RNA–Protein interactions for RNA: ENST00000555049.5

CCNK-204, Transcript of cyclin K, humanhuman

TSL 1 (best) BASIC

Gene CCNK, Length 1,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-204ENST00000555049 ASXL1Q8IXJ9 1541 aa13.97□□□□□ -0.17
CCNK-204ENST00000555049 CFAP70Q5T0N1 1121 aa13.97□□□□□ -0.17
CCNK-204ENST00000555049 C14orf93Q9H972 538 aaKnown RBP13.97□□□□□ -0.17
CCNK-204ENST00000555049 XRN1Q8IZH2 1706 aaKnown RBP13.96□□□□□ -0.17
CCNK-204ENST00000555049 RTL5Q5HYW3 569 aaPredicted RBP13.96□□□□□ -0.17
CCNK-204ENST00000555049 TMEM132EQ6IEE7 984 aa13.96□□□□□ -0.17
CCNK-204ENST00000555049 FBXO41Q8TF61 875 aa13.96□□□□□ -0.17
CCNK-204ENST00000555049 L3MBTL2Q969R5 705 aa13.96□□□□□ -0.17
CCNK-204ENST00000555049 XIRP1Q702N8 1843 aaKnown RBP13.96□□□□□ -0.18
CCNK-204ENST00000555049 C11orf95C9JLR9 678 aaPredicted RBP13.94□□□□□ -0.18
CCNK-204ENST00000555049 ILDR1Q86SU0 546 aaPredicted RBP13.94□□□□□ -0.18
CCNK-204ENST00000555049 U3KPZ7 1027 aaPredicted RBP13.94□□□□□ -0.18
CCNK-204ENST00000555049 PPP4R2Q9NY27 417 aa13.93□□□□□ -0.18
CCNK-204ENST00000555049 ROBO2Q9HCK4 1378 aa13.93□□□□□ -0.18
CCNK-204ENST00000555049 UBAP1LF5GYI3 381 aa13.93□□□□□ -0.18
CCNK-204ENST00000555049 STAC3Q96MF2 364 aa13.93□□□□□ -0.18
CCNK-204ENST00000555049 PRAG1Q86YV5 1406 aa13.91□□□□□ -0.18
CCNK-204ENST00000555049 STK26Q9P289 416 aa13.91□□□□□ -0.18
CCNK-204ENST00000555049 ADGRB1O14514 1584 aa13.91□□□□□ -0.18
CCNK-204ENST00000555049 PTCH1Q13635 1447 aa13.91□□□□□ -0.18
CCNK-204ENST00000555049 YTHDC2Q9H6S0 1430 aaKnown RBP13.91□□□□□ -0.18
CCNK-204ENST00000555049 LRPPRCP42704 1394 aaKnown RBP13.9□□□□□ -0.18
CCNK-204ENST00000555049 LAMC1P11047 1609 aa13.9□□□□□ -0.18
CCNK-204ENST00000555049 USP35Q9P2H5 1018 aa13.9□□□□□ -0.19
CCNK-204ENST00000555049 ABCC11Q96J66 1382 aa13.89□□□□□ -0.19
CCNK-204ENST00000555049 TIMELESSQ9UNS1 1208 aa13.89□□□□□ -0.19
CCNK-204ENST00000555049 TECPR2O15040 1411 aa13.89□□□□□ -0.19
CCNK-204ENST00000555049 NCOA3Q9Y6Q9 1424 aa13.89□□□□□ -0.19
CCNK-204ENST00000555049 WASHC2AQ641Q2 1341 aa13.88□□□□□ -0.19
CCNK-204ENST00000555049 MSH6P52701 1360 aa13.87□□□□□ -0.19
CCNK-204ENST00000555049 PLEKHH1Q9ULM0 1364 aa13.87□□□□□ -0.19
CCNK-204ENST00000555049 TOM1O60784 492 aa13.87□□□□□ -0.19
CCNK-204ENST00000555049 NBPF1Q3BBV0 1214 aa13.87□□□□□ -0.19
CCNK-204ENST00000555049 WAPLQ7Z5K2 1190 aa13.87□□□□□ -0.19
CCNK-204ENST00000555049 C14orf37Q86TY3 774 aa13.87□□□□□ -0.19
CCNK-204ENST00000555049 TONSLQ96HA7 1378 aa13.87□□□□□ -0.19
CCNK-204ENST00000555049 ANP32CO43423 234 aa13.86□□□□□ -0.19
CCNK-204ENST00000555049 NPM3O75607 178 aaKnown RBP13.86□□□□□ -0.19
CCNK-204ENST00000555049 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
CCNK-204ENST00000555049 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
CCNK-204ENST00000555049 EIF5BO60841 1220 aaKnown RBP13.86□□□□□ -0.19
CCNK-204ENST00000555049 NBPF8Q3BBV2 869 aa13.86□□□□□ -0.19
CCNK-204ENST00000555049 C19orf44Q9H6X5 657 aa13.86□□□□□ -0.19
CCNK-204ENST00000555049 ADGRL3Q9HAR2 1447 aa13.85□□□□□ -0.19
CCNK-204ENST00000555049 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
CCNK-204ENST00000555049 NALCNQ8IZF0 1738 aa13.84□□□□□ -0.19
CCNK-204ENST00000555049 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.84□□□□□ -0.19
CCNK-204ENST00000555049 TRAK1Q9UPV9 953 aa13.84□□□□□ -0.19
CCNK-204ENST00000555049 SIRT1Q96EB6 747 aa13.82□□□□□ -0.2
CCNK-204ENST00000555049 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
CCNK-204ENST00000555049 PRAM1Q96QH2 718 aa13.82□□□□□ -0.2
CCNK-204ENST00000555049 FAM135BQ49AJ0 1406 aa13.82□□□□□ -0.2
CCNK-204ENST00000555049 KIAA1210Q9ULL0 1709 aa13.82□□□□□ -0.2
CCNK-204ENST00000555049 ANP32AP39687 249 aaKnown RBP13.82□□□□□ -0.2
CCNK-204ENST00000555049 IPO9Q96P70 1041 aaKnown RBP13.82□□□□□ -0.2
CCNK-204ENST00000555049 SLAIN2Q9P270 581 aa13.82□□□□□ -0.2
CCNK-204ENST00000555049 DLC1Q96QB1 1528 aa13.82□□□□□ -0.2
CCNK-204ENST00000555049 ATF3P18847 181 aa13.81□□□□□ -0.2
CCNK-204ENST00000555049 SAFB2Q14151 953 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCNK-204ENST00000555049 CADPS2Q86UW7 1296 aa13.81□□□□□ -0.2
CCNK-204ENST00000555049 PKNOX2Q96KN3 472 aa13.81□□□□□ -0.2
CCNK-204ENST00000555049 DCCP43146 1447 aa13.81□□□□□ -0.2
CCNK-204ENST00000555049 TRPM1Q7Z4N2 1603 aa13.81□□□□□ -0.2
CCNK-204ENST00000555049 NBR1Q14596 966 aa13.8□□□□□ -0.2
CCNK-204ENST00000555049 IL27Q8NEV9 243 aa13.8□□□□□ -0.2
CCNK-204ENST00000555049 MST1RQ04912 1400 aa13.79□□□□□ -0.2
CCNK-204ENST00000555049 HSPA1LP34931 641 aa13.78□□□□□ -0.2
CCNK-204ENST00000555049 POGKQ9P215 609 aa13.78□□□□□ -0.2
CCNK-204ENST00000555049 ROCK2O75116 1388 aaKnown RBP13.77□□□□□ -0.2
CCNK-204ENST00000555049 ROBO1Q9Y6N7 1651 aa13.77□□□□□ -0.2
CCNK-204ENST00000555049 DDX10Q13206 875 aaKnown RBP13.77□□□□□ -0.21
CCNK-204ENST00000555049 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
CCNK-204ENST00000555049 ARHGEF28Q8N1W1 1705 aaKnown RBP13.77□□□□□ -0.21
CCNK-204ENST00000555049 CDC42BPGQ6DT37 1551 aa13.76□□□□□ -0.21
CCNK-204ENST00000555049 GLIPR1L2Q4G1C9 344 aa13.76□□□□□ -0.21
CCNK-204ENST00000555049 HIRIP3Q9BW71 556 aaPredicted RBP13.76□□□□□ -0.21
CCNK-204ENST00000555049 ZBTB47Q9UFB7 747 aaPredicted RBP13.76□□□□□ -0.21
CCNK-204ENST00000555049 GPRASP1Q5JY77 1395 aa13.76□□□□□ -0.21
CCNK-204ENST00000555049 MINK1Q8N4C8 1332 aaPredicted RBP13.76□□□□□ -0.21
CCNK-204ENST00000555049 C1orf167Q5SNV9 1468 aa13.75□□□□□ -0.21
CCNK-204ENST00000555049 RALGAPBQ86X10 1494 aa13.75□□□□□ -0.21
CCNK-204ENST00000555049 PAK3O75914 559 aaPredicted RBP13.75□□□□□ -0.21
CCNK-204ENST00000555049 BRINP3Q76B58 766 aa13.75□□□□□ -0.21
CCNK-204ENST00000555049 NUTM2FA1L443 756 aa13.75□□□□□ -0.21
CCNK-204ENST00000555049 ORAI2Q96SN7 254 aa13.73□□□□□ -0.21
CCNK-204ENST00000555049 ADGRB2O60241 1585 aa13.73□□□□□ -0.21
CCNK-204ENST00000555049 CARD11Q9BXL7 1154 aa13.72□□□□□ -0.21
CCNK-204ENST00000555049 DDX17Q92841 729 aaKnown RBP13.72□□□□□ -0.21
CCNK-204ENST00000555049 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.72□□□□□ -0.21
CCNK-204ENST00000555049 CENPJQ9HC77 1338 aaPredicted RBP13.71□□□□□ -0.21
CCNK-204ENST00000555049 FMN2Q9NZ56 1722 aa13.71□□□□□ -0.21
CCNK-204ENST00000555049 PPM1GO15355 546 aaPredicted RBP13.71□□□□□ -0.22
CCNK-204ENST00000555049 WASLO00401 505 aaPredicted RBP13.69□□□□□ -0.22
CCNK-204ENST00000555049 ESCO1Q5FWF5 840 aa13.69□□□□□ -0.22
CCNK-204ENST00000555049 PRR36Q9H6K5 1346 aa13.69□□□□□ -0.22
CCNK-204ENST00000555049 AHDC1Q5TGY3 1603 aaPredicted RBP13.68□□□□□ -0.22
CCNK-204ENST00000555049 USP32Q8NFA0 1604 aa13.68□□□□□ -0.22
CCNK-204ENST00000555049 CDK19Q9BWU1 502 aa13.67□□□□□ -0.22
CCNK-204ENST00000555049 ZNF219Q9P2Y4 722 aaPredicted RBP13.67□□□□□ -0.22
CCNK-204ENST00000555049 DAXXQ9UER7 740 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms