RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 TUSC1Q2TAM9 212 aa8.59□□□□□ -1.03
MRPL42-205ENST00000549561 MSS51Q4VC12 460 aa8.59□□□□□ -1.03
MRPL42-205ENST00000549561 PPP1R18Q6NYC8 613 aa8.59□□□□□ -1.03
MRPL42-205ENST00000549561 RIC3Q7Z5B4 369 aa8.59□□□□□ -1.03
MRPL42-205ENST00000549561 FAM160A2Q8N612 972 aaPredicted RBP8.59□□□□□ -1.03
MRPL42-205ENST00000549561 SH3D19Q5HYK7 790 aa8.58□□□□□ -1.04
MRPL42-205ENST00000549561 USB1Q9BQ65 265 aaKnown RBP8.57□□□□□ -1.04
MRPL42-205ENST00000549561 SLC6A16Q9GZN6 736 aa8.57□□□□□ -1.04
MRPL42-205ENST00000549561 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.57□□□□□ -1.04
MRPL42-205ENST00000549561 LIMD1Q9UGP4 676 aa8.57□□□□□ -1.04
MRPL42-205ENST00000549561 S1PR4O95977 384 aa8.56□□□□□ -1.04
MRPL42-205ENST00000549561 GGCXP38435 758 aa8.56□□□□□ -1.04
MRPL42-205ENST00000549561 SKIV2LQ15477 1246 aaKnown RBP8.56□□□□□ -1.04
MRPL42-205ENST00000549561 PCDHB15Q9Y5E8 787 aa8.56□□□□□ -1.04
MRPL42-205ENST00000549561 CLK2P49760 499 aaKnown RBP8.55□□□□□ -1.04
MRPL42-205ENST00000549561 PRPF38BQ5VTL8 546 aaKnown RBP8.55□□□□□ -1.04
MRPL42-205ENST00000549561 RETREG3Q86VR2 466 aa8.55□□□□□ -1.04
MRPL42-205ENST00000549561 SYMPKQ92797 1274 aaKnown RBP8.55□□□□□ -1.04
MRPL42-205ENST00000549561 GOPCQ9HD26 462 aa8.55□□□□□ -1.04
MRPL42-205ENST00000549561 RNF223E7ERA6 249 aa8.54□□□□□ -1.04
MRPL42-205ENST00000549561 MMP16P51512 607 aa8.54□□□□□ -1.04
MRPL42-205ENST00000549561 MTMR2Q13614 643 aa8.54□□□□□ -1.04
MRPL42-205ENST00000549561 IL27Q8NEV9 243 aa8.54□□□□□ -1.04
MRPL42-205ENST00000549561 PRDM9Q9NQV7 894 aa8.54□□□□□ -1.04
MRPL42-205ENST00000549561 SPDYE5A6NIY4 337 aa8.53□□□□□ -1.04
MRPL42-205ENST00000549561 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
MRPL42-205ENST00000549561 IRX2Q9BZI1 471 aaPredicted RBP8.53□□□□□ -1.04
MRPL42-205ENST00000549561 POLR3EQ9NVU0 708 aa8.53□□□□□ -1.04
MRPL42-205ENST00000549561 LILRB3O75022 631 aa8.52□□□□□ -1.05
MRPL42-205ENST00000549561 DXOO77932 396 aaKnown RBP8.52□□□□□ -1.05
MRPL42-205ENST00000549561 HRCP23327 699 aa8.52□□□□□ -1.05
MRPL42-205ENST00000549561 ANKLE1Q8NAG6 615 aa8.52□□□□□ -1.05
MRPL42-205ENST00000549561 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.52□□□□□ -1.05
MRPL42-205ENST00000549561 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
MRPL42-205ENST00000549561 PPEF1O14829 653 aaPredicted RBP8.51□□□□□ -1.05
MRPL42-205ENST00000549561 QPCTQ16769 361 aa8.51□□□□□ -1.05
MRPL42-205ENST00000549561 PROCA1Q8NCQ7 364 aaPredicted RBP8.5□□□□□ -1.05
MRPL42-205ENST00000549561 CABLES1Q8TDN4 633 aa8.5□□□□□ -1.05
MRPL42-205ENST00000549561 JUNDP17535 347 aa8.49□□□□□ -1.05
MRPL42-205ENST00000549561 DESI1Q6ICB0 168 aa8.49□□□□□ -1.05
MRPL42-205ENST00000549561 CFAP99D6REC4 459 aa8.48□□□□□ -1.05
MRPL42-205ENST00000549561 CSPP1Q1MSJ5 1256 aa8.48□□□□□ -1.05
MRPL42-205ENST00000549561 PRR7Q8TB68 274 aa8.48□□□□□ -1.05
MRPL42-205ENST00000549561 RTL5Q5HYW3 569 aaPredicted RBP8.47□□□□□ -1.05
MRPL42-205ENST00000549561 PLA2G2CQ5R387 149 aa8.47□□□□□ -1.05
MRPL42-205ENST00000549561 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
MRPL42-205ENST00000549561 PPP2R2DQ66LE6 453 aa8.47□□□□□ -1.05
MRPL42-205ENST00000549561 EMID1Q96A84 441 aaPredicted RBP8.47□□□□□ -1.05
MRPL42-205ENST00000549561 FCF1Q9Y324 198 aaKnown RBP8.47□□□□□ -1.05
MRPL42-205ENST00000549561 V9GY48 417 aaPredicted RBP8.46□□□□□ -1.06
MRPL42-205ENST00000549561 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
MRPL42-205ENST00000549561 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
MRPL42-205ENST00000549561 NUTM2DQ5VT03 806 aaPredicted RBP8.45□□□□□ -1.06
MRPL42-205ENST00000549561 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
MRPL42-205ENST00000549561 PCMTD1Q96MG8 357 aaPredicted RBP8.45□□□□□ -1.06
MRPL42-205ENST00000549561 PTPRNQ16849 979 aa8.44□□□□□ -1.06
MRPL42-205ENST00000549561 LYPD8Q6UX82 237 aa8.43□□□□□ -1.06
MRPL42-205ENST00000549561 LIAT1Q6ZQX7 453 aa8.43□□□□□ -1.06
MRPL42-205ENST00000549561 PRKD2Q9BZL6 878 aa8.43□□□□□ -1.06
MRPL42-205ENST00000549561 SLC19A1P41440 591 aa8.42□□□□□ -1.06
MRPL42-205ENST00000549561 RPIAP49247 311 aa8.42□□□□□ -1.06
MRPL42-205ENST00000549561 NUDT12Q9BQG2 462 aa8.42□□□□□ -1.06
MRPL42-205ENST00000549561 CCNYL3P0C7X3 344 aa8.41□□□□□ -1.06
MRPL42-205ENST00000549561 HELBQ8NG08 1087 aaPredicted RBP8.4□□□□□ -1.06
MRPL42-205ENST00000549561 EVA1BQ9NVM1 165 aa8.4□□□□□ -1.06
MRPL42-205ENST00000549561 PER1O15534 1290 aaPredicted RBP8.39□□□□□ -1.07
MRPL42-205ENST00000549561 F12P00748 615 aaPredicted RBP8.39□□□□□ -1.07
MRPL42-205ENST00000549561 RFC5P40937 340 aa8.39□□□□□ -1.07
MRPL42-205ENST00000549561 SPRYD7Q5W111 196 aa8.39□□□□□ -1.07
MRPL42-205ENST00000549561 PTCRAQ6ISU1 281 aaPredicted RBP8.38□□□□□ -1.07
MRPL42-205ENST00000549561 CCDC24Q8N4L8 307 aa8.38□□□□□ -1.07
MRPL42-205ENST00000549561 ATP1B4Q9UN42 357 aaPredicted RBP8.38□□□□□ -1.07
MRPL42-205ENST00000549561 CTDSPL2Q05D32 466 aa8.37□□□□□ -1.07
MRPL42-205ENST00000549561 KCNH2Q12809 1159 aa8.37□□□□□ -1.07
MRPL42-205ENST00000549561 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
MRPL42-205ENST00000549561 ZBTB24O43167 697 aaPredicted RBP8.36□□□□□ -1.07
MRPL42-205ENST00000549561 TSC1Q92574 1164 aa8.36□□□□□ -1.07
MRPL42-205ENST00000549561 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
MRPL42-205ENST00000549561 TRIM32Q13049 653 aa8.35□□□□□ -1.07
MRPL42-205ENST00000549561 TMEM259Q4ZIN3 620 aa8.35□□□□□ -1.07
MRPL42-205ENST00000549561 Q6ZNB5 142 aa8.35□□□□□ -1.07
MRPL42-205ENST00000549561 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
MRPL42-205ENST00000549561 UNC93B1Q9H1C4 597 aa8.34□□□□□ -1.07
MRPL42-205ENST00000549561 MAP10Q9P2G4 905 aa8.34□□□□□ -1.07
MRPL42-205ENST00000549561 AP1G2O75843 785 aa8.33□□□□□ -1.08
MRPL42-205ENST00000549561 LAPTM4AQ15012 233 aa8.33□□□□□ -1.08
MRPL42-205ENST00000549561 TMEM132AQ24JP5 1023 aa8.33□□□□□ -1.08
MRPL42-205ENST00000549561 USP17L8P0C7I0 530 aa8.32□□□□□ -1.08
MRPL42-205ENST00000549561 TRIM67Q6ZTA4 783 aa8.32□□□□□ -1.08
MRPL42-205ENST00000549561 LRRN4Q8WUT4 740 aa8.32□□□□□ -1.08
MRPL42-205ENST00000549561 GDF9O60383 454 aa8.31□□□□□ -1.08
MRPL42-205ENST00000549561 CTHP32929 405 aa8.31□□□□□ -1.08
MRPL42-205ENST00000549561 WNT7BP56706 349 aa8.31□□□□□ -1.08
MRPL42-205ENST00000549561 SKOR1P84550 965 aa8.3□□□□□ -1.08
MRPL42-205ENST00000549561 PRR20EP86478 221 aa8.3□□□□□ -1.08
MRPL42-205ENST00000549561 PRR20CP86479 221 aa8.3□□□□□ -1.08
MRPL42-205ENST00000549561 PRR20DP86480 221 aa8.3□□□□□ -1.08
MRPL42-205ENST00000549561 PRR20BP86481 221 aa8.3□□□□□ -1.08
MRPL42-205ENST00000549561 PRR20AP86496 221 aa8.3□□□□□ -1.08
MRPL42-205ENST00000549561 BANK1Q8NDB2 785 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms