RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 RGS17Q9UGC6 210 aaPredicted RBP20.9■□□□□ 0.94
ABCD4-218ENST00000553486 KTN1Q86UP2 1357 aaKnown RBP20.9■□□□□ 0.94
ABCD4-218ENST00000553486 C14orf37Q86TY3 774 aa20.88■□□□□ 0.93
ABCD4-218ENST00000553486 FAM9BQ8IZU0 186 aa20.85■□□□□ 0.93
ABCD4-218ENST00000553486 C19orf44Q9H6X5 657 aa20.85■□□□□ 0.93
ABCD4-218ENST00000553486 AMOTL2Q9Y2J4 779 aa20.85■□□□□ 0.93
ABCD4-218ENST00000553486 EIF3AQ14152 1382 aaKnown RBP20.85■□□□□ 0.93
ABCD4-218ENST00000553486 RALBP1Q15311 655 aa20.85■□□□□ 0.93
ABCD4-218ENST00000553486 PTPRUQ92729 1446 aa20.85■□□□□ 0.93
ABCD4-218ENST00000553486 CADPS2Q86UW7 1296 aa20.84■□□□□ 0.93
ABCD4-218ENST00000553486 SETBP1Q9Y6X0 1596 aa20.84■□□□□ 0.93
ABCD4-218ENST00000553486 NRXN1Q9ULB1 1477 aa20.83■□□□□ 0.93
ABCD4-218ENST00000553486 PPLO60437 1756 aa20.83■□□□□ 0.92
ABCD4-218ENST00000553486 JCADQ9P266 1359 aa20.82■□□□□ 0.92
ABCD4-218ENST00000553486 RPGRIP1LQ68CZ1 1315 aa20.82■□□□□ 0.92
ABCD4-218ENST00000553486 ADGRF5Q8IZF2 1346 aa20.82■□□□□ 0.92
ABCD4-218ENST00000553486 ATF3P18847 181 aa20.82■□□□□ 0.92
ABCD4-218ENST00000553486 CDCA8Q53HL2 280 aa20.82■□□□□ 0.92
ABCD4-218ENST00000553486 NRXN3Q9Y4C0 1643 aa20.82■□□□□ 0.92
ABCD4-218ENST00000553486 PHLPP1O60346 1717 aa20.82■□□□□ 0.92
ABCD4-218ENST00000553486 SLC24A1O60721 1099 aa20.81■□□□□ 0.92
ABCD4-218ENST00000553486 CNGB1Q14028 1251 aaPredicted RBP20.81■□□□□ 0.92
ABCD4-218ENST00000553486 SUPT16HQ9Y5B9 1047 aaKnown RBP20.81■□□□□ 0.92
ABCD4-218ENST00000553486 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.8■□□□□ 0.92
ABCD4-218ENST00000553486 MYBBP1AQ9BQG0 1328 aaKnown RBP20.79■□□□□ 0.92
ABCD4-218ENST00000553486 CFAP70Q5T0N1 1121 aa20.79■□□□□ 0.92
ABCD4-218ENST00000553486 COL16A1Q07092 1604 aaPredicted RBP20.79■□□□□ 0.92
ABCD4-218ENST00000553486 METP08581 1390 aa20.78■□□□□ 0.92
ABCD4-218ENST00000553486 XRN1Q8IZH2 1706 aaKnown RBP20.78■□□□□ 0.92
ABCD4-218ENST00000553486 DCCP43146 1447 aa20.78■□□□□ 0.92
ABCD4-218ENST00000553486 PER1O15534 1290 aaPredicted RBP20.78■□□□□ 0.92
ABCD4-218ENST00000553486 POTEAQ6S8J7 498 aa20.77■□□□□ 0.92
ABCD4-218ENST00000553486 NEXMIFQ5QGS0 1516 aa20.76■□□□□ 0.91
ABCD4-218ENST00000553486 TMC1Q8TDI8 760 aa20.76■□□□□ 0.91
ABCD4-218ENST00000553486 BRD4O60885 1362 aaPredicted RBP20.76■□□□□ 0.91
ABCD4-218ENST00000553486 PANK3Q9H999 370 aa20.76■□□□□ 0.91
ABCD4-218ENST00000553486 ZBED9Q6R2W3 1325 aa20.75■□□□□ 0.91
ABCD4-218ENST00000553486 AHDC1Q5TGY3 1603 aaPredicted RBP20.75■□□□□ 0.91
ABCD4-218ENST00000553486 NEFLP07196 543 aa20.74■□□□□ 0.91
ABCD4-218ENST00000553486 PARD3Q8TEW0 1356 aa20.74■□□□□ 0.91
ABCD4-218ENST00000553486 BRINP3Q76B58 766 aa20.74■□□□□ 0.91
ABCD4-218ENST00000553486 PIK3C2GO75747 1445 aa20.73■□□□□ 0.91
ABCD4-218ENST00000553486 SPATA31A6Q5VVP1 1343 aa20.73■□□□□ 0.91
ABCD4-218ENST00000553486 PNISRQ8TF01 805 aaKnown RBP20.71■□□□□ 0.91
ABCD4-218ENST00000553486 C14orf93Q9H972 538 aaKnown RBP20.71■□□□□ 0.91
ABCD4-218ENST00000553486 MST1RQ04912 1400 aa20.7■□□□□ 0.9
ABCD4-218ENST00000553486 VGFO15240 615 aaPredicted RBP20.69■□□□□ 0.9
ABCD4-218ENST00000553486 NLRP13Q86W25 1043 aa20.69■□□□□ 0.9
ABCD4-218ENST00000553486 LRP6O75581 1613 aa20.69■□□□□ 0.9
ABCD4-218ENST00000553486 ADGRL3Q9HAR2 1447 aa20.69■□□□□ 0.9
ABCD4-218ENST00000553486 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
ABCD4-218ENST00000553486 FKBP8Q14318 412 aa20.68■□□□□ 0.9
ABCD4-218ENST00000553486 SBNO2Q9Y2G9 1366 aa20.67■□□□□ 0.9
ABCD4-218ENST00000553486 SHPRHQ149N8 1683 aa20.65■□□□□ 0.9
ABCD4-218ENST00000553486 KNSTRNQ9Y448 316 aa20.65■□□□□ 0.9
ABCD4-218ENST00000553486 MYOM1P52179 1685 aa20.65■□□□□ 0.9
ABCD4-218ENST00000553486 LRPPRCP42704 1394 aaKnown RBP20.65■□□□□ 0.9
ABCD4-218ENST00000553486 CC2D1BQ5T0F9 858 aaKnown RBP20.64■□□□□ 0.9
ABCD4-218ENST00000553486 MEX3CQ5U5Q3 659 aaKnown RBP20.64■□□□□ 0.9
ABCD4-218ENST00000553486 PTCH1Q13635 1447 aa20.64■□□□□ 0.89
ABCD4-218ENST00000553486 ADGRB1O14514 1584 aa20.64■□□□□ 0.89
ABCD4-218ENST00000553486 CENPJQ9HC77 1338 aaPredicted RBP20.63■□□□□ 0.89
ABCD4-218ENST00000553486 PELP1Q8IZL8 1130 aaKnown RBP20.62■□□□□ 0.89
ABCD4-218ENST00000553486 NALCNQ8IZF0 1738 aa20.62■□□□□ 0.89
ABCD4-218ENST00000553486 ROBO2Q9HCK4 1378 aa20.61■□□□□ 0.89
ABCD4-218ENST00000553486 SETD1AO15047 1707 aaKnown RBP20.61■□□□□ 0.89
ABCD4-218ENST00000553486 ZNF772Q68DY9 489 aaPredicted RBP20.6■□□□□ 0.89
ABCD4-218ENST00000553486 QRICH2Q9H0J4 1663 aa20.6■□□□□ 0.89
ABCD4-218ENST00000553486 TRAK1Q9UPV9 953 aa20.6■□□□□ 0.89
ABCD4-218ENST00000553486 NHSL1Q5SYE7 1610 aa20.59■□□□□ 0.89
ABCD4-218ENST00000553486 LRRC59Q96AG4 307 aaKnown RBP20.59■□□□□ 0.89
ABCD4-218ENST00000553486 C1orf167Q5SNV9 1468 aa20.57■□□□□ 0.88
ABCD4-218ENST00000553486 NPC1L1Q9UHC9 1359 aa20.57■□□□□ 0.88
ABCD4-218ENST00000553486 NUTM2BA6NNL0 878 aaPredicted RBP20.57■□□□□ 0.88
ABCD4-218ENST00000553486 NUTM2EB1AL46 878 aaPredicted RBP20.57■□□□□ 0.88
ABCD4-218ENST00000553486 NUTM2AQ8IVF1 878 aaPredicted RBP20.57■□□□□ 0.88
ABCD4-218ENST00000553486 DDX17Q92841 729 aaKnown RBP20.57■□□□□ 0.88
ABCD4-218ENST00000553486 TMEM132EQ6IEE7 984 aa20.57■□□□□ 0.88
ABCD4-218ENST00000553486 AMER1Q5JTC6 1135 aaPredicted RBP20.56■□□□□ 0.88
ABCD4-218ENST00000553486 INSRP06213 1382 aa20.54■□□□□ 0.88
ABCD4-218ENST00000553486 ARHGEF28Q8N1W1 1705 aaKnown RBP20.54■□□□□ 0.88
ABCD4-218ENST00000553486 PNPLA6Q8IY17 1366 aa20.54■□□□□ 0.88
ABCD4-218ENST00000553486 SMG6Q86US8 1419 aaKnown RBP20.53■□□□□ 0.88
ABCD4-218ENST00000553486 ORAI2Q96SN7 254 aa20.51■□□□□ 0.87
ABCD4-218ENST00000553486 PUS7Q96PZ0 661 aaKnown RBP20.5■□□□□ 0.87
ABCD4-218ENST00000553486 AFF2P51816 1311 aa20.5■□□□□ 0.87
ABCD4-218ENST00000553486 NUDCQ9Y266 331 aa20.5■□□□□ 0.87
ABCD4-218ENST00000553486 PPP2R1AP30153 589 aa20.49■□□□□ 0.87
ABCD4-218ENST00000553486 ERICH6BQ5W0A0 696 aa20.49■□□□□ 0.87
ABCD4-218ENST00000553486 SOS2Q07890 1332 aaPredicted RBP20.48■□□□□ 0.87
ABCD4-218ENST00000553486 RXRBP28702 533 aa20.48■□□□□ 0.87
ABCD4-218ENST00000553486 EVC2Q86UK5 1308 aa20.47■□□□□ 0.87
ABCD4-218ENST00000553486 C8orf37Q96NL8 207 aa20.47■□□□□ 0.87
ABCD4-218ENST00000553486 TECPR2O15040 1411 aa20.47■□□□□ 0.87
ABCD4-218ENST00000553486 CDC42BPGQ6DT37 1551 aa20.46■□□□□ 0.87
ABCD4-218ENST00000553486 CDK12Q9NYV4 1490 aaPredicted RBP20.45■□□□□ 0.86
ABCD4-218ENST00000553486 CARD14Q9BXL6 1004 aa20.44■□□□□ 0.86
ABCD4-218ENST00000553486 STK26Q9P289 416 aa20.44■□□□□ 0.86
ABCD4-218ENST00000553486 BLMP54132 1417 aaPredicted RBP20.44■□□□□ 0.86
ABCD4-218ENST00000553486 ABCC11Q96J66 1382 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms