR16 1453 aa17.02■□□□□ 0.32
TPM1-209ENST00000558072 XPCQ01831 940 aaPredicted RBP17.02■□□□□ 0.32
TPM1-209ENST00000558072 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
TPM1-209ENST00000558072 AKAP12Q02952 1782 aa17.02■□□□□ 0.31
TPM1-209ENST00000558072 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
TPM1-209ENST00000558072 ESCO1Q5FWF5 840 aa17.01■□□□□ 0.31
TPM1-209ENST00000558072 SLC12A5Q9H2X9 1139 aa17.01■□□□□ 0.31
TPM1-209ENST00000558072 SLAIN2Q9P270 581 aa17.01■□□□□ 0.31
TPM1-209ENST00000558072 BRINP3Q76B58 766 aa17■□□□□ 0.31
TPM1-209ENST00000558072 CABP1Q9NZU7 370 aa17■□□□□ 0.31
TPM1-209ENST00000558072 NHSL1Q5SYE7 1610 aa16.99■□□□□ 0.31
TPM1-209ENST00000558072 PLEKHG3A1L390 1219 aa16.99■□□□□ 0.31
TPM1-209ENST00000558072 KNSTRNQ9Y448 316 aa16.99■□□□□ 0.31
TPM1-209ENST00000558072 ANKRD36BQ8N2N9 1353 aa16.99■□□□□ 0.31
TPM1-209ENST00000558072 MON2Q7Z3U7 1717 aa16.99■□□□□ 0.31
TPM1-209ENST00000558072 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
TPM1-209ENST00000558072 PANK3Q9H999 370 aa16.98■□□□□ 0.31
TPM1-209ENST00000558072 PHF8Q9UPP1 1060 aa16.98■□□□□ 0.31
TPM1-209ENST00000558072 A0A1W2PP64 1363 aa16.97■□□□□ 0.31
TPM1-209ENST00000558072 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.31
TPM1-209ENST00000558072 ANP32CO43423 234 aa16.96■□□□□ 0.31
TPM1-209ENST00000558072 BRD4O60885 1362 aaPredicted RBP16.96■□□□□ 0.31
TPM1-209ENST00000558072 KTN1Q86UP2 1357 aaKnown RBP16.96■□□□□ 0.31
TPM1-209ENST00000558072 PHLPP1O60346 1717 aa16.96■□□□□ 0.3
TPM1-209ENST00000558072 ACEP12821 1306 aa16.96■□□□□ 0.3
TPM1-209ENST00000558072 FOXO3O43524 673 aa16.95■□□□□ 0.3
TPM1-209ENST00000558072 PXDNQ92626 1479 aa16.94■□□□□ 0.3
TPM1-209ENST00000558072 TOM1O60784 492 aa16.94■□□□□ 0.3
TPM1-209ENST00000558072 AHDC1Q5TGY3 1603 aaPredicted RBP16.93■□□□□ 0.3
TPM1-209ENST00000558072 NPC1L1Q9UHC9 1359 aa16.93■□□□□ 0.3
TPM1-209ENST00000558072 NGDNQ8NEJ9 315 aaKnown RBP16.93■□□□□ 0.3
TPM1-209ENST00000558072 COL16A1Q07092 1604 aaPredicted RBP16.92■□□□□ 0.3
TPM1-209ENST00000558072 POLR3AO14802 1390 aaPredicted RBP16.92■□□□□ 0.3
TPM1-209ENST00000558072 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
TPM1-209ENST00000558072 CPSF1Q10570 1443 aaKnown RBP16.92■□□□□ 0.3
TPM1-209ENST00000558072 CGNL1Q0VF96 1302 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms