RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 MCM6Q14566 821 aa6.86□□□□□ -1.31
SRP54-209ENST00000555746 CABLES1Q8TDN4 633 aa6.86□□□□□ -1.31
SRP54-209ENST00000555746 KCTD12Q96CX2 325 aaKnown RBP6.86□□□□□ -1.31
SRP54-209ENST00000555746 SLC27A5Q9Y2P5 690 aa6.86□□□□□ -1.31
SRP54-209ENST00000555746 SALL2Q9Y467 1007 aaPredicted RBP6.86□□□□□ -1.31
SRP54-209ENST00000555746 NUTM2BA6NNL0 878 aaPredicted RBP6.85□□□□□ -1.31
SRP54-209ENST00000555746 NUTM2EB1AL46 878 aaPredicted RBP6.85□□□□□ -1.31
SRP54-209ENST00000555746 PUS10Q3MIT2 529 aaKnown RBP6.85□□□□□ -1.31
SRP54-209ENST00000555746 NUTM2DQ5VT03 806 aaPredicted RBP6.85□□□□□ -1.31
SRP54-209ENST00000555746 NUTM2AQ8IVF1 878 aaPredicted RBP6.85□□□□□ -1.31
SRP54-209ENST00000555746 PCDHB3Q9Y5E6 796 aa6.85□□□□□ -1.31
SRP54-209ENST00000555746 Q3C1V9 767 aa6.84□□□□□ -1.31
SRP54-209ENST00000555746 NR1I2O75469 434 aa6.83□□□□□ -1.32
SRP54-209ENST00000555746 RETREG3Q86VR2 466 aa6.83□□□□□ -1.32
SRP54-209ENST00000555746 SCUBE3Q8IX30 993 aa6.83□□□□□ -1.32
SRP54-209ENST00000555746 ZMYND15Q9H091 742 aa6.83□□□□□ -1.32
SRP54-209ENST00000555746 MYT1LQ9UL68 1186 aa6.83□□□□□ -1.32
SRP54-209ENST00000555746 C6orf229H3BNL8 230 aa6.82□□□□□ -1.32
SRP54-209ENST00000555746 BRICD5Q6PL45 260 aa6.82□□□□□ -1.32
SRP54-209ENST00000555746 BLOC1S3Q6QNY0 202 aa6.82□□□□□ -1.32
SRP54-209ENST00000555746 THAP11Q96EK4 314 aa6.82□□□□□ -1.32
SRP54-209ENST00000555746 CFAP99D6REC4 459 aa6.81□□□□□ -1.32
SRP54-209ENST00000555746 DESI1Q6ICB0 168 aa6.81□□□□□ -1.32
SRP54-209ENST00000555746 RNF19BQ6ZMZ0 732 aa6.81□□□□□ -1.32
SRP54-209ENST00000555746 SYMPKQ92797 1274 aaKnown RBP6.81□□□□□ -1.32
SRP54-209ENST00000555746 SNRKQ9NRH2 765 aa6.81□□□□□ -1.32
SRP54-209ENST00000555746 A6NJR5 290 aa6.8□□□□□ -1.32
SRP54-209ENST00000555746 AP1G2O75843 785 aa6.8□□□□□ -1.32
SRP54-209ENST00000555746 FMNL1O95466 1100 aaPredicted RBP6.8□□□□□ -1.32
SRP54-209ENST00000555746 USP17L8P0C7I0 530 aa6.8□□□□□ -1.32
SRP54-209ENST00000555746 HELBQ8NG08 1087 aaPredicted RBP6.8□□□□□ -1.32
SRP54-209ENST00000555746 PRR7Q8TB68 274 aa6.8□□□□□ -1.32
SRP54-209ENST00000555746 UBTFP17480 764 aaKnown RBP6.79□□□□□ -1.32
SRP54-209ENST00000555746 PTPN5P54829 565 aa6.79□□□□□ -1.32
SRP54-209ENST00000555746 MTMR14Q8NCE2 650 aa6.79□□□□□ -1.32
SRP54-209ENST00000555746 USB1Q9BQ65 265 aaKnown RBP6.79□□□□□ -1.32
SRP54-209ENST00000555746 CTDSPL2Q05D32 466 aa6.78□□□□□ -1.32
SRP54-209ENST00000555746 SPNS2Q8IVW8 549 aa6.78□□□□□ -1.32
SRP54-209ENST00000555746 APBB1O00213 710 aa6.77□□□□□ -1.33
SRP54-209ENST00000555746 ZPR1O75312 459 aa6.77□□□□□ -1.33
SRP54-209ENST00000555746 MSS51Q4VC12 460 aa6.77□□□□□ -1.33
SRP54-209ENST00000555746 TJAP1Q5JTD0 557 aa6.77□□□□□ -1.33
SRP54-209ENST00000555746 COPS2P61201 443 aa6.76□□□□□ -1.33
SRP54-209ENST00000555746 LYPD8Q6UX82 237 aa6.76□□□□□ -1.33
SRP54-209ENST00000555746 RNF166Q96A37 237 aaPredicted RBP6.76□□□□□ -1.33
SRP54-209ENST00000555746 CLUAP1Q96AJ1 413 aa6.76□□□□□ -1.33
SRP54-209ENST00000555746 GJD4Q96KN9 370 aaPredicted RBP6.76□□□□□ -1.33
SRP54-209ENST00000555746 SPSB2Q99619 263 aa6.76□□□□□ -1.33
SRP54-209ENST00000555746 MTRQ99707 1265 aa6.76□□□□□ -1.33
SRP54-209ENST00000555746 IL21Q9HBE4 155 aa6.76□□□□□ -1.33
SRP54-209ENST00000555746 COG6Q9Y2V7 657 aa6.76□□□□□ -1.33
SRP54-209ENST00000555746 FAM160A2Q8N612 972 aaPredicted RBP6.75□□□□□ -1.33
SRP54-209ENST00000555746 HCSTQ9UBK5 93 aa6.75□□□□□ -1.33
SRP54-209ENST00000555746 PER1O15534 1290 aaPredicted RBP6.74□□□□□ -1.33
SRP54-209ENST00000555746 RAD21O60216 631 aa6.74□□□□□ -1.33
SRP54-209ENST00000555746 ADH1BP00325 375 aa6.74□□□□□ -1.33
SRP54-209ENST00000555746 JUNDP17535 347 aa6.74□□□□□ -1.33
SRP54-209ENST00000555746 MMP16P51512 607 aa6.74□□□□□ -1.33
SRP54-209ENST00000555746 FNBP4Q8N3X1 1017 aaPredicted RBP6.74□□□□□ -1.33
SRP54-209ENST00000555746 LRRN4Q8WUT4 740 aa6.74□□□□□ -1.33
SRP54-209ENST00000555746 TSC1Q92574 1164 aa6.74□□□□□ -1.33
SRP54-209ENST00000555746 POM121Q96HA1 1249 aa6.74□□□□□ -1.33
SRP54-209ENST00000555746 TRIM34Q9BYJ4 488 aa6.74□□□□□ -1.33
SRP54-209ENST00000555746 HMX1Q9NP08 348 aaPredicted RBP6.74□□□□□ -1.33
SRP54-209ENST00000555746 DXOO77932 396 aaKnown RBP6.73□□□□□ -1.33
SRP54-209ENST00000555746 PTPRNQ16849 979 aa6.73□□□□□ -1.33
SRP54-209ENST00000555746 PRM3Q9NNZ6 103 aa6.73□□□□□ -1.33
SRP54-209ENST00000555746 TLL1O43897 1013 aa6.72□□□□□ -1.33
SRP54-209ENST00000555746 PROSER2Q86WR7 435 aaPredicted RBP6.72□□□□□ -1.33
SRP54-209ENST00000555746 ZNF516Q92618 1163 aa6.72□□□□□ -1.33
SRP54-209ENST00000555746 NDUFB9Q9Y6M9 179 aa6.72□□□□□ -1.33
SRP54-209ENST00000555746 TRAK2O60296 914 aa6.71□□□□□ -1.34
SRP54-209ENST00000555746 GPR37L1O60883 481 aa6.71□□□□□ -1.34
SRP54-209ENST00000555746 ITGBL1O95965 494 aaPredicted RBP6.71□□□□□ -1.34
SRP54-209ENST00000555746 F12P00748 615 aaPredicted RBP6.71□□□□□ -1.34
SRP54-209ENST00000555746 GDPD2Q9HCC8 539 aa6.71□□□□□ -1.34
SRP54-209ENST00000555746 TBC1D2BQ9UPU7 963 aa6.71□□□□□ -1.34
SRP54-209ENST00000555746 NR6A1Q15406 480 aa6.69□□□□□ -1.34
SRP54-209ENST00000555746 EPS8L1Q8TE68 723 aa6.69□□□□□ -1.34
SRP54-209ENST00000555746 SLC6A16Q9GZN6 736 aa6.69□□□□□ -1.34
SRP54-209ENST00000555746 PRDM9Q9NQV7 894 aa6.69□□□□□ -1.34
SRP54-209ENST00000555746 SUPT5HO00267 1087 aaKnown RBP6.68□□□□□ -1.34
SRP54-209ENST00000555746 CCNYL3P0C7X3 344 aa6.68□□□□□ -1.34
SRP54-209ENST00000555746 KCNC4Q03721 635 aa6.68□□□□□ -1.34
SRP54-209ENST00000555746 MMRN1Q13201 1228 aa6.68□□□□□ -1.34
SRP54-209ENST00000555746 NUDT12Q9BQG2 462 aa6.68□□□□□ -1.34
SRP54-209ENST00000555746 EVA1BQ9NVM1 165 aa6.68□□□□□ -1.34
SRP54-209ENST00000555746 IRF5Q13568 498 aa6.67□□□□□ -1.34
SRP54-209ENST00000555746 WWC1Q8IX03 1113 aa6.67□□□□□ -1.34
SRP54-209ENST00000555746 NKX2-3Q8TAU0 364 aa6.67□□□□□ -1.34
SRP54-209ENST00000555746 ABL2P42684 1182 aa6.66□□□□□ -1.34
SRP54-209ENST00000555746 KCNH2Q12809 1159 aa6.66□□□□□ -1.34
SRP54-209ENST00000555746 PNMA1Q8ND90 353 aa6.66□□□□□ -1.34
SRP54-209ENST00000555746 MAP10Q9P2G4 905 aa6.66□□□□□ -1.34
SRP54-209ENST00000555746 ZC3H4Q9UPT8 1303 aaKnown RBP6.66□□□□□ -1.34
SRP54-209ENST00000555746 WASHC4Q2M389 1173 aa6.65□□□□□ -1.34
SRP54-209ENST00000555746 C1orf115Q9H7X2 142 aa6.65□□□□□ -1.34
SRP54-209ENST00000555746 ZNF330Q9Y3S2 320 aaPredicted RBP6.65□□□□□ -1.34
SRP54-209ENST00000555746 S1PR4O95977 384 aa6.64□□□□□ -1.35
SRP54-209ENST00000555746 GPKOWQ92917 476 aaPredicted RBP eCLIP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms