RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 NUTM2FA1L443 756 aa6.55□□□□□ -1.36
KTN1-220ENST00000555172 CYP4X1Q8N118 509 aa6.55□□□□□ -1.36
KTN1-220ENST00000555172 SNRPBP14678 240 aaKnown RBP6.55□□□□□ -1.36
KTN1-220ENST00000555172 PRDM9Q9NQV7 894 aa6.54□□□□□ -1.36
KTN1-220ENST00000555172 NEUROD2Q15784 382 aa6.53□□□□□ -1.36
KTN1-220ENST00000555172 SLC24A3Q9HC58 644 aa6.53□□□□□ -1.36
KTN1-220ENST00000555172 FAM160A2Q8N612 972 aaPredicted RBP6.53□□□□□ -1.36
KTN1-220ENST00000555172 ZMYND10O75800 440 aa6.52□□□□□ -1.37
KTN1-220ENST00000555172 TTC24A2A3L6 582 aaPredicted RBP6.51□□□□□ -1.37
KTN1-220ENST00000555172 CD2BP2O95400 341 aaKnown RBP6.51□□□□□ -1.37
KTN1-220ENST00000555172 RPIAP49247 311 aa6.51□□□□□ -1.37
KTN1-220ENST00000555172 NLRP7Q8WX94 980 aa6.51□□□□□ -1.37
KTN1-220ENST00000555172 ARID3AQ99856 593 aa6.51□□□□□ -1.37
KTN1-220ENST00000555172 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.51□□□□□ -1.37
KTN1-220ENST00000555172 PXYLP1Q8TE99 480 aa6.51□□□□□ -1.37
KTN1-220ENST00000555172 THAP11Q96EK4 314 aa6.51□□□□□ -1.37
KTN1-220ENST00000555172 FUT2Q10981 343 aa6.5□□□□□ -1.37
KTN1-220ENST00000555172 MORN1Q5T089 497 aa6.5□□□□□ -1.37
KTN1-220ENST00000555172 SMPD1P17405 629 aa6.49□□□□□ -1.37
KTN1-220ENST00000555172 SMCPP49901 116 aaPredicted RBP6.49□□□□□ -1.37
KTN1-220ENST00000555172 CTC1Q2NKJ3 1217 aa6.49□□□□□ -1.37
KTN1-220ENST00000555172 ATP13A2Q9NQ11 1180 aa6.49□□□□□ -1.37
KTN1-220ENST00000555172 SLC27A5Q9Y2P5 690 aa6.49□□□□□ -1.37
KTN1-220ENST00000555172 J3QL48 77 aa6.49□□□□□ -1.37
KTN1-220ENST00000555172 GPIHBP1Q8IV16 184 aa6.49□□□□□ -1.37
KTN1-220ENST00000555172 TERTO14746 1132 aaKnown RBP6.48□□□□□ -1.37
KTN1-220ENST00000555172 BARGINQ6ZT62 677 aa6.48□□□□□ -1.37
KTN1-220ENST00000555172 KRI1Q8N9T8 703 aaKnown RBP6.48□□□□□ -1.37
KTN1-220ENST00000555172 RBM26Q5T8P6 1007 aaKnown RBP6.48□□□□□ -1.37
KTN1-220ENST00000555172 RDH13Q8NBN7 331 aa6.48□□□□□ -1.37
KTN1-220ENST00000555172 FECHP22830 423 aa6.47□□□□□ -1.37
KTN1-220ENST00000555172 METTL3Q86U44 580 aaKnown RBP6.47□□□□□ -1.37
KTN1-220ENST00000555172 FCHSD2O94868 740 aa6.46□□□□□ -1.37
KTN1-220ENST00000555172 AK7Q96M32 723 aa6.46□□□□□ -1.37
KTN1-220ENST00000555172 DDX11L8A8MPP1 907 aa6.46□□□□□ -1.38
KTN1-220ENST00000555172 RNF19BQ6ZMZ0 732 aa6.46□□□□□ -1.38
KTN1-220ENST00000555172 HPS1Q92902 700 aa6.46□□□□□ -1.38
KTN1-220ENST00000555172 LOC105371045A0A1W2PR82 267 aa6.45□□□□□ -1.38
KTN1-220ENST00000555172 FMNL1O95466 1100 aaPredicted RBP6.45□□□□□ -1.38
KTN1-220ENST00000555172 OATP04181 439 aa6.45□□□□□ -1.38
KTN1-220ENST00000555172 MRGPRX2Q96LB1 330 aa6.45□□□□□ -1.38
KTN1-220ENST00000555172 C1orf115Q9H7X2 142 aa6.45□□□□□ -1.38
KTN1-220ENST00000555172 ZBTB24O43167 697 aaPredicted RBP6.44□□□□□ -1.38
KTN1-220ENST00000555172 SNIP1Q8TAD8 396 aaKnown RBP6.44□□□□□ -1.38
KTN1-220ENST00000555172 TRIM47Q96LD4 638 aa6.44□□□□□ -1.38
KTN1-220ENST00000555172 ATP6V1AP38606 617 aa6.44□□□□□ -1.38
KTN1-220ENST00000555172 RSPH4AQ5TD94 716 aa6.44□□□□□ -1.38
KTN1-220ENST00000555172 BRICD5Q6PL45 260 aa6.44□□□□□ -1.38
KTN1-220ENST00000555172 WNT7AO00755 349 aa6.43□□□□□ -1.38
KTN1-220ENST00000555172 TRIM32Q13049 653 aa6.42□□□□□ -1.38
KTN1-220ENST00000555172 ZSCAN1Q8NBB4 408 aa6.42□□□□□ -1.38
KTN1-220ENST00000555172 SLC16A10Q8TF71 515 aa6.42□□□□□ -1.38
KTN1-220ENST00000555172 VEGFBP49765 207 aa6.41□□□□□ -1.38
KTN1-220ENST00000555172 PHOX2BQ99453 314 aa6.41□□□□□ -1.38
KTN1-220ENST00000555172 SENP2Q9HC62 589 aa6.41□□□□□ -1.38
KTN1-220ENST00000555172 LORP23490 312 aaPredicted RBP6.4□□□□□ -1.38
KTN1-220ENST00000555172 GCGRP47871 477 aa6.4□□□□□ -1.38
KTN1-220ENST00000555172 GMPRP36959 345 aa6.4□□□□□ -1.39
KTN1-220ENST00000555172 ZMYND15Q9H091 742 aa6.4□□□□□ -1.39
KTN1-220ENST00000555172 CCDC9Q9Y3X0 531 aaKnown RBP6.4□□□□□ -1.39
KTN1-220ENST00000555172 SKOR1P84550 965 aa6.38□□□□□ -1.39
KTN1-220ENST00000555172 RSPH6AQ9H0K4 717 aa6.38□□□□□ -1.39
KTN1-220ENST00000555172 ARID3CA6NKF2 412 aa6.38□□□□□ -1.39
KTN1-220ENST00000555172 HIC1Q14526 733 aa6.38□□□□□ -1.39
KTN1-220ENST00000555172 MSS51Q4VC12 460 aa6.38□□□□□ -1.39
KTN1-220ENST00000555172 BMP1P13497 986 aa6.37□□□□□ -1.39
KTN1-220ENST00000555172 SALL2Q9Y467 1007 aaPredicted RBP6.37□□□□□ -1.39
KTN1-220ENST00000555172 TRIM66O15016 1216 aa6.37□□□□□ -1.39
KTN1-220ENST00000555172 RC3H1Q5TC82 1133 aaKnown RBP6.37□□□□□ -1.39
KTN1-220ENST00000555172 CCDC24Q8N4L8 307 aa6.37□□□□□ -1.39
KTN1-220ENST00000555172 KIFC2Q96AC6 838 aa6.37□□□□□ -1.39
KTN1-220ENST00000555172 GPBP1L1Q9HC44 474 aaPredicted RBP6.37□□□□□ -1.39
KTN1-220ENST00000555172 PDE4DQ08499 809 aa6.36□□□□□ -1.39
KTN1-220ENST00000555172 HLA-CQ95604 372 aa6.36□□□□□ -1.39
KTN1-220ENST00000555172 MMP16P51512 607 aa6.35□□□□□ -1.39
KTN1-220ENST00000555172 KDM4CQ9H3R0 1056 aa6.35□□□□□ -1.39
KTN1-220ENST00000555172 NXF1Q9UBU9 619 aaKnown RBP6.35□□□□□ -1.39
KTN1-220ENST00000555172 MINK1Q8N4C8 1332 aaPredicted RBP6.35□□□□□ -1.39
KTN1-220ENST00000555172 ZBTB7CA1YPR0 619 aa6.35□□□□□ -1.39
KTN1-220ENST00000555172 GNPATO15228 680 aa6.35□□□□□ -1.39
KTN1-220ENST00000555172 ALDH1A1P00352 501 aa6.35□□□□□ -1.39
KTN1-220ENST00000555172 IL27Q8NEV9 243 aa6.35□□□□□ -1.39
KTN1-220ENST00000555172 ERBB4Q15303 1308 aa6.34□□□□□ -1.39
KTN1-220ENST00000555172 GPR37O15354 613 aa6.34□□□□□ -1.39
KTN1-220ENST00000555172 TRIM46Q7Z4K8 759 aa6.34□□□□□ -1.39
KTN1-220ENST00000555172 MAP2K5Q13163 448 aa6.33□□□□□ -1.4
KTN1-220ENST00000555172 IGSF3O75054 1194 aa6.33□□□□□ -1.4
KTN1-220ENST00000555172 IRF7Q92985 503 aa6.33□□□□□ -1.4
KTN1-220ENST00000555172 DXOO77932 396 aaKnown RBP6.32□□□□□ -1.4
KTN1-220ENST00000555172 SULF1Q8IWU6 871 aa6.31□□□□□ -1.4
KTN1-220ENST00000555172 NPAS3Q8IXF0 933 aa6.31□□□□□ -1.4
KTN1-220ENST00000555172 USB1Q9BQ65 265 aaKnown RBP6.31□□□□□ -1.4
KTN1-220ENST00000555172 IRF6O14896 467 aa6.31□□□□□ -1.4
KTN1-220ENST00000555172 PDIA4P13667 645 aaKnown RBP6.31□□□□□ -1.4
KTN1-220ENST00000555172 REPIN1Q9BWE0 567 aaKnown RBP6.31□□□□□ -1.4
KTN1-220ENST00000555172 SYMPKQ92797 1274 aaKnown RBP6.3□□□□□ -1.4
KTN1-220ENST00000555172 CCDC102AQ96A19 550 aa6.3□□□□□ -1.4
KTN1-220ENST00000555172 TTBK1Q5TCY1 1321 aaPredicted RBP6.3□□□□□ -1.4
KTN1-220ENST00000555172 GUCA2AQ02747 115 aa6.29□□□□□ -1.4
KTN1-220ENST00000555172 KCNMA1Q12791 1236 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms