RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 SYMPKQ92797 1274 aaKnown RBP9.85□□□□□ -0.83
PFDN5-209ENST00000550069 THAP11Q96EK4 314 aa9.85□□□□□ -0.83
PFDN5-209ENST00000550069 MYSM1Q5VVJ2 828 aa9.84□□□□□ -0.83
PFDN5-209ENST00000550069 PRDM9Q9NQV7 894 aa9.83□□□□□ -0.84
PFDN5-209ENST00000550069 LIMD1Q9UGP4 676 aa9.83□□□□□ -0.84
PFDN5-209ENST00000550069 FBXO31Q5XUX0 539 aaPredicted RBP9.82□□□□□ -0.84
PFDN5-209ENST00000550069 PCDHB15Q9Y5E8 787 aa9.82□□□□□ -0.84
PFDN5-209ENST00000550069 ATAD2BQ9ULI0 1458 aa9.82□□□□□ -0.84
PFDN5-209ENST00000550069 NR1I2O75469 434 aa9.81□□□□□ -0.84
PFDN5-209ENST00000550069 USP46P62068 366 aa9.81□□□□□ -0.84
PFDN5-209ENST00000550069 BRICD5Q6PL45 260 aa9.81□□□□□ -0.84
PFDN5-209ENST00000550069 IL27Q8NEV9 243 aa9.81□□□□□ -0.84
PFDN5-209ENST00000550069 FDX1P10109 184 aa9.8□□□□□ -0.84
PFDN5-209ENST00000550069 IFFO2Q5TF58 517 aa9.8□□□□□ -0.84
PFDN5-209ENST00000550069 RSBN1LQ6PCB5 846 aaPredicted RBP9.8□□□□□ -0.84
PFDN5-209ENST00000550069 FAM160A2Q8N612 972 aaPredicted RBP9.8□□□□□ -0.84
PFDN5-209ENST00000550069 POLR3EQ9NVU0 708 aa9.8□□□□□ -0.84
PFDN5-209ENST00000550069 A0A0G2JS52 829 aa9.79□□□□□ -0.84
PFDN5-209ENST00000550069 S1PR4O95977 384 aa9.79□□□□□ -0.84
PFDN5-209ENST00000550069 PPEF1O14829 653 aaPredicted RBP9.78□□□□□ -0.84
PFDN5-209ENST00000550069 ADH1BP00325 375 aa9.78□□□□□ -0.84
PFDN5-209ENST00000550069 CSPP1Q1MSJ5 1256 aa9.78□□□□□ -0.84
PFDN5-209ENST00000550069 PPP1R18Q6NYC8 613 aa9.78□□□□□ -0.84
PFDN5-209ENST00000550069 CABLES1Q8TDN4 633 aa9.78□□□□□ -0.84
PFDN5-209ENST00000550069 SPSB2Q99619 263 aa9.78□□□□□ -0.84
PFDN5-209ENST00000550069 SPTLC1O15269 473 aa9.77□□□□□ -0.85
PFDN5-209ENST00000550069 QPCTQ16769 361 aa9.77□□□□□ -0.85
PFDN5-209ENST00000550069 RIC3Q7Z5B4 369 aa9.77□□□□□ -0.85
PFDN5-209ENST00000550069 GRIPAP1Q4V328 841 aa9.76□□□□□ -0.85
PFDN5-209ENST00000550069 PROCA1Q8NCQ7 364 aaPredicted RBP9.76□□□□□ -0.85
PFDN5-209ENST00000550069 BAZ1BQ9UIG0 1483 aaKnown RBP9.75□□□□□ -0.85
PFDN5-209ENST00000550069 DDRGK1Q96HY6 314 aa9.75□□□□□ -0.85
PFDN5-209ENST00000550069 MROH2BQ7Z745 1585 aa9.75□□□□□ -0.85
PFDN5-209ENST00000550069 FMNL1O95466 1100 aaPredicted RBP9.74□□□□□ -0.85
PFDN5-209ENST00000550069 RNF223E7ERA6 249 aa9.73□□□□□ -0.85
PFDN5-209ENST00000550069 C6orf229H3BNL8 230 aa9.73□□□□□ -0.85
PFDN5-209ENST00000550069 CLK2P49760 499 aaKnown RBP9.73□□□□□ -0.85
PFDN5-209ENST00000550069 SH3D19Q5HYK7 790 aa9.73□□□□□ -0.85
PFDN5-209ENST00000550069 EMID1Q96A84 441 aaPredicted RBP9.73□□□□□ -0.85
PFDN5-209ENST00000550069 SALL2Q9Y467 1007 aaPredicted RBP9.73□□□□□ -0.85
PFDN5-209ENST00000550069 HRCP23327 699 aa9.72□□□□□ -0.85
PFDN5-209ENST00000550069 PLA2G2CQ5R387 149 aa9.72□□□□□ -0.85
PFDN5-209ENST00000550069 USB1Q9BQ65 265 aaKnown RBP9.72□□□□□ -0.85
PFDN5-209ENST00000550069 SLC6A16Q9GZN6 736 aa9.72□□□□□ -0.85
PFDN5-209ENST00000550069 Q3C1V9 767 aa9.71□□□□□ -0.86
PFDN5-209ENST00000550069 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.71□□□□□ -0.86
PFDN5-209ENST00000550069 CFAP99D6REC4 459 aa9.7□□□□□ -0.86
PFDN5-209ENST00000550069 RTL5Q5HYW3 569 aaPredicted RBP9.7□□□□□ -0.86
PFDN5-209ENST00000550069 SKIV2LQ15477 1246 aaKnown RBP9.69□□□□□ -0.86
PFDN5-209ENST00000550069 DIXDC1Q155Q3 683 aa9.69□□□□□ -0.86
PFDN5-209ENST00000550069 MSS51Q4VC12 460 aa9.69□□□□□ -0.86
PFDN5-209ENST00000550069 RSF1Q96T23 1441 aaPredicted RBP9.69□□□□□ -0.86
PFDN5-209ENST00000550069 LILRB3O75022 631 aa9.68□□□□□ -0.86
PFDN5-209ENST00000550069 GJA5P36382 358 aa9.68□□□□□ -0.86
PFDN5-209ENST00000550069 MTMR2Q13614 643 aa9.68□□□□□ -0.86
PFDN5-209ENST00000550069 RETREG3Q86VR2 466 aa9.68□□□□□ -0.86
PFDN5-209ENST00000550069 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.68□□□□□ -0.86
PFDN5-209ENST00000550069 PRR7Q8TB68 274 aa9.67□□□□□ -0.86
PFDN5-209ENST00000550069 RSPH6AQ9H0K4 717 aa9.67□□□□□ -0.86
PFDN5-209ENST00000550069 DXOO77932 396 aaKnown RBP9.66□□□□□ -0.86
PFDN5-209ENST00000550069 MMP16P51512 607 aa9.66□□□□□ -0.86
PFDN5-209ENST00000550069 ZBTB3Q9H5J0 574 aa9.66□□□□□ -0.86
PFDN5-209ENST00000550069 FCF1Q9Y324 198 aaKnown RBP9.66□□□□□ -0.86
PFDN5-209ENST00000550069 LAMC3Q9Y6N6 1575 aa9.65□□□□□ -0.86
PFDN5-209ENST00000550069 TOP2AP11388 1531 aaKnown RBP9.65□□□□□ -0.86
PFDN5-209ENST00000550069 PER1O15534 1290 aaPredicted RBP9.64□□□□□ -0.87
PFDN5-209ENST00000550069 TUSC1Q2TAM9 212 aa9.64□□□□□ -0.87
PFDN5-209ENST00000550069 WIZO95785 1651 aa9.64□□□□□ -0.87
PFDN5-209ENST00000550069 JUNDP17535 347 aa9.63□□□□□ -0.87
PFDN5-209ENST00000550069 PRPF38BQ5VTL8 546 aaKnown RBP9.63□□□□□ -0.87
PFDN5-209ENST00000550069 LIAT1Q6ZQX7 453 aa9.63□□□□□ -0.87
PFDN5-209ENST00000550069 NUTM2BA6NNL0 878 aaPredicted RBP9.62□□□□□ -0.87
PFDN5-209ENST00000550069 NUTM2EB1AL46 878 aaPredicted RBP9.62□□□□□ -0.87
PFDN5-209ENST00000550069 NUTM2DQ5VT03 806 aaPredicted RBP9.62□□□□□ -0.87
PFDN5-209ENST00000550069 NUTM2AQ8IVF1 878 aaPredicted RBP9.62□□□□□ -0.87
PFDN5-209ENST00000550069 ANKLE1Q8NAG6 615 aa9.62□□□□□ -0.87
PFDN5-209ENST00000550069 PRKD2Q9BZL6 878 aa9.61□□□□□ -0.87
PFDN5-209ENST00000550069 GGCXP38435 758 aa9.6□□□□□ -0.87
PFDN5-209ENST00000550069 PTCRAQ6ISU1 281 aaPredicted RBP9.6□□□□□ -0.87
PFDN5-209ENST00000550069 TSC1Q92574 1164 aa9.6□□□□□ -0.87
PFDN5-209ENST00000550069 PCMTD1Q96MG8 357 aaPredicted RBP9.59□□□□□ -0.87
PFDN5-209ENST00000550069 GOPCQ9HD26 462 aa9.59□□□□□ -0.87
PFDN5-209ENST00000550069 ATP1B4Q9UN42 357 aaPredicted RBP9.59□□□□□ -0.87
PFDN5-209ENST00000550069 CTDSPL2Q05D32 466 aa9.58□□□□□ -0.88
PFDN5-209ENST00000550069 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
PFDN5-209ENST00000550069 SPDYE5A6NIY4 337 aa9.57□□□□□ -0.88
PFDN5-209ENST00000550069 RFC5P40937 340 aa9.57□□□□□ -0.88
PFDN5-209ENST00000550069 PPP2R2DQ66LE6 453 aa9.57□□□□□ -0.88
PFDN5-209ENST00000550069 NUDT12Q9BQG2 462 aa9.57□□□□□ -0.88
PFDN5-209ENST00000550069 CADPSQ9ULU8 1353 aa9.56□□□□□ -0.88
PFDN5-209ENST00000550069 LYPD8Q6UX82 237 aa9.56□□□□□ -0.88
PFDN5-209ENST00000550069 LRRN4Q8WUT4 740 aa9.56□□□□□ -0.88
PFDN5-209ENST00000550069 MAP10Q9P2G4 905 aa9.56□□□□□ -0.88
PFDN5-209ENST00000550069 PDS5BQ9NTI5 1447 aa9.56□□□□□ -0.88
PFDN5-209ENST00000550069 SLC19A1P41440 591 aa9.55□□□□□ -0.88
PFDN5-209ENST00000550069 PRDM2Q13029 1718 aa9.55□□□□□ -0.88
PFDN5-209ENST00000550069 PTPRNQ16849 979 aa9.54□□□□□ -0.88
PFDN5-209ENST00000550069 DESI1Q6ICB0 168 aa9.54□□□□□ -0.88
PFDN5-209ENST00000550069 HMX1Q9NP08 348 aaPredicted RBP9.54□□□□□ -0.88
PFDN5-209ENST00000550069 AP1G2O75843 785 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms