RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 CDC42BPGQ6DT37 1551 aa25.04■■□□□ 1.6
CDK4-207ENST00000550419 SCAF1Q9H7N4 1312 aaKnown RBP25.04■■□□□ 1.6
CDK4-207ENST00000550419 PRAM1Q96QH2 718 aa25.03■■□□□ 1.6
CDK4-207ENST00000550419 TRAK1Q9UPV9 953 aa25.03■■□□□ 1.6
CDK4-207ENST00000550419 MST1RQ04912 1400 aa25.02■■□□□ 1.6
CDK4-207ENST00000550419 NBPF8Q3BBV2 869 aa25.01■■□□□ 1.59
CDK4-207ENST00000550419 POGKQ9P215 609 aa25■■□□□ 1.59
CDK4-207ENST00000550419 GPRASP1Q5JY77 1395 aa24.99■■□□□ 1.59
CDK4-207ENST00000550419 ARHGEF28Q8N1W1 1705 aaKnown RBP24.98■■□□□ 1.59
CDK4-207ENST00000550419 ROBO1Q9Y6N7 1651 aa24.98■■□□□ 1.59
CDK4-207ENST00000550419 ROCK2O75116 1388 aaKnown RBP24.97■■□□□ 1.59
CDK4-207ENST00000550419 RALGAPBQ86X10 1494 aa24.96■■□□□ 1.59
CDK4-207ENST00000550419 ADGRB2O60241 1585 aa24.96■■□□□ 1.59
CDK4-207ENST00000550419 C1orf167Q5SNV9 1468 aa24.94■■□□□ 1.58
CDK4-207ENST00000550419 HSPA1LP34931 641 aa24.93■■□□□ 1.58
CDK4-207ENST00000550419 SAFB2Q14151 953 aaKnown RBP eCLIP24.92■■□□□ 1.58
CDK4-207ENST00000550419 BRINP3Q76B58 766 aa24.92■■□□□ 1.58
CDK4-207ENST00000550419 FMN2Q9NZ56 1722 aa24.9■■□□□ 1.58
CDK4-207ENST00000550419 CENPJQ9HC77 1338 aaPredicted RBP24.87■■□□□ 1.57
CDK4-207ENST00000550419 AHDC1Q5TGY3 1603 aaPredicted RBP24.87■■□□□ 1.57
CDK4-207ENST00000550419 EIF3AQ14152 1382 aaKnown RBP24.87■■□□□ 1.57
CDK4-207ENST00000550419 MINK1Q8N4C8 1332 aaPredicted RBP24.86■■□□□ 1.57
CDK4-207ENST00000550419 CARD11Q9BXL7 1154 aa24.86■■□□□ 1.57
CDK4-207ENST00000550419 ANKARQ7Z5J8 1434 aa24.86■■□□□ 1.57
CDK4-207ENST00000550419 WASLO00401 505 aaPredicted RBP24.85■■□□□ 1.57
CDK4-207ENST00000550419 ORAI2Q96SN7 254 aa24.83■■□□□ 1.57
CDK4-207ENST00000550419 HIRIP3Q9BW71 556 aaPredicted RBP24.83■■□□□ 1.57
CDK4-207ENST00000550419 NHSL1Q5SYE7 1610 aa24.83■■□□□ 1.56
CDK4-207ENST00000550419 TULP4Q9NRJ4 1543 aa24.81■■□□□ 1.56
CDK4-207ENST00000550419 PHLPP1O60346 1717 aa24.81■■□□□ 1.56
CDK4-207ENST00000550419 ESCO1Q5FWF5 840 aa24.8■■□□□ 1.56
CDK4-207ENST00000550419 COL16A1Q07092 1604 aaPredicted RBP24.79■■□□□ 1.56
CDK4-207ENST00000550419 QRICH2Q9H0J4 1663 aa24.79■■□□□ 1.56
CDK4-207ENST00000550419 SBNO2Q9Y2G9 1366 aa24.79■■□□□ 1.56
CDK4-207ENST00000550419 NUTM2FA1L443 756 aa24.78■■□□□ 1.56
CDK4-207ENST00000550419 USP32Q8NFA0 1604 aa24.78■■□□□ 1.56
CDK4-207ENST00000550419 KIF1AQ12756 1690 aa24.77■■□□□ 1.56
CDK4-207ENST00000550419 CDK19Q9BWU1 502 aa24.76■■□□□ 1.55
CDK4-207ENST00000550419 SOS2Q07890 1332 aaPredicted RBP24.75■■□□□ 1.55
CDK4-207ENST00000550419 NPHP3Q7Z494 1330 aa24.75■■□□□ 1.55
CDK4-207ENST00000550419 PRR36Q9H6K5 1346 aa24.74■■□□□ 1.55
CDK4-207ENST00000550419 ATP7BP35670 1465 aa24.74■■□□□ 1.55
CDK4-207ENST00000550419 DISP3Q9P2K9 1392 aa24.73■■□□□ 1.55
CDK4-207ENST00000550419 PHF8Q9UPP1 1060 aa24.73■■□□□ 1.55
CDK4-207ENST00000550419 JCADQ9P266 1359 aa24.72■■□□□ 1.55
CDK4-207ENST00000550419 RGPD8O14715 1765 aaPredicted RBP24.72■■□□□ 1.55
CDK4-207ENST00000550419 EVC2Q86UK5 1308 aa24.71■■□□□ 1.55
CDK4-207ENST00000550419 LRRC59Q96AG4 307 aaKnown RBP24.71■■□□□ 1.55
CDK4-207ENST00000550419 NUDT16Q96DE0 195 aaKnown RBP24.71■■□□□ 1.55
CDK4-207ENST00000550419 FOXO3O43524 673 aa24.7■■□□□ 1.54
CDK4-207ENST00000550419 SLC24A1O60721 1099 aa24.7■■□□□ 1.54
CDK4-207ENST00000550419 DDX17Q92841 729 aaKnown RBP24.7■■□□□ 1.54
CDK4-207ENST00000550419 PXDNQ92626 1479 aa24.7■■□□□ 1.54
CDK4-207ENST00000550419 CCDC61Q9Y6R9 512 aa24.69■■□□□ 1.54
CDK4-207ENST00000550419 ITSN1Q15811 1721 aa24.69■■□□□ 1.54
CDK4-207ENST00000550419 USP47Q96K76 1375 aa24.67■■□□□ 1.54
CDK4-207ENST00000550419 SRPK2P78362 688 aaKnown RBP24.67■■□□□ 1.54
CDK4-207ENST00000550419 SHPRHQ149N8 1683 aa24.66■■□□□ 1.54
CDK4-207ENST00000550419 TOPAZ1Q8N9V7 1692 aa24.66■■□□□ 1.54
CDK4-207ENST00000550419 ST20-MTHFSA0A0A6YYL1 179 aa24.65■■□□□ 1.54
CDK4-207ENST00000550419 PLEKHG3A1L390 1219 aa24.64■■□□□ 1.54
CDK4-207ENST00000550419 TESK2Q96S53 571 aa24.64■■□□□ 1.54
CDK4-207ENST00000550419 SPATA31A6Q5VVP1 1343 aa24.63■■□□□ 1.53
CDK4-207ENST00000550419 PMFBP1Q8TBY8 1022 aa24.63■■□□□ 1.53
CDK4-207ENST00000550419 CABP2Q9NPB3 220 aa24.63■■□□□ 1.53
CDK4-207ENST00000550419 PSME1Q06323 249 aa24.62■■□□□ 1.53
CDK4-207ENST00000550419 KRT28Q7Z3Y7 464 aa24.62■■□□□ 1.53
CDK4-207ENST00000550419 PUS7Q96PZ0 661 aaKnown RBP24.62■■□□□ 1.53
CDK4-207ENST00000550419 POLR3AO14802 1390 aaPredicted RBP24.62■■□□□ 1.53
CDK4-207ENST00000550419 PNPLA6Q8IY17 1366 aa24.61■■□□□ 1.53
CDK4-207ENST00000550419 SBNO1A3KN83 1393 aa24.6■■□□□ 1.53
CDK4-207ENST00000550419 ATAD2Q6PL18 1390 aa24.59■■□□□ 1.53
CDK4-207ENST00000550419 NGDNQ8NEJ9 315 aaKnown RBP24.59■■□□□ 1.53
CDK4-207ENST00000550419 PPIP5K1Q6PFW1 1433 aa24.59■■□□□ 1.53
CDK4-207ENST00000550419 SPATA31A3Q5VYP0 1347 aa24.59■■□□□ 1.53
CDK4-207ENST00000550419 XPCQ01831 940 aaPredicted RBP24.58■■□□□ 1.53
CDK4-207ENST00000550419 MED1Q15648 1581 aaPredicted RBP24.58■■□□□ 1.52
CDK4-207ENST00000550419 COL22A1Q8NFW1 1626 aaPredicted RBP24.56■■□□□ 1.52
CDK4-207ENST00000550419 ACEP12821 1306 aa24.56■■□□□ 1.52
CDK4-207ENST00000550419 TNS3Q68CZ2 1445 aa24.55■■□□□ 1.52
CDK4-207ENST00000550419 CABP1Q9NZU7 370 aa24.54■■□□□ 1.52
CDK4-207ENST00000550419 BRD4O60885 1362 aaPredicted RBP24.54■■□□□ 1.52
CDK4-207ENST00000550419 TRPM3Q9HCF6 1732 aaPredicted RBP24.53■■□□□ 1.52
CDK4-207ENST00000550419 EIF4G2P78344 907 aaKnown RBP eCLIP24.53■■□□□ 1.52
CDK4-207ENST00000550419 ILDR2Q71H61 639 aa24.53■■□□□ 1.52
CDK4-207ENST00000550419 ARHGEF10O15013 1369 aa24.53■■□□□ 1.52
CDK4-207ENST00000550419 TMF1P82094 1093 aa24.52■■□□□ 1.52
CDK4-207ENST00000550419 LRP6O75581 1613 aa24.5■■□□□ 1.51
CDK4-207ENST00000550419 CDCA8Q53HL2 280 aa24.48■■□□□ 1.51
CDK4-207ENST00000550419 ALS2Q96Q42 1657 aa24.48■■□□□ 1.51
CDK4-207ENST00000550419 ZNF692Q9BU19 519 aaPredicted RBP24.48■■□□□ 1.51
CDK4-207ENST00000550419 NINLQ9Y2I6 1382 aa24.48■■□□□ 1.51
CDK4-207ENST00000550419 CPSF1Q10570 1443 aaKnown RBP24.47■■□□□ 1.51
CDK4-207ENST00000550419 USP6P35125 1406 aa24.46■■□□□ 1.51
CDK4-207ENST00000550419 HSPA5P11021 654 aaKnown RBP24.45■■□□□ 1.5
CDK4-207ENST00000550419 SSH2Q76I76 1423 aa24.44■■□□□ 1.5
CDK4-207ENST00000550419 NUTM2BA6NNL0 878 aaPredicted RBP24.43■■□□□ 1.5
CDK4-207ENST00000550419 NUTM2EB1AL46 878 aaPredicted RBP24.43■■□□□ 1.5
CDK4-207ENST00000550419 NUTM2AQ8IVF1 878 aaPredicted RBP24.43■■□□□ 1.5
CDK4-207ENST00000550419 PAK3O75914 559 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms