RNA–Protein interactions for RNA: ENST00000546328.1

ACACB-215, Transcript of acetyl-CoA carboxylase beta, human

TSL 3

Gene ACACB, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACB-215	ENST00000546328	TECPR2	O15040	1411 aa		11.31	□□□□□ -0.6
ACACB-215	ENST00000546328	NCOA3	Q9Y6Q9	1424 aa		11.31	□□□□□ -0.6
ACACB-215	ENST00000546328	SPATA31A6	Q5VVP1	1343 aa		11.31	□□□□□ -0.6
ACACB-215	ENST00000546328	DLC1	Q96QB1	1528 aa		11.3	□□□□□ -0.6
ACACB-215	ENST00000546328	LRPPRC	P42704	1394 aa	Known RBP	11.3	□□□□□ -0.6
ACACB-215	ENST00000546328	XRN1	Q8IZH2	1706 aa	Known RBP	11.3	□□□□□ -0.6
ACACB-215	ENST00000546328	MEX3C	Q5U5Q3	659 aa	Known RBP	11.3	□□□□□ -0.6
ACACB-215	ENST00000546328	BRINP3	Q76B58	766 aa		11.3	□□□□□ -0.6
ACACB-215	ENST00000546328	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
ACACB-215	ENST00000546328	ABCC11	Q96J66	1382 aa		11.29	□□□□□ -0.6
ACACB-215	ENST00000546328	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.29	□□□□□ -0.6
ACACB-215	ENST00000546328	ATF3	P18847	181 aa		11.29	□□□□□ -0.6
ACACB-215	ENST00000546328	CADPS2	Q86UW7	1296 aa		11.29	□□□□□ -0.6
ACACB-215	ENST00000546328	SIRT1	Q96EB6	747 aa		11.29	□□□□□ -0.6
ACACB-215	ENST00000546328	AMOTL2	Q9Y2J4	779 aa		11.29	□□□□□ -0.6
ACACB-215	ENST00000546328	MET	P08581	1390 aa		11.28	□□□□□ -0.6
ACACB-215	ENST00000546328	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.28	□□□□□ -0.6
ACACB-215	ENST00000546328	NUTM2E	B1AL46	878 aa	Predicted RBP	11.28	□□□□□ -0.6
ACACB-215	ENST00000546328	NBPF1	Q3BBV0	1214 aa		11.28	□□□□□ -0.6
ACACB-215	ENST00000546328	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.28	□□□□□ -0.6
ACACB-215	ENST00000546328	CARD11	Q9BXL7	1154 aa		11.28	□□□□□ -0.6
ACACB-215	ENST00000546328	EIF3A	Q14152	1382 aa	Known RBP	11.28	□□□□□ -0.6
ACACB-215	ENST00000546328	PTCH1	Q13635	1447 aa		11.27	□□□□□ -0.6
ACACB-215	ENST00000546328	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.27	□□□□□ -0.61
ACACB-215	ENST00000546328	ZNF772	Q68DY9	489 aa	Predicted RBP	11.27	□□□□□ -0.61
ACACB-215	ENST00000546328	DDX17	Q92841	729 aa	Known RBP	11.27	□□□□□ -0.61
ACACB-215	ENST00000546328	MST1R	Q04912	1400 aa		11.26	□□□□□ -0.61
ACACB-215	ENST00000546328	SLC24A1	O60721	1099 aa		11.25	□□□□□ -0.61
ACACB-215	ENST00000546328	TMEM132E	Q6IEE7	984 aa		11.25	□□□□□ -0.61
ACACB-215	ENST00000546328	USP47	Q96K76	1375 aa		11.25	□□□□□ -0.61
ACACB-215	ENST00000546328	SBNO2	Q9Y2G9	1366 aa		11.25	□□□□□ -0.61
ACACB-215	ENST00000546328	NHSL1	Q5SYE7	1610 aa		11.24	□□□□□ -0.61
ACACB-215	ENST00000546328	RXRB	P28702	533 aa		11.24	□□□□□ -0.61
ACACB-215	ENST00000546328	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
ACACB-215	ENST00000546328	AFF2	P51816	1311 aa		11.24	□□□□□ -0.61
ACACB-215	ENST00000546328	DCC	P43146	1447 aa		11.24	□□□□□ -0.61
ACACB-215	ENST00000546328	RGS12	O14924	1447 aa		11.22	□□□□□ -0.61
ACACB-215	ENST00000546328	NALCN	Q8IZF0	1738 aa		11.22	□□□□□ -0.61
ACACB-215	ENST00000546328	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.22	□□□□□ -0.61
ACACB-215	ENST00000546328	QRICH2	Q9H0J4	1663 aa		11.21	□□□□□ -0.61
ACACB-215	ENST00000546328	PNPLA6	Q8IY17	1366 aa		11.21	□□□□□ -0.61
ACACB-215	ENST00000546328	ROBO2	Q9HCK4	1378 aa		11.21	□□□□□ -0.61
ACACB-215	ENST00000546328	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.21	□□□□□ -0.61
ACACB-215	ENST00000546328	TRAK1	Q9UPV9	953 aa		11.21	□□□□□ -0.61
ACACB-215	ENST00000546328	ADGRB2	O60241	1585 aa		11.2	□□□□□ -0.62
ACACB-215	ENST00000546328	ADGRL3	Q9HAR2	1447 aa		11.2	□□□□□ -0.62
ACACB-215	ENST00000546328	C8orf37	Q96NL8	207 aa		11.2	□□□□□ -0.62
ACACB-215	ENST00000546328	STK26	Q9P289	416 aa		11.2	□□□□□ -0.62
ACACB-215	ENST00000546328	EP400	Q96L91	3159 aa		11.2	□□□□□ -0.62
ACACB-215	ENST00000546328	LRRC59	Q96AG4	307 aa	Known RBP	11.19	□□□□□ -0.62
ACACB-215	ENST00000546328	ST20-MTHFS	A0A0A6YYL1	179 aa		11.18	□□□□□ -0.62
ACACB-215	ENST00000546328	HSPA5	P11021	654 aa	Known RBP	11.18	□□□□□ -0.62
ACACB-215	ENST00000546328	PRAM1	Q96QH2	718 aa		11.18	□□□□□ -0.62
ACACB-215	ENST00000546328	QTRT2	Q9H974	415 aa	Known RBP	11.18	□□□□□ -0.62
ACACB-215	ENST00000546328	POGK	Q9P215	609 aa		11.18	□□□□□ -0.62
ACACB-215	ENST00000546328	ADAMTS2	O95450	1211 aa		11.17	□□□□□ -0.62
ACACB-215	ENST00000546328	TESK2	Q96S53	571 aa		11.17	□□□□□ -0.62
ACACB-215	ENST00000546328	C1orf167	Q5SNV9	1468 aa		11.17	□□□□□ -0.62
ACACB-215	ENST00000546328	CDC42BPG	Q6DT37	1551 aa		11.16	□□□□□ -0.62
ACACB-215	ENST00000546328	RBM6	P78332	1123 aa	Known RBP	11.16	□□□□□ -0.62
ACACB-215	ENST00000546328	PUS7	Q96PZ0	661 aa	Known RBP	11.16	□□□□□ -0.62
ACACB-215	ENST00000546328	ORAI2	Q96SN7	254 aa		11.16	□□□□□ -0.62
ACACB-215	ENST00000546328	PLEKHH1	Q9ULM0	1364 aa		11.16	□□□□□ -0.62
ACACB-215	ENST00000546328	CDCA8	Q53HL2	280 aa		11.15	□□□□□ -0.62
ACACB-215	ENST00000546328	WAPL	Q7Z5K2	1190 aa		11.15	□□□□□ -0.62
ACACB-215	ENST00000546328	NGLY1	Q96IV0	654 aa		11.15	□□□□□ -0.62
ACACB-215	ENST00000546328	TMF1	P82094	1093 aa		11.14	□□□□□ -0.63
ACACB-215	ENST00000546328	TULP4	Q9NRJ4	1543 aa		11.14	□□□□□ -0.63
ACACB-215	ENST00000546328	SOS2	Q07890	1332 aa	Predicted RBP	11.13	□□□□□ -0.63
ACACB-215	ENST00000546328	EVC2	Q86UK5	1308 aa		11.13	□□□□□ -0.63
ACACB-215	ENST00000546328	FMN2	Q9NZ56	1722 aa		11.13	□□□□□ -0.63
ACACB-215	ENST00000546328	ANKAR	Q7Z5J8	1434 aa		11.11	□□□□□ -0.63
ACACB-215	ENST00000546328	WASL	O00401	505 aa	Predicted RBP	11.11	□□□□□ -0.63
ACACB-215	ENST00000546328	USP21	Q9UK80	565 aa		11.11	□□□□□ -0.63
ACACB-215	ENST00000546328	ITSN1	Q15811	1721 aa		11.11	□□□□□ -0.63
ACACB-215	ENST00000546328	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.1	□□□□□ -0.63
ACACB-215	ENST00000546328	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
ACACB-215	ENST00000546328	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.1	□□□□□ -0.63
ACACB-215	ENST00000546328	ATAD2	Q6PL18	1390 aa		11.1	□□□□□ -0.63
ACACB-215	ENST00000546328	NINL	Q9Y2I6	1382 aa		11.1	□□□□□ -0.63
ACACB-215	ENST00000546328	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.09	□□□□□ -0.63
ACACB-215	ENST00000546328	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.09	□□□□□ -0.63
ACACB-215	ENST00000546328	ATRN	O75882	1429 aa		11.09	□□□□□ -0.63
ACACB-215	ENST00000546328	TOPAZ1	Q8N9V7	1692 aa		11.08	□□□□□ -0.64
ACACB-215	ENST00000546328	ATP7B	P35670	1465 aa		11.08	□□□□□ -0.64
ACACB-215	ENST00000546328	CCDC7	Q96M83	1385 aa		11.08	□□□□□ -0.64
ACACB-215	ENST00000546328	XPC	Q01831	940 aa	Predicted RBP	11.08	□□□□□ -0.64
ACACB-215	ENST00000546328	CDK19	Q9BWU1	502 aa		11.08	□□□□□ -0.64
ACACB-215	ENST00000546328	USP32	Q8NFA0	1604 aa		11.08	□□□□□ -0.64
ACACB-215	ENST00000546328	BCL9L	Q86UU0	1499 aa		11.07	□□□□□ -0.64
ACACB-215	ENST00000546328	PXDN	Q92626	1479 aa		11.07	□□□□□ -0.64
ACACB-215	ENST00000546328	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.07	□□□□□ -0.64
ACACB-215	ENST00000546328	TRPC5	Q9UL62	973 aa	Predicted RBP	11.07	□□□□□ -0.64
ACACB-215	ENST00000546328	KIF7	Q2M1P5	1343 aa		11.07	□□□□□ -0.64
ACACB-215	ENST00000546328	MYOM1	P52179	1685 aa		11.06	□□□□□ -0.64
ACACB-215	ENST00000546328	SRPK2	P78362	688 aa	Known RBP	11.06	□□□□□ -0.64
ACACB-215	ENST00000546328	ESCO1	Q5FWF5	840 aa		11.06	□□□□□ -0.64
ACACB-215	ENST00000546328	CCDC61	Q9Y6R9	512 aa		11.06	□□□□□ -0.64
ACACB-215	ENST00000546328	WASHC2A	Q641Q2	1341 aa		11.06	□□□□□ -0.64
ACACB-215	ENST00000546328	RGPD8	O14715	1765 aa	Predicted RBP	11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms