RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 BCL2L13Q9BXK5 485 aa10.87□□□□□ -0.67
GTF2A1-203ENST00000553612 PANK3Q9H999 370 aa10.87□□□□□ -0.67
GTF2A1-203ENST00000553612 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.87□□□□□ -0.67
GTF2A1-203ENST00000553612 V9GYY5 206 aaPredicted RBP10.87□□□□□ -0.67
GTF2A1-203ENST00000553612 TPM1P09493 284 aa10.86□□□□□ -0.67
GTF2A1-203ENST00000553612 ARGLU1Q9NWB6 273 aaPredicted RBP10.86□□□□□ -0.67
GTF2A1-203ENST00000553612 ATP6V1AP38606 617 aa10.86□□□□□ -0.67
GTF2A1-203ENST00000553612 MAP2K1Q02750 393 aaPredicted RBP10.86□□□□□ -0.67
GTF2A1-203ENST00000553612 CCDC146Q8IYE0 955 aa10.86□□□□□ -0.67
GTF2A1-203ENST00000553612 MICALL1Q8N3F8 863 aa10.86□□□□□ -0.67
GTF2A1-203ENST00000553612 DHX8Q14562 1220 aaKnown RBP10.86□□□□□ -0.67
GTF2A1-203ENST00000553612 CCP110O43303 1012 aa10.86□□□□□ -0.67
GTF2A1-203ENST00000553612 MRFAP1L1Q96HT8 127 aa10.86□□□□□ -0.67
GTF2A1-203ENST00000553612 LRRFIP2Q9Y608 721 aaKnown RBP10.85□□□□□ -0.67
GTF2A1-203ENST00000553612 ZBED9Q6R2W3 1325 aa10.85□□□□□ -0.67
GTF2A1-203ENST00000553612 KDM4AO75164 1064 aa10.85□□□□□ -0.67
GTF2A1-203ENST00000553612 GOPCQ9HD26 462 aa10.85□□□□□ -0.67
GTF2A1-203ENST00000553612 GEMIN8Q9NWZ8 242 aaKnown RBP10.85□□□□□ -0.67
GTF2A1-203ENST00000553612 TMEM132AQ24JP5 1023 aa10.85□□□□□ -0.67
GTF2A1-203ENST00000553612 CREBRFQ8IUR6 639 aa10.85□□□□□ -0.67
GTF2A1-203ENST00000553612 GTF3C6Q969F1 213 aa10.85□□□□□ -0.67
GTF2A1-203ENST00000553612 MRFAP1Q9Y605 127 aa10.85□□□□□ -0.67
GTF2A1-203ENST00000553612 FRMD3A2A2Y4 597 aa10.84□□□□□ -0.67
GTF2A1-203ENST00000553612 NRDCO43847 1150 aa10.83□□□□□ -0.68
GTF2A1-203ENST00000553612 PEX19P40855 299 aa10.83□□□□□ -0.68
GTF2A1-203ENST00000553612 CENPQQ7L2Z9 268 aaPredicted RBP10.83□□□□□ -0.68
GTF2A1-203ENST00000553612 ICE2Q659A1 982 aa10.83□□□□□ -0.68
GTF2A1-203ENST00000553612 ISY1Q9ULR0 285 aaKnown RBP10.83□□□□□ -0.68
GTF2A1-203ENST00000553612 GBP6Q6ZN66 633 aa10.83□□□□□ -0.68
GTF2A1-203ENST00000553612 TPD52L2O43399 206 aaKnown RBP10.82□□□□□ -0.68
GTF2A1-203ENST00000553612 GYS2P54840 703 aa10.82□□□□□ -0.68
GTF2A1-203ENST00000553612 C17orf53Q8N3J3 647 aaPredicted RBP10.82□□□□□ -0.68
GTF2A1-203ENST00000553612 TXLNBQ8N3L3 684 aa10.82□□□□□ -0.68
GTF2A1-203ENST00000553612 RNF217Q8TC41 542 aa10.82□□□□□ -0.68
GTF2A1-203ENST00000553612 PRIMPOLQ96LW4 560 aa10.82□□□□□ -0.68
GTF2A1-203ENST00000553612 SETSIPP0DME0 302 aa10.82□□□□□ -0.68
GTF2A1-203ENST00000553612 GABPB1Q06547 395 aaPredicted RBP10.82□□□□□ -0.68
GTF2A1-203ENST00000553612 KTN1Q86UP2 1357 aaKnown RBP10.82□□□□□ -0.68
GTF2A1-203ENST00000553612 ARL10Q8N8L6 244 aa10.81□□□□□ -0.68
GTF2A1-203ENST00000553612 PRPF40AO75400 957 aaKnown RBP10.81□□□□□ -0.68
GTF2A1-203ENST00000553612 DNAJC21Q5F1R6 531 aaKnown RBP10.81□□□□□ -0.68
GTF2A1-203ENST00000553612 NEK11Q8NG66 645 aa10.81□□□□□ -0.68
GTF2A1-203ENST00000553612 G3BP2Q9UN86 482 aaKnown RBP10.81□□□□□ -0.68
GTF2A1-203ENST00000553612 IPO8O15397 1037 aaKnown RBP10.81□□□□□ -0.68
GTF2A1-203ENST00000553612 CT47B1P0C2W7 299 aaPredicted RBP10.81□□□□□ -0.68
GTF2A1-203ENST00000553612 PSMD2Q13200 908 aa10.81□□□□□ -0.68
GTF2A1-203ENST00000553612 HOMER1Q86YM7 354 aa10.81□□□□□ -0.68
GTF2A1-203ENST00000553612 COG6Q9Y2V7 657 aa10.81□□□□□ -0.68
GTF2A1-203ENST00000553612 CA8P35219 290 aa10.81□□□□□ -0.68
GTF2A1-203ENST00000553612 C16orf45Q96MC5 204 aaPredicted RBP10.8□□□□□ -0.68
GTF2A1-203ENST00000553612 NCAPGQ9BPX3 1015 aa10.8□□□□□ -0.68
GTF2A1-203ENST00000553612 JRKLQ9Y4A0 524 aa10.8□□□□□ -0.68
GTF2A1-203ENST00000553612 NBPF6Q5VWK0 638 aa10.8□□□□□ -0.68
GTF2A1-203ENST00000553612 NBPF5PQ86XG9 351 aaPredicted RBP10.8□□□□□ -0.68
GTF2A1-203ENST00000553612 NBPF4Q96M43 638 aa10.8□□□□□ -0.68
GTF2A1-203ENST00000553612 BCL2L12Q9HB09 334 aa10.8□□□□□ -0.68
GTF2A1-203ENST00000553612 INF2Q27J81 1249 aa10.8□□□□□ -0.68
GTF2A1-203ENST00000553612 NUCKS1Q9H1E3 243 aaKnown RBP10.8□□□□□ -0.68
GTF2A1-203ENST00000553612 ZKSCAN5Q9Y2L8 839 aa10.8□□□□□ -0.68
GTF2A1-203ENST00000553612 NAA25Q14CX7 972 aa10.79□□□□□ -0.68
GTF2A1-203ENST00000553612 ITPRIPQ8IWB1 547 aa10.79□□□□□ -0.68
GTF2A1-203ENST00000553612 CDCA7LQ96GN5 454 aa10.79□□□□□ -0.68
GTF2A1-203ENST00000553612 MYRIPQ8NFW9 859 aa10.79□□□□□ -0.68
GTF2A1-203ENST00000553612 FEZ1Q99689 392 aa10.79□□□□□ -0.68
GTF2A1-203ENST00000553612 CDR1P51861 262 aa10.79□□□□□ -0.68
GTF2A1-203ENST00000553612 ENOX2Q16206 610 aaKnown RBP10.79□□□□□ -0.68
GTF2A1-203ENST00000553612 HSP90B2PQ58FF3 399 aa10.79□□□□□ -0.68
GTF2A1-203ENST00000553612 SYCE3A1L190 88 aa10.78□□□□□ -0.68
GTF2A1-203ENST00000553612 CSB-PGBD3P0DP91 1061 aa10.78□□□□□ -0.68
GTF2A1-203ENST00000553612 GCKP35557 465 aa10.78□□□□□ -0.68
GTF2A1-203ENST00000553612 DZIP1Q86YF9 867 aaKnown RBP10.78□□□□□ -0.68
GTF2A1-203ENST00000553612 EGFL6Q8IUX8 553 aa10.78□□□□□ -0.68
GTF2A1-203ENST00000553612 PLEKHD1A6NEE1 506 aa10.78□□□□□ -0.68
GTF2A1-203ENST00000553612 NOLC1Q14978 699 aaKnown RBP eCLIP10.78□□□□□ -0.682e-26■■■■■ 43.1
GTF2A1-203ENST00000553612 ACRBPQ8NEB7 543 aa10.78□□□□□ -0.68
GTF2A1-203ENST00000553612 KIF4AO95239 1232 aa10.78□□□□□ -0.68
GTF2A1-203ENST00000553612 PRDM16Q9HAZ2 1276 aa10.78□□□□□ -0.68
GTF2A1-203ENST00000553612 RAI14Q9P0K7 980 aa10.78□□□□□ -0.68
GTF2A1-203ENST00000553612 GRIPAP1Q4V328 841 aa10.77□□□□□ -0.68
GTF2A1-203ENST00000553612 NUP133Q8WUM0 1156 aa10.77□□□□□ -0.68
GTF2A1-203ENST00000553612 TSPY26PQ9H489 355 aa10.77□□□□□ -0.68
GTF2A1-203ENST00000553612 CASQ1P31415 396 aa10.77□□□□□ -0.68
GTF2A1-203ENST00000553612 TERF1P54274 439 aa10.77□□□□□ -0.68
GTF2A1-203ENST00000553612 HNRNPH2P55795 449 aaKnown RBP10.77□□□□□ -0.68
GTF2A1-203ENST00000553612 GBP2P32456 591 aaPredicted RBP10.77□□□□□ -0.69
GTF2A1-203ENST00000553612 TTC19Q6DKK2 380 aaPredicted RBP10.77□□□□□ -0.69
GTF2A1-203ENST00000553612 CXorf56Q9H5V9 222 aa10.77□□□□□ -0.69
GTF2A1-203ENST00000553612 CEP57Q86XR8 500 aa10.77□□□□□ -0.69
GTF2A1-203ENST00000553612 KNSTRNQ9Y448 316 aa10.77□□□□□ -0.69
GTF2A1-203ENST00000553612 RPUSD2Q8IZ73 545 aaKnown RBP10.76□□□□□ -0.69
GTF2A1-203ENST00000553612 ACBD3Q9H3P7 528 aa10.76□□□□□ -0.69
GTF2A1-203ENST00000553612 DHX16O60231 1041 aaKnown RBP10.76□□□□□ -0.69
GTF2A1-203ENST00000553612 CLIP1P30622 1438 aa10.76□□□□□ -0.69
GTF2A1-203ENST00000553612 CARD11Q9BXL7 1154 aa10.76□□□□□ -0.69
GTF2A1-203ENST00000553612 C22orf23Q9BZE7 217 aa10.76□□□□□ -0.69
GTF2A1-203ENST00000553612 KIF16BQ96L93 1317 aa10.76□□□□□ -0.69
GTF2A1-203ENST00000553612 ZRSR2Q15696 482 aaKnown RBP10.75□□□□□ -0.69
GTF2A1-203ENST00000553612 CAND2O75155 1236 aa10.75□□□□□ -0.69
GTF2A1-203ENST00000553612 TTC12Q9H892 705 aaPredicted RBP10.75□□□□□ -0.69
GTF2A1-203ENST00000553612 KIAA0754O94854 1291 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms