RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 FMNL1O95466 1100 aaPredicted RBP5.04□□□□□ -1.6
YBX3-214ENST00000544501 ITGBL1O95965 494 aaPredicted RBP5.04□□□□□ -1.6
YBX3-214ENST00000544501 COPS2P61201 443 aa5.04□□□□□ -1.6
YBX3-214ENST00000544501 GUCA2AQ02747 115 aa5.04□□□□□ -1.6
YBX3-214ENST00000544501 MTMR2Q13614 643 aa5.04□□□□□ -1.6
YBX3-214ENST00000544501 BRICD5Q6PL45 260 aa5.04□□□□□ -1.6
YBX3-214ENST00000544501 HLA-CQ95604 372 aa5.04□□□□□ -1.6
YBX3-214ENST00000544501 THAP11Q96EK4 314 aa5.04□□□□□ -1.6
YBX3-214ENST00000544501 ATP1B4Q9UN42 357 aaPredicted RBP5.04□□□□□ -1.6
YBX3-214ENST00000544501 C6orf229H3BNL8 230 aa5.03□□□□□ -1.6
YBX3-214ENST00000544501 HRCP23327 699 aa5.03□□□□□ -1.6
YBX3-214ENST00000544501 RETREG3Q86VR2 466 aa5.03□□□□□ -1.6
YBX3-214ENST00000544501 NUTM2BA6NNL0 878 aaPredicted RBP5.02□□□□□ -1.61
YBX3-214ENST00000544501 NUTM2EB1AL46 878 aaPredicted RBP5.02□□□□□ -1.61
YBX3-214ENST00000544501 KCNC4Q03721 635 aa5.02□□□□□ -1.61
YBX3-214ENST00000544501 QPCTQ16769 361 aa5.02□□□□□ -1.61
YBX3-214ENST00000544501 CSPP1Q1MSJ5 1256 aa5.02□□□□□ -1.61
YBX3-214ENST00000544501 NUTM2DQ5VT03 806 aaPredicted RBP5.02□□□□□ -1.61
YBX3-214ENST00000544501 NUTM2AQ8IVF1 878 aaPredicted RBP5.02□□□□□ -1.61
YBX3-214ENST00000544501 SPSB2Q99619 263 aa5.02□□□□□ -1.61
YBX3-214ENST00000544501 USB1Q9BQ65 265 aaKnown RBP5.02□□□□□ -1.61
YBX3-214ENST00000544501 ADH1BP00325 375 aa5.01□□□□□ -1.61
YBX3-214ENST00000544501 RFC5P40937 340 aa5.01□□□□□ -1.61
YBX3-214ENST00000544501 MSS51Q4VC12 460 aa5.01□□□□□ -1.61
YBX3-214ENST00000544501 TMEM259Q4ZIN3 620 aa5.01□□□□□ -1.61
YBX3-214ENST00000544501 IFFO2Q5TF58 517 aa5.01□□□□□ -1.61
YBX3-214ENST00000544501 DESI1Q6ICB0 168 aa5.01□□□□□ -1.61
YBX3-214ENST00000544501 RNF19BQ6ZMZ0 732 aa5.01□□□□□ -1.61
YBX3-214ENST00000544501 RTL5Q5HYW3 569 aaPredicted RBP5□□□□□ -1.61
YBX3-214ENST00000544501 BANK1Q8NDB2 785 aa5□□□□□ -1.61
YBX3-214ENST00000544501 PRR7Q8TB68 274 aa5□□□□□ -1.61
YBX3-214ENST00000544501 CABLES1Q8TDN4 633 aa5□□□□□ -1.61
YBX3-214ENST00000544501 ZNF516Q92618 1163 aa5□□□□□ -1.61
YBX3-214ENST00000544501 FBXO31Q5XUX0 539 aaPredicted RBP4.99□□□□□ -1.61
YBX3-214ENST00000544501 FAM160A2Q8N612 972 aaPredicted RBP4.99□□□□□ -1.61
YBX3-214ENST00000544501 SYMPKQ92797 1274 aaKnown RBP4.99□□□□□ -1.61
YBX3-214ENST00000544501 GTF3C3Q9Y5Q9 886 aa4.99□□□□□ -1.61
YBX3-214ENST00000544501 CFAP99D6REC4 459 aa4.98□□□□□ -1.61
YBX3-214ENST00000544501 SOCS7O14512 581 aa4.98□□□□□ -1.61
YBX3-214ENST00000544501 MMP16P51512 607 aa4.98□□□□□ -1.61
YBX3-214ENST00000544501 HELBQ8NG08 1087 aaPredicted RBP4.98□□□□□ -1.61
YBX3-214ENST00000544501 TLL1O43897 1013 aa4.97□□□□□ -1.61
YBX3-214ENST00000544501 DXOO77932 396 aaKnown RBP4.97□□□□□ -1.61
YBX3-214ENST00000544501 JUNDP17535 347 aa4.97□□□□□ -1.61
YBX3-214ENST00000544501 FLIIQ13045 1269 aa4.97□□□□□ -1.61
YBX3-214ENST00000544501 NKX2-3Q8TAU0 364 aa4.97□□□□□ -1.61
YBX3-214ENST00000544501 SLC6A16Q9GZN6 736 aa4.97□□□□□ -1.61
YBX3-214ENST00000544501 AP1G2O75843 785 aa4.96□□□□□ -1.62
YBX3-214ENST00000544501 GGCXP38435 758 aa4.96□□□□□ -1.62
YBX3-214ENST00000544501 PTPRNQ16849 979 aa4.96□□□□□ -1.62
YBX3-214ENST00000544501 LYPD8Q6UX82 237 aa4.96□□□□□ -1.62
YBX3-214ENST00000544501 APBB1O00213 710 aa4.95□□□□□ -1.62
YBX3-214ENST00000544501 CTDSPL2Q05D32 466 aa4.95□□□□□ -1.62
YBX3-214ENST00000544501 PLA2G2EQ9NZK7 142 aa4.95□□□□□ -1.62
YBX3-214ENST00000544501 S1PR4O95977 384 aa4.94□□□□□ -1.62
YBX3-214ENST00000544501 USP17L8P0C7I0 530 aa4.94□□□□□ -1.62
YBX3-214ENST00000544501 ERICH6Q7L0X2 663 aa4.94□□□□□ -1.62
YBX3-214ENST00000544501 TSC1Q92574 1164 aa4.94□□□□□ -1.62
YBX3-214ENST00000544501 PRDM9Q9NQV7 894 aa4.94□□□□□ -1.62
YBX3-214ENST00000544501 EVA1BQ9NVM1 165 aa4.94□□□□□ -1.62
YBX3-214ENST00000544501 PER1O15534 1290 aaPredicted RBP4.93□□□□□ -1.62
YBX3-214ENST00000544501 CCNYL3P0C7X3 344 aa4.93□□□□□ -1.62
YBX3-214ENST00000544501 MCM6Q14566 821 aa4.93□□□□□ -1.62
YBX3-214ENST00000544501 PPP1R18Q6NYC8 613 aa4.93□□□□□ -1.62
YBX3-214ENST00000544501 ANKLE1Q8NAG6 615 aa4.93□□□□□ -1.62
YBX3-214ENST00000544501 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.93□□□□□ -1.62
YBX3-214ENST00000544501 PLSCR2Q9NRY7 297 aa4.93□□□□□ -1.62
YBX3-214ENST00000544501 RNF223E7ERA6 249 aa4.92□□□□□ -1.62
YBX3-214ENST00000544501 NUDT12Q9BQG2 462 aa4.92□□□□□ -1.62
YBX3-214ENST00000544501 PRM3Q9NNZ6 103 aa4.92□□□□□ -1.62
YBX3-214ENST00000544501 SNRKQ9NRH2 765 aa4.92□□□□□ -1.62
YBX3-214ENST00000544501 A0A0G2JS52 829 aa4.91□□□□□ -1.62
YBX3-214ENST00000544501 F12P00748 615 aaPredicted RBP4.91□□□□□ -1.62
YBX3-214ENST00000544501 KCNH2Q12809 1159 aa4.91□□□□□ -1.62
YBX3-214ENST00000544501 MTMR14Q8NCE2 650 aa4.91□□□□□ -1.62
YBX3-214ENST00000544501 LRRN4Q8WUT4 740 aa4.91□□□□□ -1.62
YBX3-214ENST00000544501 FCF1Q9Y324 198 aaKnown RBP4.91□□□□□ -1.62
YBX3-214ENST00000544501 PNMA1Q8ND90 353 aa4.9□□□□□ -1.63
YBX3-214ENST00000544501 ARMC2Q8NEN0 867 aa4.9□□□□□ -1.63
YBX3-214ENST00000544501 PPEF1O14829 653 aaPredicted RBP4.89□□□□□ -1.63
YBX3-214ENST00000544501 CTHP32929 405 aa4.89□□□□□ -1.63
YBX3-214ENST00000544501 RPIAP49247 311 aa4.89□□□□□ -1.63
YBX3-214ENST00000544501 CCDC24Q8N4L8 307 aa4.89□□□□□ -1.63
YBX3-214ENST00000544501 GJD4Q96KN9 370 aaPredicted RBP4.89□□□□□ -1.63
YBX3-214ENST00000544501 TRIM34Q9BYJ4 488 aa4.89□□□□□ -1.63
YBX3-214ENST00000544501 HMX1Q9NP08 348 aaPredicted RBP4.89□□□□□ -1.63
YBX3-214ENST00000544501 NDUFB9Q9Y6M9 179 aa4.89□□□□□ -1.63
YBX3-214ENST00000544501 ZBTB24O43167 697 aaPredicted RBP4.88□□□□□ -1.63
YBX3-214ENST00000544501 UBTFP17480 764 aaKnown RBP4.88□□□□□ -1.63
YBX3-214ENST00000544501 NR6A1Q15406 480 aa4.88□□□□□ -1.63
YBX3-214ENST00000544501 GPKOWQ92917 476 aaPredicted RBP eCLIP4.88□□□□□ -1.63
YBX3-214ENST00000544501 UNC93B1Q9H1C4 597 aa4.88□□□□□ -1.63
YBX3-214ENST00000544501 MAP10Q9P2G4 905 aa4.88□□□□□ -1.63
YBX3-214ENST00000544501 ZC3H4Q9UPT8 1303 aaKnown RBP4.88□□□□□ -1.63
YBX3-214ENST00000544501 RAD21O60216 631 aa4.87□□□□□ -1.63
YBX3-214ENST00000544501 PTCRAQ6ISU1 281 aaPredicted RBP4.87□□□□□ -1.63
YBX3-214ENST00000544501 FKBPLQ9UIM3 349 aa4.87□□□□□ -1.63
YBX3-214ENST00000544501 A6NJR5 290 aa4.86□□□□□ -1.63
YBX3-214ENST00000544501 RGS20O76081 388 aa4.86□□□□□ -1.63
YBX3-214ENST00000544501 CD2BP2O95400 341 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms