RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.06■□□□□ 0
PCNX1-205ENST00000553508 SALL2Q9Y467 1007 aaPredicted RBP15.06■□□□□ 0
PCNX1-205ENST00000553508 C6orf229H3BNL8 230 aa15.05■□□□□ -0
PCNX1-205ENST00000553508 GGCXP38435 758 aa15.05■□□□□ -0
PCNX1-205ENST00000553508 RSBN1LQ6PCB5 846 aaPredicted RBP15.05■□□□□ -0
PCNX1-205ENST00000553508 POLR3EQ9NVU0 708 aa15.05■□□□□ -0
PCNX1-205ENST00000553508 PLEKHG3A1L390 1219 aa15.04■□□□□ -0
PCNX1-205ENST00000553508 PPEF1O14829 653 aaPredicted RBP15.04■□□□□ -0
PCNX1-205ENST00000553508 FAM160A2Q8N612 972 aaPredicted RBP15.04■□□□□ -0
PCNX1-205ENST00000553508 RSPH6AQ9H0K4 717 aa15.03■□□□□ -0
PCNX1-205ENST00000553508 ATP1B4Q9UN42 357 aaPredicted RBP15.03■□□□□ -0
PCNX1-205ENST00000553508 PCDHB15Q9Y5E8 787 aa15.03■□□□□ -0
PCNX1-205ENST00000553508 USB1Q9BQ65 265 aaKnown RBP15.02■□□□□ -0
PCNX1-205ENST00000553508 PRDM9Q9NQV7 894 aa15.02■□□□□ -0
PCNX1-205ENST00000553508 LIMD1Q9UGP4 676 aa15.02■□□□□ -0
PCNX1-205ENST00000553508 SPTLC1O15269 473 aa15.01□□□□□ -0.01
PCNX1-205ENST00000553508 RNF223E7ERA6 249 aa14.99□□□□□ -0.01
PCNX1-205ENST00000553508 CLK2P49760 499 aaKnown RBP14.98□□□□□ -0.01
PCNX1-205ENST00000553508 MTMR2Q13614 643 aa14.96□□□□□ -0.01
PCNX1-205ENST00000553508 CABLES1Q8TDN4 633 aa14.96□□□□□ -0.01
PCNX1-205ENST00000553508 GJA5P36382 358 aa14.95□□□□□ -0.02
PCNX1-205ENST00000553508 MSS51Q4VC12 460 aa14.95□□□□□ -0.02
PCNX1-205ENST00000553508 RETREG3Q86VR2 466 aa14.95□□□□□ -0.02
PCNX1-205ENST00000553508 HRCP23327 699 aa14.93□□□□□ -0.02
PCNX1-205ENST00000553508 SKIV2LQ15477 1246 aaKnown RBP14.93□□□□□ -0.02
PCNX1-205ENST00000553508 SH3D19Q5HYK7 790 aa14.93□□□□□ -0.02
PCNX1-205ENST00000553508 PROCA1Q8NCQ7 364 aaPredicted RBP14.93□□□□□ -0.02
PCNX1-205ENST00000553508 NUTM2BA6NNL0 878 aaPredicted RBP14.92□□□□□ -0.02
PCNX1-205ENST00000553508 NUTM2EB1AL46 878 aaPredicted RBP14.92□□□□□ -0.02
PCNX1-205ENST00000553508 QPCTQ16769 361 aa14.92□□□□□ -0.02
PCNX1-205ENST00000553508 NUTM2DQ5VT03 806 aaPredicted RBP14.92□□□□□ -0.02
PCNX1-205ENST00000553508 NUTM2AQ8IVF1 878 aaPredicted RBP14.92□□□□□ -0.02
PCNX1-205ENST00000553508 ZBTB3Q9H5J0 574 aa14.92□□□□□ -0.02
PCNX1-205ENST00000553508 ANKLE1Q8NAG6 615 aa14.91□□□□□ -0.02
PCNX1-205ENST00000553508 PRR7Q8TB68 274 aa14.91□□□□□ -0.02
PCNX1-205ENST00000553508 FCF1Q9Y324 198 aaKnown RBP14.91□□□□□ -0.02
PCNX1-205ENST00000553508 PRKD2Q9BZL6 878 aa14.89□□□□□ -0.03
PCNX1-205ENST00000553508 PRPF38BQ5VTL8 546 aaKnown RBP14.88□□□□□ -0.03
PCNX1-205ENST00000553508 TSC1Q92574 1164 aa14.88□□□□□ -0.03
PCNX1-205ENST00000553508 SPDYE5A6NIY4 337 aa14.87□□□□□ -0.03
PCNX1-205ENST00000553508 JUNDP17535 347 aa14.87□□□□□ -0.03
PCNX1-205ENST00000553508 MMP16P51512 607 aa14.87□□□□□ -0.03
PCNX1-205ENST00000553508 PLA2G2CQ5R387 149 aa14.87□□□□□ -0.03
PCNX1-205ENST00000553508 CCDC24Q8N4L8 307 aa14.87□□□□□ -0.03
PCNX1-205ENST00000553508 LILRB3O75022 631 aa14.86□□□□□ -0.03
PCNX1-205ENST00000553508 DXOO77932 396 aaKnown RBP14.86□□□□□ -0.03
PCNX1-205ENST00000553508 CFAP99D6REC4 459 aa14.85□□□□□ -0.03
PCNX1-205ENST00000553508 TUSC1Q2TAM9 212 aa14.85□□□□□ -0.03
PCNX1-205ENST00000553508 RTL5Q5HYW3 569 aaPredicted RBP14.85□□□□□ -0.03
PCNX1-205ENST00000553508 RGS20O76081 388 aa14.84□□□□□ -0.03
PCNX1-205ENST00000553508 PCMTD1Q96MG8 357 aaPredicted RBP14.83□□□□□ -0.04
PCNX1-205ENST00000553508 EMID1Q96A84 441 aaPredicted RBP14.82□□□□□ -0.04
PCNX1-205ENST00000553508 SLC19A1P41440 591 aa14.81□□□□□ -0.04
PCNX1-205ENST00000553508 LIAT1Q6ZQX7 453 aa14.81□□□□□ -0.04
PCNX1-205ENST00000553508 FBXO31Q5XUX0 539 aaPredicted RBP14.8□□□□□ -0.04
PCNX1-205ENST00000553508 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.8□□□□□ -0.04
PCNX1-205ENST00000553508 NUDT12Q9BQG2 462 aa14.79□□□□□ -0.04
PCNX1-205ENST00000553508 ZBTB24O43167 697 aaPredicted RBP14.77□□□□□ -0.05
PCNX1-205ENST00000553508 GOPCQ9HD26 462 aa14.77□□□□□ -0.05
PCNX1-205ENST00000553508 V9GY48 417 aaPredicted RBP14.77□□□□□ -0.05
PCNX1-205ENST00000553508 DESI1Q6ICB0 168 aa14.75□□□□□ -0.05
PCNX1-205ENST00000553508 PER1O15534 1290 aaPredicted RBP14.73□□□□□ -0.05
PCNX1-205ENST00000553508 CCNYL3P0C7X3 344 aa14.73□□□□□ -0.05
PCNX1-205ENST00000553508 PTPRNQ16849 979 aa14.73□□□□□ -0.05
PCNX1-205ENST00000553508 HELBQ8NG08 1087 aaPredicted RBP14.73□□□□□ -0.05
PCNX1-205ENST00000553508 SPRYD7Q5W111 196 aa14.72□□□□□ -0.05
PCNX1-205ENST00000553508 LYPD8Q6UX82 237 aa14.72□□□□□ -0.05
PCNX1-205ENST00000553508 CTHP32929 405 aa14.71□□□□□ -0.05
PCNX1-205ENST00000553508 PPP2R2DQ66LE6 453 aa14.71□□□□□ -0.05
PCNX1-205ENST00000553508 PTCRAQ6ISU1 281 aaPredicted RBP14.71□□□□□ -0.05
PCNX1-205ENST00000553508 CTDSPL2Q05D32 466 aa14.7□□□□□ -0.06
PCNX1-205ENST00000553508 AP1G2O75843 785 aa14.69□□□□□ -0.06
PCNX1-205ENST00000553508 RPIAP49247 311 aa14.69□□□□□ -0.06
PCNX1-205ENST00000553508 EVA1BQ9NVM1 165 aa14.69□□□□□ -0.06
PCNX1-205ENST00000553508 CD2BP2O95400 341 aaKnown RBP14.68□□□□□ -0.06
PCNX1-205ENST00000553508 RFC5P40937 340 aa14.68□□□□□ -0.06
PCNX1-205ENST00000553508 ZNF697Q5TEC3 545 aa14.68□□□□□ -0.06
PCNX1-205ENST00000553508 ZNF598Q86UK7 904 aaKnown RBP14.68□□□□□ -0.06
PCNX1-205ENST00000553508 KCNH2Q12809 1159 aa14.66□□□□□ -0.06
PCNX1-205ENST00000553508 TRIM32Q13049 653 aa14.66□□□□□ -0.06
PCNX1-205ENST00000553508 MAP10Q9P2G4 905 aa14.66□□□□□ -0.06
PCNX1-205ENST00000553508 LRRN4Q8WUT4 740 aa14.63□□□□□ -0.07
PCNX1-205ENST00000553508 UNC93B1Q9H1C4 597 aa14.63□□□□□ -0.07
PCNX1-205ENST00000553508 FOXC1Q12948 553 aa14.62□□□□□ -0.07
PCNX1-205ENST00000553508 F12P00748 615 aaPredicted RBP14.61□□□□□ -0.07
PCNX1-205ENST00000553508 LINC01559Q495D7 138 aa14.61□□□□□ -0.07
PCNX1-205ENST00000553508 IRX2Q9BZI1 471 aaPredicted RBP14.61□□□□□ -0.07
PCNX1-205ENST00000553508 TNFRSF10AO00220 468 aa14.59□□□□□ -0.07
PCNX1-205ENST00000553508 GFRA3O60609 400 aa14.58□□□□□ -0.08
PCNX1-205ENST00000553508 USP17L8P0C7I0 530 aa14.58□□□□□ -0.08
PCNX1-205ENST00000553508 BAP1Q92560 729 aa14.58□□□□□ -0.08
PCNX1-205ENST00000553508 TRIM67Q6ZTA4 783 aa14.57□□□□□ -0.08
PCNX1-205ENST00000553508 PDZRN3Q9UPQ7 1066 aa14.57□□□□□ -0.08
PCNX1-205ENST00000553508 SKOR1P84550 965 aa14.56□□□□□ -0.08
PCNX1-205ENST00000553508 TMEM259Q4ZIN3 620 aa14.56□□□□□ -0.08
PCNX1-205ENST00000553508 NR6A1Q15406 480 aa14.54□□□□□ -0.08
PCNX1-205ENST00000553508 PKD2L1Q9P0L9 805 aa14.54□□□□□ -0.08
PCNX1-205ENST00000553508 GDF9O60383 454 aa14.53□□□□□ -0.08
PCNX1-205ENST00000553508 SH3BP2P78314 561 aa14.52□□□□□ -0.09
PCNX1-205ENST00000553508 HMX1Q9NP08 348 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms